| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is fpvA [H]
Identifier: 84621902
GI number: 84621902
Start: 269533
End: 269949
Strand: Direct
Name: fpvA [H]
Synonym: XOO_0245
Alternate gene names: 84621902
Gene position: 269533-269949 (Clockwise)
Preceding gene: 84621901
Following gene: 84621903
Centisome position: 5.46
GC content: 63.31
Gene sequence:
>417_bases ATGAGCGTGATCGGATTGCAGCGGCTGGAAGCGCAATCGCTTTTCAGCACCGACGACGTGATGCGTCACGTCACCGGCGT CAATGTGTCGTTCTACGACACCCAGCGGCCGTTGTATTTCGCGCGCGGCTTTCAGATCACCGACTTCCAGGTCGACGGCC TGCCGACCTACAGCGGCGCGATCAATCAGGAATACGACACGGTCTTCTACGACCGCATCGAAGTGATCCGCGGCGCCAAT TGCCTGCTCACCGGTGCGGGCATTCCCTCGGCCACGGTCAACCTGCTGCGCAAGCCTCCGGGCAAGGACTTCGACGCCTC GTCTGGAGTGAGCGCGGGCACCTGGGATTTCCGCCGCATGCAGGCCGACGTCACGCACCGCTCACCGAAGACGGGCGTTT TCGCAGCCGCGTGGTAG
Upstream 100 bases:
>100_bases AGACGCTCTGTCACGTCAGCGTCAACGGCACGTTGGGCCGCGCGCAACCGGCCACCACTACGCGGCTGCCGTTGACCTTG CAGGAAACGCCGCAATCGAT
Downstream 100 bases:
>100_bases CCGCCTGGCAGGATCGGGATTCCTACTACGACCGCTACCACGACACCAAAATGTCGGGCATGGCGGTGCTGGAAGGCGAC CTGACCGAGAGCAGCACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSVIGLQRLEAQSLFSTDDVMRHVTGVNVSFYDTQRPLYFARGFQITDFQVDGLPTYSGAINQEYDTVFYDRIEVIRGAN CLLTGAGIPSATVNLLRKPPGKDFDASSGVSAGTWDFRRMQADVTHRSPKTGVFAAAW
Sequences:
>Translated_138_residues MSVIGLQRLEAQSLFSTDDVMRHVTGVNVSFYDTQRPLYFARGFQITDFQVDGLPTYSGAINQEYDTVFYDRIEVIRGAN CLLTGAGIPSATVNLLRKPPGKDFDASSGVSAGTWDFRRMQADVTHRSPKTGVFAAAW >Mature_137_residues SVIGLQRLEAQSLFSTDDVMRHVTGVNVSFYDTQRPLYFARGFQITDFQVDGLPTYSGAINQEYDTVFYDRIEVIRGANC LLTGAGIPSATVNLLRKPPGKDFDASSGVSAGTWDFRRMQADVTHRSPKTGVFAAAW
Specific function: Receptor for the siderophore ferripyoverdine [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=136, Percent_Identity=36.7647058823529, Blast_Score=95, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 15245; Mature: 15114
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIGLQRLEAQSLFSTDDVMRHVTGVNVSFYDTQRPLYFARGFQITDFQVDGLPTYSGA CCCCCCHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCC INQEYDTVFYDRIEVIRGANCLLTGAGIPSATVNLLRKPPGKDFDASSGVSAGTWDFRRM CCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH QADVTHRSPKTGVFAAAW HHHHCCCCCCCCEEEECC >Mature Secondary Structure SVIGLQRLEAQSLFSTDDVMRHVTGVNVSFYDTQRPLYFARGFQITDFQVDGLPTYSGA CCCCCHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCC INQEYDTVFYDRIEVIRGANCLLTGAGIPSATVNLLRKPPGKDFDASSGVSAGTWDFRRM CCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH QADVTHRSPKTGVFAAAW HHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8335619; 8918232; 10984043 [H]