| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621687
Identifier: 84621687
GI number: 84621687
Start: 32675
End: 33811
Strand: Direct
Name: 84621687
Synonym: XOO_0030
Alternate gene names: NA
Gene position: 32675-33811 (Clockwise)
Preceding gene: 84621686
Following gene: 84621688
Centisome position: 0.66
GC content: 49.43
Gene sequence:
>1137_bases ATGATTTTTTTATTGACACCACTGGAGCGTAGGCTGGCTACAGTGCTTCCTTGTACCGGGGCAAGAGTTGTTGTTTGGTA TTCGCGCTGGTGGCGCTTACGAAAATATCGAATTGAAGCGATCGCCAATGTGGCTATGCTGCTAGGAATCATACTGGCGC TTGTTTGGGTCTCGTGGTTGCCGATGCGTACAGTTCAGCCTCATGTTCTGCCTGCTGGCGGAAAGCTAGGGCTGTTGGGG GGAATGTTGCTCAGTGGTGGTGTGTCAGGATGGCTATCGTCGCGCAGGACTTCGTTCTACCTTCATGGGCATTGGCTGGC GTGGTGCATGCACCATCGACACTACTGTAACGAGCAAAAATTACGTTGTCTGTGTGGTGGATTACGTGGTGCTGTAAGCA TGGCTTGTATTAGCGTCGTCGCCTCCCATTGGTTTTTCATATCTAGATTAGGTGTAGCCACAGCGGCTGCCGTATTTTTT ACTGGATTCGTATTTGCCTTCTTTGGAAATAGAGGGCGTCTGAATTTTTTGATTTCTACGTCTGTTGCAAACAGCCGTGA ATTAAAGCGTATCATGCCTGCAGCTCCCATGCTACAGATGCCGCGCCCGAAAACGGTTGGATTTTTCTTTATCTTCGCAA TACTTTCCATCTCTATCACTTCGGTATGGGCTGTACGTATTGAGCATCCCGGTATGCTGGGTATGGCAGTGGCGATATCG GCTATCACATTCATCTTTTGTCAGAGCTTTCTGGTCGCTGGGGCGATGGAACTGCACAGGTTGCTGGCTTGGACAGGCGT GGCGCCGTGGCGTGCGGTATCACGTCTGATGTGGTTTCCTGTCGCAATTGCCGCAGGCATGACGGCTCCGATTGCAATTG CTGGGGTTGTCCTACATAAACTGATTTGGATAATGGTTGTTTTGGTGGAGCTAGTGGTAGTGTGTTATGTTGGAGTGATA TGGGTAGTGAGCGACCTTGTAGGAATTGGAGGCGGCCGTCGTTCAATTTTTCGTATGGTAAATACTATATTTCCGCTCGT AGCTCTAGTTGCTGGCCCGATCGCTGTGTTCATATTGCCGCTCCACTTGTTCTGGTTAATTCTAAGAGGGAATCATGCTT GGATGGAGAAAGTGTGA
Upstream 100 bases:
>100_bases CCTTTGTGTGCTGGTGTATTTGTTGTACTGCTGCTGGTTCCAAGTTAATCAGGTTGCGCTGGGCGGGCTCCATGAGCCCG CCTTTATTAGAGGAATTTTA
Downstream 100 bases:
>100_bases CATTACTTAATATGAATGCGGTGTGTGCAGGTTATGCTGCTCACCACGTTTTGTTGGACTTTACTGCGAGGATTGCTGCT GGTGAAGTGGTAGTTCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MIFLLTPLERRLATVLPCTGARVVVWYSRWWRLRKYRIEAIANVAMLLGIILALVWVSWLPMRTVQPHVLPAGGKLGLLG GMLLSGGVSGWLSSRRTSFYLHGHWLAWCMHHRHYCNEQKLRCLCGGLRGAVSMACISVVASHWFFISRLGVATAAAVFF TGFVFAFFGNRGRLNFLISTSVANSRELKRIMPAAPMLQMPRPKTVGFFFIFAILSISITSVWAVRIEHPGMLGMAVAIS AITFIFCQSFLVAGAMELHRLLAWTGVAPWRAVSRLMWFPVAIAAGMTAPIAIAGVVLHKLIWIMVVLVELVVVCYVGVI WVVSDLVGIGGGRRSIFRMVNTIFPLVALVAGPIAVFILPLHLFWLILRGNHAWMEKV
Sequences:
>Translated_378_residues MIFLLTPLERRLATVLPCTGARVVVWYSRWWRLRKYRIEAIANVAMLLGIILALVWVSWLPMRTVQPHVLPAGGKLGLLG GMLLSGGVSGWLSSRRTSFYLHGHWLAWCMHHRHYCNEQKLRCLCGGLRGAVSMACISVVASHWFFISRLGVATAAAVFF TGFVFAFFGNRGRLNFLISTSVANSRELKRIMPAAPMLQMPRPKTVGFFFIFAILSISITSVWAVRIEHPGMLGMAVAIS AITFIFCQSFLVAGAMELHRLLAWTGVAPWRAVSRLMWFPVAIAAGMTAPIAIAGVVLHKLIWIMVVLVELVVVCYVGVI WVVSDLVGIGGGRRSIFRMVNTIFPLVALVAGPIAVFILPLHLFWLILRGNHAWMEKV >Mature_378_residues MIFLLTPLERRLATVLPCTGARVVVWYSRWWRLRKYRIEAIANVAMLLGIILALVWVSWLPMRTVQPHVLPAGGKLGLLG GMLLSGGVSGWLSSRRTSFYLHGHWLAWCMHHRHYCNEQKLRCLCGGLRGAVSMACISVVASHWFFISRLGVATAAAVFF TGFVFAFFGNRGRLNFLISTSVANSRELKRIMPAAPMLQMPRPKTVGFFFIFAILSISITSVWAVRIEHPGMLGMAVAIS AITFIFCQSFLVAGAMELHRLLAWTGVAPWRAVSRLMWFPVAIAAGMTAPIAIAGVVLHKLIWIMVVLVELVVVCYVGVI WVVSDLVGIGGGRRSIFRMVNTIFPLVALVAGPIAVFILPLHLFWLILRGNHAWMEKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42005; Mature: 42005
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFLLTPLERRLATVLPCTGARVVVWYSRWWRLRKYRIEAIANVAMLLGIILALVWVSWL CEEEECHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PMRTVQPHVLPAGGKLGLLGGMLLSGGVSGWLSSRRTSFYLHGHWLAWCMHHRHYCNEQK CCCCCCCCEECCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCHHH LRCLCGGLRGAVSMACISVVASHWFFISRLGVATAAAVFFTGFVFAFFGNRGRLNFLIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE SVANSRELKRIMPAAPMLQMPRPKTVGFFFIFAILSISITSVWAVRIEHPGMLGMAVAIS CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHH AITFIFCQSFLVAGAMELHRLLAWTGVAPWRAVSRLMWFPVAIAAGMTAPIAIAGVVLHK HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LIWIMVVLVELVVVCYVGVIWVVSDLVGIGGGRRSIFRMVNTIFPLVALVAGPIAVFILP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHLFWLILRGNHAWMEKV HHHHHHHHCCCHHHHHCC >Mature Secondary Structure MIFLLTPLERRLATVLPCTGARVVVWYSRWWRLRKYRIEAIANVAMLLGIILALVWVSWL CEEEECHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PMRTVQPHVLPAGGKLGLLGGMLLSGGVSGWLSSRRTSFYLHGHWLAWCMHHRHYCNEQK CCCCCCCCEECCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCHHH LRCLCGGLRGAVSMACISVVASHWFFISRLGVATAAAVFFTGFVFAFFGNRGRLNFLIST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE SVANSRELKRIMPAAPMLQMPRPKTVGFFFIFAILSISITSVWAVRIEHPGMLGMAVAIS CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHH AITFIFCQSFLVAGAMELHRLLAWTGVAPWRAVSRLMWFPVAIAAGMTAPIAIAGVVLHK HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LIWIMVVLVELVVVCYVGVIWVVSDLVGIGGGRRSIFRMVNTIFPLVALVAGPIAVFILP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHLFWLILRGNHAWMEKV HHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA