| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84621664
Identifier: 84621664
GI number: 84621664
Start: 9837
End: 11030
Strand: Direct
Name: 84621664
Synonym: XOO_0007
Alternate gene names: NA
Gene position: 9837-11030 (Clockwise)
Preceding gene: 84621663
Following gene: 84621665
Centisome position: 0.2
GC content: 59.8
Gene sequence:
>1194_bases ATGAAACTGCTCAACCGCAAGCAAGCCCTGTTGTCCCTGTTCATTGCCGCGTCGCTGGGTGGGGCTGTCGTCACCGATGC GGTCGCGCAGTCGGACCGTTCTTCCGAACGCGCCAGCCGCAAATCCAAAAGCGGCAAGGCCGAGGAGCTGTACCCGCAGT CGACCCGTCAGGCACCGACGATCAAGCCGTCCTCGAAGTTGAGCAGCAAGCTGCAGAAGCTGATCGAAACCTTCAACAAG GGCGAGGACTATCCGGGCGTGCGCTCCCAGGCCGATGAGATCCTGGCCAATAGCGCTGCCAATGCAGCGGACAAGGCGCT GGCCGCGCAGCTCGCTGCACAGGCCGCCTACAACCTGGACGACACTGCCGCTGCCAAGAAGTATCTGCAGCAGGCCATCG GTCTGAACGCGCTGGACAACAACGGCCAGTTCCAGTCGATGCTGATGCTGGCCCAGTTGCAGCTGCAGGACAACCAGCAG GCCGAAGGTCTGGCCACGCTGGACAAGTATCTGGAAGAGAGCAAGTCGCAGCGTCCGGAAGATCTGATCCTCAAGGGCCA GGCGCTGTACCAGGCCGAACGCTACAAGGAAGCGATTCCGGTGCTGAAGCAGGCCATTGCCGCTTCGCCCCAGCCCAAGG ACACCTGGAACCAGCTGCTGATGGCGTCTTACGCCGAAGCCGGCCAGACCGGTGAGGCCGTCGCAGCCGCCGAGGCACTC GCCGCCAAGACGCCGAACGACAAGAAAGCCCAGCTCAACCTGGCCAGCATGTACATGCAGGCCGACCAGATGGACAAGGC CGCCGCCGTGATGGACAAGCTGCGTGCTGCCGGGCAGTTGACCGAAGAAAAGGAATACAAGCAGTTGTATTCCATCTACG CCAACACCGAAAACAAAGAAAAGGACGTCATCGCCGTCATCAATGAGGGTATGCAAAAAGGCATCCTCAAGCCCGATTAT CAGACATACCTCGCGCTGGCACAGTCTTATTACTACAGCGACAACGTGCCGAAGGCGATCGAAAACTGGCAGAAGGCCGC ACCGCTTTCCAAGGATGGCGAGACGTATTTGAATCTGGCCAAGGCGCTGCACTCGGAAGGTCGCATCCCGGAGGCCAAGC AGGCCGCACAGCAGGCGATCGCCAAGGGCGTTAAAAAACCCGAAGAAGCCAAGAAGATCATCAACCTGAAGTAA
Upstream 100 bases:
>100_bases GGGAACTGAGACTTTCTGCTAAGTTTCCCGGCTGAGATTTTTCGTACAGCGCCTATTCCGCTTTTCGTACCGCCCGACGG CGGATCGTCCAAGGTGAAAC
Downstream 100 bases:
>100_bases AAAAGAAAATAAACCCCCGAAATCCCTGTGTTTTTAGTGGTTACAGGACTCGGGATTGGTATAAGCTTGGGGGTTGATGC GGTGTCAAAGCCGTCCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPTIKPSSKLSSKLQKLIETFNK GEDYPGVRSQADEILANSAANAADKALAAQLAAQAAYNLDDTAAAKKYLQQAIGLNALDNNGQFQSMLMLAQLQLQDNQQ AEGLATLDKYLEESKSQRPEDLILKGQALYQAERYKEAIPVLKQAIAASPQPKDTWNQLLMASYAEAGQTGEAVAAAEAL AAKTPNDKKAQLNLASMYMQADQMDKAAAVMDKLRAAGQLTEEKEYKQLYSIYANTENKEKDVIAVINEGMQKGILKPDY QTYLALAQSYYYSDNVPKAIENWQKAAPLSKDGETYLNLAKALHSEGRIPEAKQAAQQAIAKGVKKPEEAKKIINLK
Sequences:
>Translated_397_residues MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPTIKPSSKLSSKLQKLIETFNK GEDYPGVRSQADEILANSAANAADKALAAQLAAQAAYNLDDTAAAKKYLQQAIGLNALDNNGQFQSMLMLAQLQLQDNQQ AEGLATLDKYLEESKSQRPEDLILKGQALYQAERYKEAIPVLKQAIAASPQPKDTWNQLLMASYAEAGQTGEAVAAAEAL AAKTPNDKKAQLNLASMYMQADQMDKAAAVMDKLRAAGQLTEEKEYKQLYSIYANTENKEKDVIAVINEGMQKGILKPDY QTYLALAQSYYYSDNVPKAIENWQKAAPLSKDGETYLNLAKALHSEGRIPEAKQAAQQAIAKGVKKPEEAKKIINLK >Mature_397_residues MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPTIKPSSKLSSKLQKLIETFNK GEDYPGVRSQADEILANSAANAADKALAAQLAAQAAYNLDDTAAAKKYLQQAIGLNALDNNGQFQSMLMLAQLQLQDNQQ AEGLATLDKYLEESKSQRPEDLILKGQALYQAERYKEAIPVLKQAIAASPQPKDTWNQLLMASYAEAGQTGEAVAAAEAL AAKTPNDKKAQLNLASMYMQADQMDKAAAVMDKLRAAGQLTEEKEYKQLYSIYANTENKEKDVIAVINEGMQKGILKPDY QTYLALAQSYYYSDNVPKAIENWQKAAPLSKDGETYLNLAKALHSEGRIPEAKQAAQQAIAKGVKKPEEAKKIINLK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43278; Mature: 43278
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPT CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCC IKPSSKLSSKLQKLIETFNKGEDYPGVRSQADEILANSAANAADKALAAQLAAQAAYNLD CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC DTAAAKKYLQQAIGLNALDNNGQFQSMLMLAQLQLQDNQQAEGLATLDKYLEESKSQRPE HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH DLILKGQALYQAERYKEAIPVLKQAIAASPQPKDTWNQLLMASYAEAGQTGEAVAAAEAL HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH AAKTPNDKKAQLNLASMYMQADQMDKAAAVMDKLRAAGQLTEEKEYKQLYSIYANTENKE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC KDVIAVINEGMQKGILKPDYQTYLALAQSYYYSDNVPKAIENWQKAAPLSKDGETYLNLA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHH KALHSEGRIPEAKQAAQQAIAKGVKKPEEAKKIINLK HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCC >Mature Secondary Structure MKLLNRKQALLSLFIAASLGGAVVTDAVAQSDRSSERASRKSKSGKAEELYPQSTRQAPT CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCCCCC IKPSSKLSSKLQKLIETFNKGEDYPGVRSQADEILANSAANAADKALAAQLAAQAAYNLD CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC DTAAAKKYLQQAIGLNALDNNGQFQSMLMLAQLQLQDNQQAEGLATLDKYLEESKSQRPE HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH DLILKGQALYQAERYKEAIPVLKQAIAASPQPKDTWNQLLMASYAEAGQTGEAVAAAEAL HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH AAKTPNDKKAQLNLASMYMQADQMDKAAAVMDKLRAAGQLTEEKEYKQLYSIYANTENKE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC KDVIAVINEGMQKGILKPDYQTYLALAQSYYYSDNVPKAIENWQKAAPLSKDGETYLNLA HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHH KALHSEGRIPEAKQAAQQAIAKGVKKPEEAKKIINLK HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA