| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621976
Identifier: 84621976
GI number: 84621976
Start: 350933
End: 351511
Strand: Direct
Name: 84621976
Synonym: XOO_0319
Alternate gene names: NA
Gene position: 350933-351511 (Clockwise)
Preceding gene: 84621972
Following gene: 84621981
Centisome position: 7.1
GC content: 64.42
Gene sequence:
>579_bases ATGCTGAGGCAGGTCCCCCGTTCGCAGAATGCTCCGATGACACCTACTTCTTCGCTCGCTGCCACGCGCAGCCTGGCTCG CCGGTTGCTGCTGGCGGCCATGCTGGCCGTGGCCGCCCCGGCCGCATTGGCGCAAGCGCCCAGTGATGCCGACATCAACC GTCTGCTGGCCGCATCGCGCGCGCAGACCATGCTGGACACGATGCTGCCGCAGATCGAAGCGATGCAGCAGCAGCAATTT GCCCAGCTCACCGCGCAACGCCAACTCGACGCCGACCAACAAGCCCAGCTGCAACGCATCCAGGAACGCACCCGCCAGAC CGTGCGCAAGGCGCTGTCGTGGTCGGAGCTGCGGCCAACGTATGTGGACATCTACAAGCGCTCGTTCTCGCGCGAGGATG TGCTGGCCATGGCCGAGTTCTACGAGAGCTCAGCCGGCCAAAGCCTGCTCGACAAGACCCCGGCCCTGACCCAGAACCTG ATGGGCGCGATCCAACAGAGGATGCTGCCGCTGTTTGCGGATCTGCAGAAGGATCTGGAGAAGATCGTCAACGCACCTGC TCCGGCCAAAAAGCCCTGA
Upstream 100 bases:
>100_bases GGAATCGTCAGGCTGGGGGTGATCTGGATCGGGTCGCTGGCCATGTGCGCCGATTGTATCGGCAGCGGGGTGGACGCGCG CGCGAACGTCGGCTTCCCGT
Downstream 100 bases:
>100_bases GAGGCGGGGAATCGGGATGGGGGAATCGTAAGAGCGTGCGTTGTTGGGACGTGTAGATCAGTGGCGGAGAGTGGCGAGCG TGTTGGACACGCCACCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLRQVPRSQNAPMTPTSSLAATRSLARRLLLAAMLAVAAPAALAQAPSDADINRLLAASRAQTMLDTMLPQIEAMQQQQF AQLTAQRQLDADQQAQLQRIQERTRQTVRKALSWSELRPTYVDIYKRSFSREDVLAMAEFYESSAGQSLLDKTPALTQNL MGAIQQRMLPLFADLQKDLEKIVNAPAPAKKP
Sequences:
>Translated_192_residues MLRQVPRSQNAPMTPTSSLAATRSLARRLLLAAMLAVAAPAALAQAPSDADINRLLAASRAQTMLDTMLPQIEAMQQQQF AQLTAQRQLDADQQAQLQRIQERTRQTVRKALSWSELRPTYVDIYKRSFSREDVLAMAEFYESSAGQSLLDKTPALTQNL MGAIQQRMLPLFADLQKDLEKIVNAPAPAKKP >Mature_192_residues MLRQVPRSQNAPMTPTSSLAATRSLARRLLLAAMLAVAAPAALAQAPSDADINRLLAASRAQTMLDTMLPQIEAMQQQQF AQLTAQRQLDADQQAQLQRIQERTRQTVRKALSWSELRPTYVDIYKRSFSREDVLAMAEFYESSAGQSLLDKTPALTQNL MGAIQQRMLPLFADLQKDLEKIVNAPAPAKKP
Specific function: Unknown
COG id: COG3184
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21332; Mature: 21332
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQVPRSQNAPMTPTSSLAATRSLARRLLLAAMLAVAAPAALAQAPSDADINRLLAASR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AQTMLDTMLPQIEAMQQQQFAQLTAQRQLDADQQAQLQRIQERTRQTVRKALSWSELRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YVDIYKRSFSREDVLAMAEFYESSAGQSLLDKTPALTQNLMGAIQQRMLPLFADLQKDLE HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVNAPAPAKKP HHHCCCCCCCCC >Mature Secondary Structure MLRQVPRSQNAPMTPTSSLAATRSLARRLLLAAMLAVAAPAALAQAPSDADINRLLAASR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AQTMLDTMLPQIEAMQQQQFAQLTAQRQLDADQQAQLQRIQERTRQTVRKALSWSELRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YVDIYKRSFSREDVLAMAEFYESSAGQSLLDKTPALTQNLMGAIQQRMLPLFADLQKDLE HHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KIVNAPAPAKKP HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA