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The map label for this gene is hrpC2 [H]

Identifier: 84621749

GI number: 84621749

Start: 97410

End: 99347

Strand: Direct

Name: hrpC2 [H]

Synonym: XOO_0092

Alternate gene names: 84621749

Gene position: 97410-99347 (Clockwise)

Preceding gene: 84621748

Following gene: 84621750

Centisome position: 1.97

GC content: 61.61

Gene sequence:

>1938_bases
ATGCTAGGAGATCGCGTGCGAGCGACAAGGTATTTCGCTTATAGCGGCGAAGTGGCGATCGCCGCCTTGGTGGTGGCGGT
CATCGGGCTGATGATCCTGCCCCTGCCAACGCCCATGATCGATACGCTACTGGGCATCAACATCACCCTGAGCGTGGTGC
TGTTGATGGTCACGATGTATGTGCCCGACTCGATCTCACTCTCGTCGTTTCCTTCCCTGCTGCTGTTCACCACCCTACTG
CGGTTGTCCTTGAATATCGCCTCGACGAAGTCGATCCTTCTGCATGCCGAGGCGGGCCATATCATCGAGAGCTTTGGCGA
GTTGGTGGTCGGCGGCAATCTGGTGGTGGGCCTGGTCGTTTTCTTGATCATCACCACCGTGCAGTTCATCGTGATCGCAA
AGGGCTCCGAGCGCGTTGCCGAGGTCGGTGCGCGCTTTACGTTGGACGCAATGCCCGGCAAGCAGATGAGTATCGATGCC
GACCTGCGTGGCGGCAACTTGACCGCAGATGAGGCACGCCGCAAACGCGCGCGGCTGGCCATTGAAAGCCAACTGCACGG
CGGCATGGATGGCGCCATGAAATTCGTCAAGGGTGATGCGATCGCCGGCCTGGTGATCACCATGGTCAACATCCTGGCCG
GCATCGTGGTCGGCGTGACGTACCACGGCATGACGGCGGGCGACGCCGCTAACCGCTTTGCGATTCTGTCGGTGGGCGAT
GCCATGGTGTCGCAGATCGCCTCACTGCTGATATCGGTGGCTGCCGGCGTCATGATCACCCGCGTGGCCAATGAAAACGA
GACCAGGCTCAGCTCGCTCGGGCTCGATATCGGCCGTCAGCTCACCAGCAACGCGCGAGCGCTGATGGCAGCGAGCGTGC
TGCTGGCCTGCTTTGCATTCGTCCCTGGCTTTCCGGCCGTGCTGTTCCTGCTGCTGGCAGCGGCCGTCGGCGCCGGCGGC
TATGCGATCTGGCGCAAGCAACGCGACATCAGCGGCAACGATCAGCGCAAGTTGCCTTCGACGAGCCGTAAAGGTGCCAA
AGGCGAGGCGCCACATATTCGCAAAACCGCTCCTGACTTCGCCTCACCGTTGTCGATGCGGCTGTCGCCGCAGCTGGCTG
CTCTGCTCGACCCCGCGCGGCTGGATCAGGCGATCGAAAGCGAGCGCCATCAATTGGTCGAGTTGCTGGGCTTGCCGTTT
CCCGGGATCGCGATATGGCAGAGCGAGTCGCTGCAAGGCATGCAATACGAGGTGTTGATTCACGATGTCCCCGAGACACG
CGCCGAACTGGAGAACACGGAGGACATGCAGGGAGCACTGGCCCGGCAGGCCATCGCGCCCCTGCATGCACGGGCGCACT
TGTTCGTCGGCATCCAGGAGACGCAGTGGATGCTGGAGCAGGTGGCTGCGGACTATCCCGGGCTGGTTGCGGAGGTCAAC
AAGGCGATGCCCGCCCAGCGCATTGCCGATGTGTTGCGGCGTCTACTGGAAGAAAGGATTCCGGTGCGCAATATCAAGAG
CATTCTGGAGAGTCTGGTGGTATGGGGGCCGAAGGAAAAGGATCTTCTGATGTTGACCGAATATGTGCGCTGCGACCTCA
GCCGTTATCTTGCGCATACCGCCACCGCAGGCACCGGGCAGCTGCCCGCAGTGATGCTCGACCACGCTGTCGAACAATTG
ATCAGGCAATCGATTCGCGCGACCGCGGCCGGCAATTTCCTGGCACTTCCGCCCGAGCAGGCGAACCAGCTTGTCGAACA
GGTGGAACGCATCGTTGGCGGTCAGGCGCAGCATCCGATGGCGGTGGTCGCGTCGATGGACGTGCGCAGATATGTACGCC
GCATGATCGAAGCACGGCTGACGTGGCTGCAGGTCTATTCGTTCCAGGAGCTGGGTTCGGAGGTACAGCTGCAGCCGATC
GGTAGAGTGGTGGTGTGA

Upstream 100 bases:

>100_bases
CAATCCCTGAGCAATTGTTCGAAACGGTTGCGGTGGTGTTGCGCTGGGTCGATGGACTCGGTCGCGACCACGGCGACGGC
GACGGCAATGGAGCCCTGCC

Downstream 100 bases:

>100_bases
TGCGCAAGCCGCCCCTCCGCCATGTGCGCATCCTGCCGGTCAGCGGCGCACTGCAGCGGCCGGCGACTCCAGCCACGCCA
GCTCGGTCGGCGCAGCGTTC

Product: HrcV protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLL
RLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDA
DLRGGNLTADEARRKRARLAIESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGD
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGG
YAIWRKQRDISGNDQRKLPSTSRKGAKGEAPHIRKTAPDFASPLSMRLSPQLAALLDPARLDQAIESERHQLVELLGLPF
PGIAIWQSESLQGMQYEVLIHDVPETRAELENTEDMQGALARQAIAPLHARAHLFVGIQETQWMLEQVAADYPGLVAEVN
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHTATAGTGQLPAVMLDHAVEQL
IRQSIRATAAGNFLALPPEQANQLVEQVERIVGGQAQHPMAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPI
GRVVV

Sequences:

>Translated_645_residues
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLL
RLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDA
DLRGGNLTADEARRKRARLAIESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGD
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGG
YAIWRKQRDISGNDQRKLPSTSRKGAKGEAPHIRKTAPDFASPLSMRLSPQLAALLDPARLDQAIESERHQLVELLGLPF
PGIAIWQSESLQGMQYEVLIHDVPETRAELENTEDMQGALARQAIAPLHARAHLFVGIQETQWMLEQVAADYPGLVAEVN
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHTATAGTGQLPAVMLDHAVEQL
IRQSIRATAAGNFLALPPEQANQLVEQVERIVGGQAQHPMAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPI
GRVVV
>Mature_645_residues
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLL
RLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDA
DLRGGNLTADEARRKRARLAIESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGD
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGG
YAIWRKQRDISGNDQRKLPSTSRKGAKGEAPHIRKTAPDFASPLSMRLSPQLAALLDPARLDQAIESERHQLVELLGLPF
PGIAIWQSESLQGMQYEVLIHDVPETRAELENTEDMQGALARQAIAPLHARAHLFVGIQETQWMLEQVAADYPGLVAEVN
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHTATAGTGQLPAVMLDHAVEQL
IRQSIRATAAGNFLALPPEQANQLVEQVERIVGGQAQHPMAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPI
GRVVV

Specific function: Involved in the secretion of a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=689, Percent_Identity=33.0914368650218, Blast_Score=316, Evalue=3e-87,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 69763; Mature: 69763

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMY
CCCCHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHH
VPDSISLSSFPSLLLFTTLLRLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVV
CCCCCCHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHH
FLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGGNLTADEARRKRARLA
HHHHHHHHHHEEECCCHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
IESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGD
HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCH
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGFPAVLFLLLAAAVGAGGYAIWRKQRDISGNDQRKLPSTSRKGAKGEAPHIRKTAPDF
HCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ASPLSMRLSPQLAALLDPARLDQAIESERHQLVELLGLPFPGIAIWQSESLQGMQYEVLI
HCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEE
HDVPETRAELENTEDMQGALARQAIAPLHARAHLFVGIQETQWMLEQVAADYPGLVAEVN
ECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCCHHHHHH
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHT
HCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ATAGTGQLPAVMLDHAVEQLIRQSIRATAAGNFLALPPEQANQLVEQVERIVGGQAQHPM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCH
AVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MLGDRVRATRYFAYSGEVAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMY
CCCCHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHH
VPDSISLSSFPSLLLFTTLLRLSLNIASTKSILLHAEAGHIIESFGELVVGGNLVVGLVV
CCCCCCHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHH
FLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGGNLTADEARRKRARLA
HHHHHHHHHHEEECCCHHHHHHCCCEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
IESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGD
HHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCH
AMVSQIASLLISVAAGVMITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPGFPAVLFLLLAAAVGAGGYAIWRKQRDISGNDQRKLPSTSRKGAKGEAPHIRKTAPDF
HCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ASPLSMRLSPQLAALLDPARLDQAIESERHQLVELLGLPFPGIAIWQSESLQGMQYEVLI
HCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEE
HDVPETRAELENTEDMQGALARQAIAPLHARAHLFVGIQETQWMLEQVAADYPGLVAEVN
ECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCCHHHHHH
KAMPAQRIADVLRRLLEERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLSRYLAHT
HCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
ATAGTGQLPAVMLDHAVEQLIRQSIRATAAGNFLALPPEQANQLVEQVERIVGGQAQHPM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCCCH
AVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]