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The map label for this gene is pilQ [H]

Identifier: 84622715

GI number: 84622715

Start: 1152205

End: 1154154

Strand: Direct

Name: pilQ [H]

Synonym: XOO_1058

Alternate gene names: 84622715

Gene position: 1152205-1154154 (Clockwise)

Preceding gene: 84622714

Following gene: 84622718

Centisome position: 23.32

GC content: 61.38

Gene sequence:

>1950_bases
ATGACGTTTTCCAATGCCCAGCGGCTGCGTCCGGTACGACGCCACGCGATCTTCCAGGCCTGCGCGTTGGGGTTCGCGCT
GGCACTGGCGAGCGGCAGCGCATTCGCCGCAGCGGCGCTGACTCAGCCCGCGCAGGATCCGGCCAAGGTCGCTCCGGCGA
GCCTGGCGGTGTCCAAAATCGATTTCAAACGCGGCGAAGACGGCACTGGCCGTCTGATCCTGCAGTTCAACGGCCAGGGG
GCCAGCCCGGACCTGCGGACACAGGGCGACAACGTGCTGGTGGACATCAGCAACGCCAGGTTGCCGGCCGAGCTGCAACG
CCCGCTCAACGTCACCGACTTCGCAACGCCGGTGCAGCGTGTGGAAGTGAAGCCGTCGGGCTCCGGTTCGCAGTTGGTGC
TGTCGACCAAGGGCGCCTTCGATTCGCTGGCCTACCAGACCGGTAACGAATACGTGGTCGAAATCACCCCACGCAAGGGC
CAGCCGGCGGTTGGCGGTGTGAGCCCGGCCGCAGTCACCCAGGCTGCCGCGCAGATCGCCGCGCGCGGCTACAGCGGTCG
CCCGGTGACGTTCAACTTCCAGGACGTGCCGGTACGCACCGTGCTGCAGCTGATCGCCGAGGAGTCCAATCTCAACATCG
TTGCCTCCGACACCGTGCAGGGCAATGTCACATTGCGCCTGATGAACGTGCCGTGGGACCAGGCGCTGGACATCGTCCTG
CGTGCCAAGGGCCTGGACAAGCGCCGCGACGGTGGCGTGGTGTGGGTCGCCCCGCAGCCGGAGTTGGCCAAGTTCGAGCA
GGACAAGGAAGACGCCCGCATCGCGATCGAGAATCGCGAGGATTTGATCACCGATTACGTGCAGATCAATTACCACAATG
CGGCGGTGATCTTTAAGGCGCTGACCGAGGCTAAGGGAATTGGCGGTGGTGGTGGTAGTGGCGGTGGCCAGGGCGGACAA
GGTGGTGCCGGGCAGCAGGACAATGGCTTCCTGTCGCCGCGCGGCCGTTTGGTTGCCGATGAACGCACAAATACCTTGAT
GATCAGCGATATTCCGAAAAAGGTCGCGCAGATGCGTGAACTGATTTCGCATATCGATCGCCCGGTGGATCAGGTGCTGA
TTGAGAGCCGGATCGTCATTGCGACTGATACCTTTGCGCGCGATCTGGGCGCCCGCTTTGGCATTATCGGCGCGACAGGT
CGCGGCATTCTCAGTGGTTCGCTCGATAGCAACACCAACTATCTGAACACTTCGGCGAAGCGGGCCAGCGAGATCGCCAA
TGGAGGCACCAGCACCACGCTGCCTGCGCATCTGTTCCCGTCCGGACTGAATGTCAATCTCGGTGCAGGCGGTGGATTCA
CCACCAACACGCCTGGCGGCCTCGCCTACACCTTGCTGGGTTCCAATTTCAATCTGGATATCGAGTTGTCGGCGATGCAG
CAAGAGGGACGTGGCGAAGTCGTATCGAACCCGCGCATCGTTACCGCGAATCAGCGCGAGGGCGTGATCAAGCAGGGCCG
GGAGATCGGCTATGTGACCATCAGCGGCAGTGGTGCGGGCGGCGGTTCGCAGGCCAACGTGCAGTTCAAGGAAGTGCTGC
TTGAACTCAAGGTGACGCCAACCATCACCAATGACAATCGGGTCTTTCTTAACATGAATGTCAAGAAGGACGAGGTTGCA
CGGCTCATCGATTTGCCATTGTATGGAACGGTGCCGGAGATCAATCGTCGGGAGATCAATACCGCCGTGCTGGTCGGAGA
TGGTGAAACCGTGGTGATCGGTGGTGTCTACGAATTCACCGATCGCGAGAGCGTCTCCAAGGTGCCGTTCCTGGGCGACA
TCCCGTTCCTGGGCAACTTGTTCAAAAAGCGTGGTCGTAGCAAGGAAAAGGCTGAGCTCCTTGTATTTGTCACGCCCAAG
GTGCTCCGTGTGGCTAGCGCAACCCGCTAA

Upstream 100 bases:

>100_bases
ATCGAGCTGATTGAACTTGTGCCGGACGGTGCGGGTGGATGGCTTGAACGGCCGGCCGCACTCGCATTGGGTGATCAATA
AAGTGATAGGGGATAGCACG

Downstream 100 bases:

>100_bases
ATCTTGACTGGTTTAAAGAAAAGAGGTCGCGAAGGCGGCCTCTTTTCCATTGTGGCGCATGAGAACCTGTTCACGATCTC
CTGAGCAGCAGTGCCAGGAA

Product: fimbrial assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MTFSNAQRLRPVRRHAIFQACALGFALALASGSAFAAAALTQPAQDPAKVAPASLAVSKIDFKRGEDGTGRLILQFNGQG
ASPDLRTQGDNVLVDISNARLPAELQRPLNVTDFATPVQRVEVKPSGSGSQLVLSTKGAFDSLAYQTGNEYVVEITPRKG
QPAVGGVSPAAVTQAAAQIAARGYSGRPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMNVPWDQALDIVL
RAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAVIFKALTEAKGIGGGGGSGGGQGGQ
GGAGQQDNGFLSPRGRLVADERTNTLMISDIPKKVAQMRELISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATG
RGILSGSLDSNTNYLNTSAKRASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDIELSAMQ
QEGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLLELKVTPTITNDNRVFLNMNVKKDEVA
RLIDLPLYGTVPEINRREINTAVLVGDGETVVIGGVYEFTDRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPK
VLRVASATR

Sequences:

>Translated_649_residues
MTFSNAQRLRPVRRHAIFQACALGFALALASGSAFAAAALTQPAQDPAKVAPASLAVSKIDFKRGEDGTGRLILQFNGQG
ASPDLRTQGDNVLVDISNARLPAELQRPLNVTDFATPVQRVEVKPSGSGSQLVLSTKGAFDSLAYQTGNEYVVEITPRKG
QPAVGGVSPAAVTQAAAQIAARGYSGRPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMNVPWDQALDIVL
RAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAVIFKALTEAKGIGGGGGSGGGQGGQ
GGAGQQDNGFLSPRGRLVADERTNTLMISDIPKKVAQMRELISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATG
RGILSGSLDSNTNYLNTSAKRASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDIELSAMQ
QEGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLLELKVTPTITNDNRVFLNMNVKKDEVA
RLIDLPLYGTVPEINRREINTAVLVGDGETVVIGGVYEFTDRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPK
VLRVASATR
>Mature_648_residues
TFSNAQRLRPVRRHAIFQACALGFALALASGSAFAAAALTQPAQDPAKVAPASLAVSKIDFKRGEDGTGRLILQFNGQGA
SPDLRTQGDNVLVDISNARLPAELQRPLNVTDFATPVQRVEVKPSGSGSQLVLSTKGAFDSLAYQTGNEYVVEITPRKGQ
PAVGGVSPAAVTQAAAQIAARGYSGRPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMNVPWDQALDIVLR
AKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAVIFKALTEAKGIGGGGGSGGGQGGQG
GAGQQDNGFLSPRGRLVADERTNTLMISDIPKKVAQMRELISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATGR
GILSGSLDSNTNYLNTSAKRASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDIELSAMQQ
EGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLLELKVTPTITNDNRVFLNMNVKKDEVAR
LIDLPLYGTVPEINRREINTAVLVGDGETVVIGGVYEFTDRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPKV
LRVASATR

Specific function: Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a "porthole" allowing passage of the fimbrae through the outer membrane [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=466, Percent_Identity=29.6137339055794, Blast_Score=192, Evalue=5e-50,
Organism=Escherichia coli, GI87082242, Length=307, Percent_Identity=29.6416938110749, Blast_Score=109, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR013355
- InterPro:   IPR011662
- InterPro:   IPR004846
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N; PF07660 STN [H]

EC number: NA

Molecular weight: Translated: 68993; Mature: 68862

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00875 T2SP_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSNAQRLRPVRRHAIFQACALGFALALASGSAFAAAALTQPAQDPAKVAPASLAVSKI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHCCHHHEEEEE
DFKRGEDGTGRLILQFNGQGASPDLRTQGDNVLVDISNARLPAELQRPLNVTDFATPVQR
ECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHCCCCCE
VEVKPSGSGSQLVLSTKGAFDSLAYQTGNEYVVEITPRKGQPAVGGVSPAAVTQAAAQIA
EEECCCCCCCEEEEEECCCHHHHHEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
ARGYSGRPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMNVPWDQALDIVL
HCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEECCEECEEEEEEEECCHHHHHHHHH
RAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAVIFKA
EECCCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEEECCHHHEEEEEEEEECCHHHHHHH
LTEAKGIGGGGGSGGGQGGQGGAGQQDNGFLSPRGRLVADERTNTLMISDIPKKVAQMRE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCEEEEEHHHHHHHHHHH
LISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATGRGILSGSLDSNTNYLNTSAK
HHHHHCCCHHHHHHHCEEEEEECHHHHHHCCCEEEEECCCCCEEECCCCCCCCEECCHHH
RASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDIELSAMQ
HHHHHHCCCCCCCCCHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC
QEGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLLELKVTP
CCCCCCEECCCEEEECCCCCCHHHCCCEEEEEEEECCCCCCCCCCCEEHHEEEEEEEEEE
TITNDNRVFLNMNVKKDEVARLIDLPLYGTVPEINRREINTAVLVGDGETVVIGGVYEFT
EEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEECCEEEEEECCCEEEEECEEECC
DRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPKVLRVASATR
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCCC
>Mature Secondary Structure 
TFSNAQRLRPVRRHAIFQACALGFALALASGSAFAAAALTQPAQDPAKVAPASLAVSKI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHCCHHHEEEEE
DFKRGEDGTGRLILQFNGQGASPDLRTQGDNVLVDISNARLPAELQRPLNVTDFATPVQR
ECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHCCCCCE
VEVKPSGSGSQLVLSTKGAFDSLAYQTGNEYVVEITPRKGQPAVGGVSPAAVTQAAAQIA
EEECCCCCCCEEEEEECCCHHHHHEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
ARGYSGRPVTFNFQDVPVRTVLQLIAEESNLNIVASDTVQGNVTLRLMNVPWDQALDIVL
HCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEECCEECEEEEEEEECCHHHHHHHHH
RAKGLDKRRDGGVVWVAPQPELAKFEQDKEDARIAIENREDLITDYVQINYHNAAVIFKA
EECCCCCCCCCCEEEECCCCHHHHHCCCCCCCEEEEECCHHHEEEEEEEEECCHHHHHHH
LTEAKGIGGGGGSGGGQGGQGGAGQQDNGFLSPRGRLVADERTNTLMISDIPKKVAQMRE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCEEEEEHHHHHHHHHHH
LISHIDRPVDQVLIESRIVIATDTFARDLGARFGIIGATGRGILSGSLDSNTNYLNTSAK
HHHHHCCCHHHHHHHCEEEEEECHHHHHHCCCEEEEECCCCCEEECCCCCCCCEECCHHH
RASEIANGGTSTTLPAHLFPSGLNVNLGAGGGFTTNTPGGLAYTLLGSNFNLDIELSAMQ
HHHHHHCCCCCCCCCHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC
QEGRGEVVSNPRIVTANQREGVIKQGREIGYVTISGSGAGGGSQANVQFKEVLLELKVTP
CCCCCCEECCCEEEECCCCCCHHHCCCEEEEEEEECCCCCCCCCCCEEHHEEEEEEEEEE
TITNDNRVFLNMNVKKDEVARLIDLPLYGTVPEINRREINTAVLVGDGETVVIGGVYEFT
EEECCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCEECCEEEEEECCCEEEEECEEECC
DRESVSKVPFLGDIPFLGNLFKKRGRSKEKAELLVFVTPKVLRVASATR
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7901733; 10984043 [H]