| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621939
Identifier: 84621939
GI number: 84621939
Start: 310168
End: 310494
Strand: Direct
Name: 84621939
Synonym: XOO_0282
Alternate gene names: NA
Gene position: 310168-310494 (Clockwise)
Preceding gene: 84621932
Following gene: 84621943
Centisome position: 6.28
GC content: 61.16
Gene sequence:
>327_bases GTGACGATCCACGCTGCTTCGTCGCTGCAGGAATCTTCCATGGAGTTGCTGACGCTTGAACACTTTGCCGGCAGCGTCAA CGAGACCTTTGCCGCCGCTTTGAATGAGGGCGAGGTGCCGTTCGTGCTGGTGGAGGCGCGGCCCTTGCAGCACGCGCGCA ATTCGCAACGTGCGCCGTTCTCGTTGCTGTTTCGTAACGGCTCGGCCTTTCTGTTTCCCCAGCAGACCTATCAGATGCGG CATGCGCGGCTCGGCGAGATCGGTATCTTCCTGGTACCGGTGGCGCGCGAGCGCGACGGGTTCCTGTATCAGGCCGTCTT CAATTGA
Upstream 100 bases:
>100_bases GGCGCGTGTGCCGTGCCGTCTTGCCTGTCGCTGTCGCGCGACGATCTGCCGAGCACGTCGCGTTGTCGGCAGCGGCACCT TGTCGAACCGGCCACAAAAC
Downstream 100 bases:
>100_bases ACACGGCCAGCTGCGCGTTCAACTGAGCAGGTGATCGCGCGGATGCCAGTGCATCTGCAGATGGGTCTGGGTGCTGTTGC CTGCAACGAATCCGAGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTIHAASSLQESSMELLTLEHFAGSVNETFAAALNEGEVPFVLVEARPLQHARNSQRAPFSLLFRNGSAFLFPQQTYQMR HARLGEIGIFLVPVARERDGFLYQAVFN
Sequences:
>Translated_108_residues MTIHAASSLQESSMELLTLEHFAGSVNETFAAALNEGEVPFVLVEARPLQHARNSQRAPFSLLFRNGSAFLFPQQTYQMR HARLGEIGIFLVPVARERDGFLYQAVFN >Mature_107_residues TIHAASSLQESSMELLTLEHFAGSVNETFAAALNEGEVPFVLVEARPLQHARNSQRAPFSLLFRNGSAFLFPQQTYQMRH ARLGEIGIFLVPVARERDGFLYQAVFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12110; Mature: 11979
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHAASSLQESSMELLTLEHFAGSVNETFAAALNEGEVPFVLVEARPLQHARNSQRAPF CEECCCCCCCCCCHHEEEHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCHHCCCCCCCCE SLLFRNGSAFLFPQQTYQMRHARLGEIGIFLVPVARERDGFLYQAVFN EEEEECCCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECC >Mature Secondary Structure TIHAASSLQESSMELLTLEHFAGSVNETFAAALNEGEVPFVLVEARPLQHARNSQRAPF EECCCCCCCCCCHHEEEHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCHHCCCCCCCCE SLLFRNGSAFLFPQQTYQMRHARLGEIGIFLVPVARERDGFLYQAVFN EEEEECCCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA