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The map label for this gene is yprB [H]

Identifier: 84621804

GI number: 84621804

Start: 149387

End: 150337

Strand: Direct

Name: yprB [H]

Synonym: XOO_0147

Alternate gene names: 84621804

Gene position: 149387-150337 (Clockwise)

Preceding gene: 84621803

Following gene: 84621807

Centisome position: 3.02

GC content: 66.04

Gene sequence:

>951_bases
GTGCGCCACAAGCCGGCGTTGTCGTCCGATGTCGATGTCGATGTCGATGCAATCATCGCTGCGGATGCCGATAGCGCAAG
CCATTCGCTGACAGCGCGCAGCACAACGGCACCATCGACAGCGACGCCGACGGCGCCACCGGTGCAGCGACGGACCGATA
TCGCCGGCCTGCGCAAGATGATCGGCCTGCGCGAGCGCGCGGTGTCGGCGCACACACCAATTCGCGCGCCATCCACCGAC
CGTTATCTCCCTGGCAACGAAATCGCACCCGGCCTGCATCTGATCGAAGCATTGCTGCCGCAAGCGATTCCGTGCGAAGC
ACTCTCGCTGGCCTTCGCCAAACGCGACGATGCCGTCGACCCGATGGACCTGCTGTTCTTCGACACCGAAACCACCGGCC
TGGCCGGGGGCACCGGCACCCGCGCCTTCATGATCGGCGTGGCCGATTGGTACGTCGATGCCGTGCAAGGCAGCGGCCTG
CGCGTGCGTCAGTTGATGATGTCGACAATGGCGGCCGAAAGCGCGATGCTCGATCTGTTCCGCACCTGGCTGACGCCGCG
CACGGTGCTGTCCAGCTACAACGGCCGCTGCTACGACGCACCGTTGCTGAAGACGCGCTACCGCCTGGCACGCCGTGGCG
ACCCGATTGCGGCCCTGGACCATGTGGATCTGCTGTTCCCTACCCGCCGCCGCTATCGCGGCACCTGGGAGAACTGCAAG
CTGTCCACCATCGAGCGGCAACTGCTGCGCGTGGTGCGCGAAGACGACCTGCCGGGCTCCGAAGCGCCGGCTGCCTGGTT
GAGTTACCTGCGCGGCGGCAGCGCGCGCAACCTGCGCCGCGTGGCCGAGCACAATCATCAAGACGTGGTCACCCTGTCGC
TGCTAATGCAACGCCTGGTCGCATTGGAAGCAGAGGAGCGCCATGCGCTGACGTTGGCGCGCACGCCTTGA

Upstream 100 bases:

>100_bases
ACAGGCCGTCGCATCCGCACTGACACGCCGCGCCTTGCAGTCGCCCATCCCTGCACCGCCTGCGCGCGACGCATCGGTGT
TCGCGTGGGTGGAACACGAT

Downstream 100 bases:

>100_bases
TGGGGTCATGCGACTGAGATGCGTGGCTGGTGCGGGGCAGGACGTCGGCTTGACTGACCCAATACAACACGCACGGCGCA
TGCTGCCTGCAACGGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRHKPALSSDVDVDVDAIIAADADSASHSLTARSTTAPSTATPTAPPVQRRTDIAGLRKMIGLRERAVSAHTPIRAPSTD
RYLPGNEIAPGLHLIEALLPQAIPCEALSLAFAKRDDAVDPMDLLFFDTETTGLAGGTGTRAFMIGVADWYVDAVQGSGL
RVRQLMMSTMAAESAMLDLFRTWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPIAALDHVDLLFPTRRRYRGTWENCK
LSTIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLVALEAEERHALTLARTP

Sequences:

>Translated_316_residues
MRHKPALSSDVDVDVDAIIAADADSASHSLTARSTTAPSTATPTAPPVQRRTDIAGLRKMIGLRERAVSAHTPIRAPSTD
RYLPGNEIAPGLHLIEALLPQAIPCEALSLAFAKRDDAVDPMDLLFFDTETTGLAGGTGTRAFMIGVADWYVDAVQGSGL
RVRQLMMSTMAAESAMLDLFRTWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPIAALDHVDLLFPTRRRYRGTWENCK
LSTIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLVALEAEERHALTLARTP
>Mature_316_residues
MRHKPALSSDVDVDVDAIIAADADSASHSLTARSTTAPSTATPTAPPVQRRTDIAGLRKMIGLRERAVSAHTPIRAPSTD
RYLPGNEIAPGLHLIEALLPQAIPCEALSLAFAKRDDAVDPMDLLFFDTETTGLAGGTGTRAFMIGVADWYVDAVQGSGL
RVRQLMMSTMAAESAMLDLFRTWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPIAALDHVDLLFPTRRRYRGTWENCK
LSTIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLVALEAEERHALTLARTP

Specific function: Unknown

COG id: COG3359

COG function: function code L; Predicted exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34803; Mature: 34803

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHKPALSSDVDVDVDAIIAADADSASHSLTARSTTAPSTATPTAPPVQRRTDIAGLRKM
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
IGLRERAVSAHTPIRAPSTDRYLPGNEIAPGLHLIEALLPQAIPCEALSLAFAKRDDAVD
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
PMDLLFFDTETTGLAGGTGTRAFMIGVADWYVDAVQGSGLRVRQLMMSTMAAESAMLDLF
CCCEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RTWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPIAALDHVDLLFPTRRRYRGTWENCK
HHHCCHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCCCC
LSTIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
ALEAEERHALTLARTP
HHCCCCCCEEEEECCC
>Mature Secondary Structure
MRHKPALSSDVDVDVDAIIAADADSASHSLTARSTTAPSTATPTAPPVQRRTDIAGLRKM
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
IGLRERAVSAHTPIRAPSTDRYLPGNEIAPGLHLIEALLPQAIPCEALSLAFAKRDDAVD
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
PMDLLFFDTETTGLAGGTGTRAFMIGVADWYVDAVQGSGLRVRQLMMSTMAAESAMLDLF
CCCEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RTWLTPRTVLSSYNGRCYDAPLLKTRYRLARRGDPIAALDHVDLLFPTRRRYRGTWENCK
HHHCCHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCCCCCCCC
LSTIERQLLRVVREDDLPGSEAPAAWLSYLRGGSARNLRRVAEHNHQDVVTLSLLMQRLV
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
ALEAEERHALTLARTP
HHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 3145906 [H]