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The map label for this gene is 84490254

Identifier: 84490254

GI number: 84490254

Start: 1649084

End: 1649791

Strand: Direct

Name: 84490254

Synonym: Msp_1473

Alternate gene names: NA

Gene position: 1649084-1649791 (Clockwise)

Preceding gene: 84490253

Following gene: 84490268

Centisome position: 93.31

GC content: 30.23

Gene sequence:

>708_bases
ATGAAAATATTATGGGCAATAACAGGAGCAGGACACCTACTAAAAGAAAGTATAAAAACACTAGAAAAACTATCAGAAAA
TAACCAAATAACAATCGTAACATCAAAAGCAGCAAAGGAAGTACTAAAACTATATGGCTACACAAAAAACATAGAAGAAA
TAATAGAAAAAAACAAAGAAAATCAACTAATAACAGACAAACAACAACAATACAGCTACCCTTTATCAGGAAAACTAACA
CATAATAAATATGATATAATAATAATCAGTCCCACAACAGCAAATACAACAGCAAAAATAGTACATGCAATAGCAGACAC
ACTAATAACAAACATAGCAGCACAATCAGGAAAAGGAGAAATACCTCTAATAGTAGTACCAGTAGACCAAAAACAAGGAC
ATATAACAACAACAATACCACCATACATAGACAAAGAAAAATGTAAAAAATGCACCCCCTGCCCTGCCCAACGAAGTTGT
CCAACAAATGCAATAATACCCCCAGAAATAAATACAATAAAATGCATAAGCTGTAAAAAATGTAAAGAAACATGTCCTTA
CCATGCAATAAATACAGATAAACAAATAAAGCTCTACATAAGACAAATAGATGCCCAAAATACAAAAAAATTAGAAACAA
TAGAGAATATAACAACACTCTACAAAGTAGAAGATATACCAAAAGAAATAAAAAGAATTTTAGGATAA

Upstream 100 bases:

>100_bases
ACACAATACACAAGTCGTGGTGTGGGCACAAATGCATTCTGGATACGAATAAATTGTACTCCAGAAATAACAAAAATAAC
ACTAAAAAGTAGATGATTAA

Downstream 100 bases:

>100_bases
TTAATCATCATCCCAAAATTTCAACATCTCATTTTTAAAGAATTTATGAAGATTTTCTGCACCAACAATTTTATTATTCA
ACTTCCAACAACTAGGATAT

Product: flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKILWAITGAGHLLKESIKTLEKLSENNQITIVTSKAAKEVLKLYGYTKNIEEIIEKNKENQLITDKQQQYSYPLSGKLT
HNKYDIIIISPTTANTTAKIVHAIADTLITNIAAQSGKGEIPLIVVPVDQKQGHITTTIPPYIDKEKCKKCTPCPAQRSC
PTNAIIPPEINTIKCISCKKCKETCPYHAINTDKQIKLYIRQIDAQNTKKLETIENITTLYKVEDIPKEIKRILG

Sequences:

>Translated_235_residues
MKILWAITGAGHLLKESIKTLEKLSENNQITIVTSKAAKEVLKLYGYTKNIEEIIEKNKENQLITDKQQQYSYPLSGKLT
HNKYDIIIISPTTANTTAKIVHAIADTLITNIAAQSGKGEIPLIVVPVDQKQGHITTTIPPYIDKEKCKKCTPCPAQRSC
PTNAIIPPEINTIKCISCKKCKETCPYHAINTDKQIKLYIRQIDAQNTKKLETIENITTLYKVEDIPKEIKRILG
>Mature_235_residues
MKILWAITGAGHLLKESIKTLEKLSENNQITIVTSKAAKEVLKLYGYTKNIEEIIEKNKENQLITDKQQQYSYPLSGKLT
HNKYDIIIISPTTANTTAKIVHAIADTLITNIAAQSGKGEIPLIVVPVDQKQGHITTTIPPYIDKEKCKKCTPCPAQRSC
PTNAIIPPEINTIKCISCKKCKETCPYHAINTDKQIKLYIRQIDAQNTKKLETIENITTLYKVEDIPKEIKRILG

Specific function: Unknown

COG id: COG1036

COG function: function code C; Archaeal flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014073
- InterPro:   IPR003382 [H]

Pfam domain/function: PF00037 Fer4; PF02441 Flavoprotein [H]

EC number: NA

Molecular weight: Translated: 26368; Mature: 26368

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILWAITGAGHLLKESIKTLEKLSENNQITIVTSKAAKEVLKLYGYTKNIEEIIEKNKE
CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCHHHHHHCCCC
NQLITDKQQQYSYPLSGKLTHNKYDIIIISPTTANTTAKIVHAIADTLITNIAAQSGKGE
CCCCCCCHHHCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
IPLIVVPVDQKQGHITTTIPPYIDKEKCKKCTPCPAQRSCPTNAIIPPEINTIKCISCKK
CCEEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHH
CKETCPYHAINTDKQIKLYIRQIDAQNTKKLETIENITTLYKVEDIPKEIKRILG
HHHCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKILWAITGAGHLLKESIKTLEKLSENNQITIVTSKAAKEVLKLYGYTKNIEEIIEKNKE
CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCHHHHHHCCCC
NQLITDKQQQYSYPLSGKLTHNKYDIIIISPTTANTTAKIVHAIADTLITNIAAQSGKGE
CCCCCCCHHHCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
IPLIVVPVDQKQGHITTTIPPYIDKEKCKKCTPCPAQRSCPTNAIIPPEINTIKCISCKK
CCEEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHH
CKETCPYHAINTDKQIKLYIRQIDAQNTKKLETIENITTLYKVEDIPKEIKRILG
HHHCCCCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]