| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is glnQ [C]
Identifier: 84621688
GI number: 84621688
Start: 33793
End: 34515
Strand: Direct
Name: glnQ [C]
Synonym: XOO_0031
Alternate gene names: 84621688
Gene position: 33793-34515 (Clockwise)
Preceding gene: 84621687
Following gene: 84621691
Centisome position: 0.68
GC content: 50.48
Gene sequence:
>723_bases TTGGATGGAGAAAGTGTGACATTACTTAATATGAATGCGGTGTGTGCAGGTTATGCTGCTCACCACGTTTTGTTGGACTT TACTGCGAGGATTGCTGCTGGTGAAGTGGTAGTTCTGATCGGCGCGAATGCTTCGGGAAAATCCACTTTAGTGCGGATTC TTTCTGGATTGCATAAGATAAGCGGTGGCACCGTGGTTTATAAGGATCTAGAGATTGGAAGCCGTCCACCCATCGGGCTC GCGGTGGCACCGAACATGCTGCCGGAGCGTTTGACTGGATTTCATGCGCTCGATCTTGTAGCGGCTGCATTACACACGAA TGCCATCAAGATGGCGATTGATTATGCGACTGTAGTGGATTTATACCCTTACATGCATGCTCCGATCGCGTCATACTCGT TTGGAACTCGGCAGAAACTAGCGATCTCATTGGCTATGGTTGGCACGCCGCGGTTGCTGCTTTTAGACGAATCACTTAAC GGATTGGACTTGCCCAGTGTCGGCCGTACGCTGAAGTTTTTGCATGAACTGACGCAGGTGAGTGGTCAAAGCGTGTTATT AGTAACGCACAACATCGACCTTGCTCAATCGTATGCGCAGCGAGTCTGGATGCTTGAGAACGGGCGTCTGGCAAGGGAGT GGAAGCAAGATGAGCTGAGTCGGATGCAGTGCGAAGGTCAGCTCATTTCACGTCAGGTATTGGAGCACTTTAGCGGTGCA TAG
Upstream 100 bases:
>100_bases TAAATACTATATTTCCGCTCGTAGCTCTAGTTGCTGGCCCGATCGCTGTGTTCATATTGCCGCTCCACTTGTTCTGGTTA ATTCTAAGAGGGAATCATGC
Downstream 100 bases:
>100_bases ACGGAGTCGAGGTTTGATCATTCGCAACGGGGTGCTGACATCGCCATTGCAGCGCCCAGGATTTTCTGTCATCGAAGCCA CCAGCATTGAAATTGCAAGA
Product: ATP-binding protein of ABC transporter
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MDGESVTLLNMNAVCAGYAAHHVLLDFTARIAAGEVVVLIGANASGKSTLVRILSGLHKISGGTVVYKDLEIGSRPPIGL AVAPNMLPERLTGFHALDLVAAALHTNAIKMAIDYATVVDLYPYMHAPIASYSFGTRQKLAISLAMVGTPRLLLLDESLN GLDLPSVGRTLKFLHELTQVSGQSVLLVTHNIDLAQSYAQRVWMLENGRLAREWKQDELSRMQCEGQLISRQVLEHFSGA
Sequences:
>Translated_240_residues MDGESVTLLNMNAVCAGYAAHHVLLDFTARIAAGEVVVLIGANASGKSTLVRILSGLHKISGGTVVYKDLEIGSRPPIGL AVAPNMLPERLTGFHALDLVAAALHTNAIKMAIDYATVVDLYPYMHAPIASYSFGTRQKLAISLAMVGTPRLLLLDESLN GLDLPSVGRTLKFLHELTQVSGQSVLLVTHNIDLAQSYAQRVWMLENGRLAREWKQDELSRMQCEGQLISRQVLEHFSGA >Mature_240_residues MDGESVTLLNMNAVCAGYAAHHVLLDFTARIAAGEVVVLIGANASGKSTLVRILSGLHKISGGTVVYKDLEIGSRPPIGL AVAPNMLPERLTGFHALDLVAAALHTNAIKMAIDYATVVDLYPYMHAPIASYSFGTRQKLAISLAMVGTPRLLLLDESLN GLDLPSVGRTLKFLHELTQVSGQSVLLVTHNIDLAQSYAQRVWMLENGRLAREWKQDELSRMQCEGQLISRQVLEHFSGA
Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI31657092, Length=219, Percent_Identity=29.6803652968037, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI153792144, Length=194, Percent_Identity=28.3505154639175, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI27477115, Length=186, Percent_Identity=30.1075268817204, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI150417984, Length=190, Percent_Identity=30, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI47078218, Length=192, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27436953, Length=186, Percent_Identity=29.5698924731183, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI45446740, Length=192, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27881501, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI30795238, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI6005701, Length=189, Percent_Identity=28.042328042328, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787029, Length=218, Percent_Identity=28.4403669724771, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789672, Length=226, Percent_Identity=27.8761061946903, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI87082268, Length=212, Percent_Identity=29.2452830188679, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI87081834, Length=228, Percent_Identity=28.5087719298246, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787164, Length=208, Percent_Identity=32.2115384615385, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI87081791, Length=223, Percent_Identity=25.1121076233184, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787712, Length=198, Percent_Identity=30.8080808080808, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787089, Length=234, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787370, Length=213, Percent_Identity=24.4131455399061, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1786345, Length=225, Percent_Identity=28.8888888888889, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1790467, Length=210, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1786398, Length=204, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788761, Length=230, Percent_Identity=24.3478260869565, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786563, Length=209, Percent_Identity=28.2296650717703, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789032, Length=212, Percent_Identity=27.3584905660377, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082267, Length=215, Percent_Identity=26.9767441860465, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1786253, Length=206, Percent_Identity=25.7281553398058, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788165, Length=207, Percent_Identity=25.1207729468599, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1786872, Length=222, Percent_Identity=25.2252252252252, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI48995001, Length=230, Percent_Identity=24.7826086956522, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17510237, Length=191, Percent_Identity=26.7015706806283, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI193208177, Length=228, Percent_Identity=25, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115533608, Length=217, Percent_Identity=27.1889400921659, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI28573571, Length=201, Percent_Identity=28.8557213930348, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI28573573, Length=201, Percent_Identity=28.8557213930348, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI116007184, Length=232, Percent_Identity=25.4310344827586, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI221500365, Length=232, Percent_Identity=25.4310344827586, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI221512771, Length=183, Percent_Identity=26.2295081967213, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24643674, Length=210, Percent_Identity=24.7619047619048, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24666092, Length=201, Percent_Identity=26.3681592039801, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR022216 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran; PF12558 DUF3744 [H]
EC number: NA
Molecular weight: Translated: 25985; Mature: 25985
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGESVTLLNMNAVCAGYAAHHVLLDFTARIAAGEVVVLIGANASGKSTLVRILSGLHKI CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHC SGGTVVYKDLEIGSRPPIGLAVAPNMLPERLTGFHALDLVAAALHTNAIKMAIDYATVVD CCCEEEEEECCCCCCCCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LYPYMHAPIASYSFGTRQKLAISLAMVGTPRLLLLDESLNGLDLPSVGRTLKFLHELTQV HHHHHCCCCCCCCCCCCHHEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHC SGQSVLLVTHNIDLAQSYAQRVWMLENGRLAREWKQDELSRMQCEGQLISRQVLEHFSGA CCCEEEEEEECCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDGESVTLLNMNAVCAGYAAHHVLLDFTARIAAGEVVVLIGANASGKSTLVRILSGLHKI CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHC SGGTVVYKDLEIGSRPPIGLAVAPNMLPERLTGFHALDLVAAALHTNAIKMAIDYATVVD CCCEEEEEECCCCCCCCCCEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LYPYMHAPIASYSFGTRQKLAISLAMVGTPRLLLLDESLNGLDLPSVGRTLKFLHELTQV HHHHHCCCCCCCCCCCCHHEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHC SGQSVLLVTHNIDLAQSYAQRVWMLENGRLAREWKQDELSRMQCEGQLISRQVLEHFSGA CCCEEEEEEECCHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11792842 [H]