| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is ygjQ [C]
Identifier: 84621867
GI number: 84621867
Start: 230130
End: 230747
Strand: Direct
Name: ygjQ [C]
Synonym: XOO_0210
Alternate gene names: 84621867
Gene position: 230130-230747 (Clockwise)
Preceding gene: 84621866
Following gene: 84621868
Centisome position: 4.66
GC content: 66.83
Gene sequence:
>618_bases ATGGGCCGCGGCGTGAGCAGCCGTTCGCGCGGGCTCGGCCTGTTGGGCTGGGGTTGGCGGTTGTGCATGCCGGCACTGAT CTGGCTGGTGGCGGTGGCGGGCTGGATCGTGTGGATCGGTGACCGCGACCAGGCCGCGCCGGCCGATGTCATCATCGTGC TGGGTGCAGCTGCCTACGATGCGCGCCCTTCGCCGGTGTTCGAAGAACGCATCCGGCATGCGCTGGACCTGTATGCGCAG GGCTATGCGCCGCGGCTGTTGTTTACCGGCGGCTTCGGCAACGGCGCGCGCTTTGCCGAATCGCAGGTGGCCCGACGCTA TGCGCTGCGCCACGGCATTCCGCCGGAAGCCATCGTGATCGAAACCACATCGCGCACTACCCGGCAGAATCTGGAGCAGG CGCGCACGCTGATGGAACGGCACGGCATGCATCGGGCGATCATCGTCAGCGACCCGCTGCACATGGCGCGCGCGCTGCGG CTGAGCCAGGAACTGGGCATCGACGCGCTGGCCTCGTCCACGCCGAGCACGCGCTTTCGCAGCTTCCATACCAGCTGGCG CTTTCTGTTGCAGGAGTTGTATTACTTCCACCGCGATTTGCTGGTGCAAGGGCCGTGA
Upstream 100 bases:
>100_bases TGATCACCCTGGCCGCGGTGCTGGCCGAGCCGGCACGGTTTGCCGGGCGCCGGGTGGGCTTGATCCTGTCTGGTGGCAAT GTCGATCTGGATGCCTTGCC
Downstream 100 bases:
>100_bases CTGCAGGCCTATGATGCGGCTTTCCCAGCGGCAGGTTCGAGCATGAGCGAGACCCATCGGCAACACGCCATCGGCCTGGT CCAGGACTATTACGCAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MGRGVSSRSRGLGLLGWGWRLCMPALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYDARPSPVFEERIRHALDLYAQ GYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALR LSQELGIDALASSTPSTRFRSFHTSWRFLLQELYYFHRDLLVQGP
Sequences:
>Translated_205_residues MGRGVSSRSRGLGLLGWGWRLCMPALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYDARPSPVFEERIRHALDLYAQ GYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALR LSQELGIDALASSTPSTRFRSFHTSWRFLLQELYYFHRDLLVQGP >Mature_204_residues GRGVSSRSRGLGLLGWGWRLCMPALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYDARPSPVFEERIRHALDLYAQG YAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVIETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALRL SQELGIDALASSTPSTRFRSFHTSWRFLLQELYYFHRDLLVQGP
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23006; Mature: 22875
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRGVSSRSRGLGLLGWGWRLCMPALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYD CCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECHHCC ARPSPVFEERIRHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVI CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE ETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALRLSQELGIDALASSTPSTRFR ECCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHCCCCCHHHH SFHTSWRFLLQELYYFHRDLLVQGP HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRGVSSRSRGLGLLGWGWRLCMPALIWLVAVAGWIVWIGDRDQAAPADVIIVLGAAAYD CCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEECHHCC ARPSPVFEERIRHALDLYAQGYAPRLLFTGGFGNGARFAESQVARRYALRHGIPPEAIVI CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE ETTSRTTRQNLEQARTLMERHGMHRAIIVSDPLHMARALRLSQELGIDALASSTPSTRFR ECCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHCCCCCHHHH SFHTSWRFLLQELYYFHRDLLVQGP HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA