Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84622714

Identifier: 84622714

GI number: 84622714

Start: 1151652

End: 1152185

Strand: Direct

Name: 84622714

Synonym: XOO_1057

Alternate gene names: NA

Gene position: 1151652-1152185 (Clockwise)

Preceding gene: 84622713

Following gene: 84622715

Centisome position: 23.31

GC content: 64.42

Gene sequence:

>534_bases
ATGACCATGAAACTGCTCAAGATCCTATCCTGCGTGGCGCTAATGGCAGTACTGCCGGCGTGCACGCGCGGTGTGACCAG
CACACCGGGCGACGCGCCGAATCTGGAAGCCTGGGTTGCCGAGGTGCGCGCGCGTCCTGCGCCGCCGCTGGAACCATTGC
CTGTGATGCAGCAATTCGAGACGTTCGAATATGCCGCGCAGGCGATGCGCGACCCGTTCAGCGATGCCTGGGTCAGCGCG
GAAGGTGGCAACGGCACGCGTCCGGATCCGAACCGGCGCAAGGAACCGTTGGAAGCCTTTCCGCTCGACGCCCTCGACAT
GGTGGGGACCATTGGCGGCGGTTCGGGCCTGATCGCTCTGGTGATGGCGCCTGACAAGGTGACCTACCGGGTGCGGCCGG
GTGTGTATCTGGGACAGAGCGATGGCCGGGTGACCGGGGTCTACGAAGACCGCATCGAGCTGATTGAACTTGTGCCGGAC
GGTGCGGGTGGATGGCTTGAACGGCCGGCCGCACTCGCATTGGGTGATCAATAA

Upstream 100 bases:

>100_bases
TGGAACTGTCCGGCACGGTCAAGACCTATCGTTATCTTGACGATGAGGAAATGGCCGAGCAGGAAAAGGCTGCAGCCAAC
GCTGCGAAGAAGGGCGGCCA

Downstream 100 bases:

>100_bases
AGTGATAGGGGATAGCACGATGACGTTTTCCAATGCCCAGCGGCTGCGTCCGGTACGACGCCACGCGATCTTCCAGGCCT
GCGCGTTGGGGTTCGCGCTG

Product: fimbrial assembly protein

Products: NA

Alternate protein names: Pilus Assembly Protein PilQ; Type 4 Fimbrial Biogenesis Protein PilP; Type IV Pilus Biogenesis Protein PilP; Type IV Pilus Assembly Protein PilP; Fimbrial Assembly Protein; Lipoprotein; Tfp Pilus Assembly Protein PilP; Fimbrial Assembly Protein PilP; Pilus Assembly Protein; Type IV Pilus Assembly Protein Pilp; Type IV Pilus Assembly; Pilus Assembly Protein Pilp; Fimbriae Biogenesis-Related Fusion Protein; Type IV Fimbrial Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTMKLLKILSCVALMAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFETFEYAAQAMRDPFSDAWVSA
EGGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIALVMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPD
GAGGWLERPAALALGDQ

Sequences:

>Translated_177_residues
MTMKLLKILSCVALMAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFETFEYAAQAMRDPFSDAWVSA
EGGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIALVMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPD
GAGGWLERPAALALGDQ
>Mature_176_residues
TMKLLKILSCVALMAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFETFEYAAQAMRDPFSDAWVSAE
GGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIALVMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPDG
AGGWLERPAALALGDQ

Specific function: Unknown

COG id: COG3168

COG function: function code NU; Tfp pilus assembly protein PilP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18934; Mature: 18803

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKLLKILSCVALMAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
TFEYAAQAMRDPFSDAWVSAEGGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIAL
HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCEEEE
VMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPDGAGGWLERPAALALGDQ
EECCCCEEEEECCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TMKLLKILSCVALMAVLPACTRGVTSTPGDAPNLEAWVAEVRARPAPPLEPLPVMQQFE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
TFEYAAQAMRDPFSDAWVSAEGGNGTRPDPNRRKEPLEAFPLDALDMVGTIGGGSGLIAL
HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCEEEE
VMAPDKVTYRVRPGVYLGQSDGRVTGVYEDRIELIELVPDGAGGWLERPAALALGDQ
EECCCCEEEEECCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA