| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84621850
Identifier: 84621850
GI number: 84621850
Start: 203340
End: 203951
Strand: Direct
Name: 84621850
Synonym: XOO_0193
Alternate gene names: NA
Gene position: 203340-203951 (Clockwise)
Preceding gene: 84621849
Following gene: 84621852
Centisome position: 4.12
GC content: 62.25
Gene sequence:
>612_bases ATGGACGCATTGGCGCAATTTTTGACAGACGAGCAGGACCCGGTGGCCGTGGGCAAGATCCTGCCCAAGATCACCGAGTT GCTGACCCGCGACGAGCAGGTCGCGTACATCGCCGTGCAGAAGAAGATGGTGATGAACCTGTCGCCAGACGCGGTGGTGC TGACCAACCGTCGCTTCATCGTGGTCTCCCCGAAACTGCTCGGCATGACGTTCCGCGACTTCCCCTGGCGCGAGGTGCTC GATGTGCATATGAGCGAACAGATGCTCGGGGCGACCATCATGTGTCGCACCACGCAAGGCGCTTACGCCTCCATCGACAG CCTGCCCAAGAAACAGGCGCGGCGCGTGTATGCGTATGCGCAGCAGGTGGAAGAATCGGCCTACGAAAAGCGCCAGCAGT TGGAGATCGACAAGCTGCGTGCGGCGGCCGGCGGCGTGGTGGTGCATGCGCCCACTGCGCAGGGCGCGTTGCCTTCGGCC CAGCCGGTCGCGGTGGCCGCCTCCGATGATCCGGTGCAGGTGCTGAGCAAGCTCAAGCAGTTGTTGGATGCGGGTTTGGT CACGCAGGAAGAATTCGATGCCAAGAAAGCCGAGGTGTTGGCACGGTTGTAA
Upstream 100 bases:
>100_bases TGAAGCGGCAGCGCAAATGGTTATCGGCATTGCACAGCCGTCCATGCGGGGTGTTGTAGTGTCGCGCTCAACGCAATGAC TCAGCCGTGGGCGAGGGCAG
Downstream 100 bases:
>100_bases AGGCTGCTCATAGATGCAGCAGGCACCCGTCAGCTGGCGCAGGGGGCGCTAGAACTAAAGTGCAAGTCAGTACGCGCCGT GCCCAGTGTGCCGCATAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MDALAQFLTDEQDPVAVGKILPKITELLTRDEQVAYIAVQKKMVMNLSPDAVVLTNRRFIVVSPKLLGMTFRDFPWREVL DVHMSEQMLGATIMCRTTQGAYASIDSLPKKQARRVYAYAQQVEESAYEKRQQLEIDKLRAAAGGVVVHAPTAQGALPSA QPVAVAASDDPVQVLSKLKQLLDAGLVTQEEFDAKKAEVLARL
Sequences:
>Translated_203_residues MDALAQFLTDEQDPVAVGKILPKITELLTRDEQVAYIAVQKKMVMNLSPDAVVLTNRRFIVVSPKLLGMTFRDFPWREVL DVHMSEQMLGATIMCRTTQGAYASIDSLPKKQARRVYAYAQQVEESAYEKRQQLEIDKLRAAAGGVVVHAPTAQGALPSA QPVAVAASDDPVQVLSKLKQLLDAGLVTQEEFDAKKAEVLARL >Mature_203_residues MDALAQFLTDEQDPVAVGKILPKITELLTRDEQVAYIAVQKKMVMNLSPDAVVLTNRRFIVVSPKLLGMTFRDFPWREVL DVHMSEQMLGATIMCRTTQGAYASIDSLPKKQARRVYAYAQQVEESAYEKRQQLEIDKLRAAAGGVVVHAPTAQGALPSA QPVAVAASDDPVQVLSKLKQLLDAGLVTQEEFDAKKAEVLARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22364; Mature: 22364
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALAQFLTDEQDPVAVGKILPKITELLTRDEQVAYIAVQKKMVMNLSPDAVVLTNRRFI CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEHEEHHHHHHCCCCCEEEEECCEEE VVSPKLLGMTFRDFPWREVLDVHMSEQMLGATIMCRTTQGAYASIDSLPKKQARRVYAYA EECCHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHCCHHHHHHHHHHH QQVEESAYEKRQQLEIDKLRAAAGGVVVHAPTAQGALPSAQPVAVAASDDPVQVLSKLKQ HHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHH LLDAGLVTQEEFDAKKAEVLARL HHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDALAQFLTDEQDPVAVGKILPKITELLTRDEQVAYIAVQKKMVMNLSPDAVVLTNRRFI CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEHEEHHHHHHCCCCCEEEEECCEEE VVSPKLLGMTFRDFPWREVLDVHMSEQMLGATIMCRTTQGAYASIDSLPKKQARRVYAYA EECCHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHCCHHHHHHHHHHH QQVEESAYEKRQQLEIDKLRAAAGGVVVHAPTAQGALPSAQPVAVAASDDPVQVLSKLKQ HHHHHHHHHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHH LLDAGLVTQEEFDAKKAEVLARL HHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]