| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84490216
Identifier: 84490216
GI number: 84490216
Start: 1607180
End: 1608214
Strand: Direct
Name: 84490216
Synonym: Msp_1434
Alternate gene names: NA
Gene position: 1607180-1608214 (Clockwise)
Preceding gene: 84490205
Following gene: 84490240
Centisome position: 90.93
GC content: 26.76
Gene sequence:
>1035_bases ATGAATGTTAGACCACGTTATTTTATTGAAACAAAAGACAGTTTATTTTTTGCTGTTAACACTTATTATCATCCAGAAGA TGCTGTTATTGCATTTTTAAGATACATTCCATGTGTTGATGGTGATAGAGAATTAAATGGTACTTTTTATAAGAAAGTTG ATAGTAATCAAGCATATGATTATATTAAAAAGAATCATCCTAATTACCTATTTGATTGGAATGTTGAAAATAAAAAGATG ATGGGTGTTCCACTAGAGGATATTAAAGAAATACACAGTCCTATTGATAGATTAAAAGAAATAATAAACGATGATTCACC TAATCCTTTTTATGAAAAGGTACGTTTACTTGCAAACATTTTTCATAATGAAGCAAACATTAGCTATGATAATATGGGTA TTACTGGTTCTACTCTTGCAAGATTAGAAAAAGTTGATAGCTCTGATATTGATTTTATTGTATTTGGATTAGATAATCAT AAAAAAGCTCGTCAATTATATGGTAGACTAAAAGATGATAAAAATAGCCCCCTGGATAGAATCAAGGGTAATTTTTGGAA CAAAGTATATAATAAAAGAATAAAGGATGGTTCATTATCATTTGATGAGTTTATTTGGTATGAATCTAGAAAAAACAACA GAGGTCTTATTAAAGGTACTTTATTTGATATTTTATCTACCATGAATTCTGAAGACTTATCTATTGAAGAAAATGTATAT TATAAACAAATTGCTTCTATGAAAATTAAATGTAAAATCATAGATGATAGTCAATCTTTTGATACTCCATCTATATATCA AGTATCTAATGTTGAAATTTTAGAAGGTCCTTCCATAAATATTGAAAAAATAGTATCATTTACACATACTTATGCTGGAG AAGTTATAAATAATGAAGAAGTTATTGCATCTGGTGTATGTGAAGAAGTAACCCATCTAGAAAATGGTAAAAAAACATAC AACTTAATTATAGGTACAACACGAGAATCTATAAATGAATATGTAAAACTAGAAAAAAGTCCATTATACTTATAA
Upstream 100 bases:
>100_bases ATTATCATAAAACTATGTTCAGTTTATCAAAACTATTATATATTAATATTATTTCATTCATAAGATTTAATTAGTAAAGT TTTTTAGGGAATAGTTTTAT
Downstream 100 bases:
>100_bases AAAAAGAATTAAAGTACTTCTTTAATTCTACTAATATCAAGATTAGATGTTTCTGAAATAGCCATAACAGCCATAACACC TGCTTGAACTGGATCTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MNVRPRYFIETKDSLFFAVNTYYHPEDAVIAFLRYIPCVDGDRELNGTFYKKVDSNQAYDYIKKNHPNYLFDWNVENKKM MGVPLEDIKEIHSPIDRLKEIINDDSPNPFYEKVRLLANIFHNEANISYDNMGITGSTLARLEKVDSSDIDFIVFGLDNH KKARQLYGRLKDDKNSPLDRIKGNFWNKVYNKRIKDGSLSFDEFIWYESRKNNRGLIKGTLFDILSTMNSEDLSIEENVY YKQIASMKIKCKIIDDSQSFDTPSIYQVSNVEILEGPSINIEKIVSFTHTYAGEVINNEEVIASGVCEEVTHLENGKKTY NLIIGTTRESINEYVKLEKSPLYL
Sequences:
>Translated_344_residues MNVRPRYFIETKDSLFFAVNTYYHPEDAVIAFLRYIPCVDGDRELNGTFYKKVDSNQAYDYIKKNHPNYLFDWNVENKKM MGVPLEDIKEIHSPIDRLKEIINDDSPNPFYEKVRLLANIFHNEANISYDNMGITGSTLARLEKVDSSDIDFIVFGLDNH KKARQLYGRLKDDKNSPLDRIKGNFWNKVYNKRIKDGSLSFDEFIWYESRKNNRGLIKGTLFDILSTMNSEDLSIEENVY YKQIASMKIKCKIIDDSQSFDTPSIYQVSNVEILEGPSINIEKIVSFTHTYAGEVINNEEVIASGVCEEVTHLENGKKTY NLIIGTTRESINEYVKLEKSPLYL >Mature_344_residues MNVRPRYFIETKDSLFFAVNTYYHPEDAVIAFLRYIPCVDGDRELNGTFYKKVDSNQAYDYIKKNHPNYLFDWNVENKKM MGVPLEDIKEIHSPIDRLKEIINDDSPNPFYEKVRLLANIFHNEANISYDNMGITGSTLARLEKVDSSDIDFIVFGLDNH KKARQLYGRLKDDKNSPLDRIKGNFWNKVYNKRIKDGSLSFDEFIWYESRKNNRGLIKGTLFDILSTMNSEDLSIEENVY YKQIASMKIKCKIIDDSQSFDTPSIYQVSNVEILEGPSINIEKIVSFTHTYAGEVINNEEVIASGVCEEVTHLENGKKTY NLIIGTTRESINEYVKLEKSPLYL
Specific function: Unknown
COG id: COG1665
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002934 [H]
Pfam domain/function: PF01909 NTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 39938; Mature: 39938
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVRPRYFIETKDSLFFAVNTYYHPEDAVIAFLRYIPCVDGDRELNGTFYKKVDSNQAYD CCCCCCEEEEECCCEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHH YIKKNHPNYLFDWNVENKKMMGVPLEDIKEIHSPIDRLKEIINDDSPNPFYEKVRLLANI HHHCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FHNEANISYDNMGITGSTLARLEKVDSSDIDFIVFGLDNHKKARQLYGRLKDDKNSPLDR HHCCCCCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHH IKGNFWNKVYNKRIKDGSLSFDEFIWYESRKNNRGLIKGTLFDILSTMNSEDLSIEENVY HCCHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHH YKQIASMKIKCKIIDDSQSFDTPSIYQVSNVEILEGPSINIEKIVSFTHTYAGEVINNEE HHHHHCEEEEEEEECCCCCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHCCCCH VIASGVCEEVTHLENGKKTYNLIIGTTRESINEYVKLEKSPLYL HHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHEECCCCCCC >Mature Secondary Structure MNVRPRYFIETKDSLFFAVNTYYHPEDAVIAFLRYIPCVDGDRELNGTFYKKVDSNQAYD CCCCCCEEEEECCCEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHH YIKKNHPNYLFDWNVENKKMMGVPLEDIKEIHSPIDRLKEIINDDSPNPFYEKVRLLANI HHHCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FHNEANISYDNMGITGSTLARLEKVDSSDIDFIVFGLDNHKKARQLYGRLKDDKNSPLDR HHCCCCCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHH IKGNFWNKVYNKRIKDGSLSFDEFIWYESRKNNRGLIKGTLFDILSTMNSEDLSIEENVY HCCHHHHHHHHHHCCCCCCCHHHHEEEECCCCCCCEEHHHHHHHHHHCCCCCCCCHHHHH YKQIASMKIKCKIIDDSQSFDTPSIYQVSNVEILEGPSINIEKIVSFTHTYAGEVINNEE HHHHHCEEEEEEEECCCCCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHCCCCH VIASGVCEEVTHLENGKKTYNLIIGTTRESINEYVKLEKSPLYL HHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]