| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84490196
Identifier: 84490196
GI number: 84490196
Start: 1589170
End: 1589385
Strand: Direct
Name: 84490196
Synonym: Msp_1414
Alternate gene names: NA
Gene position: 1589170-1589385 (Clockwise)
Preceding gene: 84490195
Following gene: 84490197
Centisome position: 89.92
GC content: 25.0
Gene sequence:
>216_bases ATGACTTTAACTTCCAAATTATTTCAGGAAATATCCTCTGATTTAAAGAAAGATTTTCCAGAGATTGAGTCAATAGAACG TGAAAATAATAGTGTTATTATAACAGGATGTGATGATGTGTTATGGAACATCTTTGAAGTATTATTTAATGGTGTTAAAA ACATTGAATTTAATATGGATAAAAACAAAACACATTATCTTATAATAGATTTTTAG
Upstream 100 bases:
>100_bases GATATAACTGGTGGTGTTAAACAGGTTATTGTTGCTGCAGGTCAAGCTGCACAAGCTGTAACACATATTAGTGAATTATT ATTGATATAGTGTTGATGAT
Downstream 100 bases:
>100_bases ATTTATTCAATTTAGGAGTTAATTAAGATGAATAATAGAATTGAAAATAATTATGTTTCAGAAAAACAGTTACGTCAGCT TAATCAAAGTAGAGTAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MTLTSKLFQEISSDLKKDFPEIESIERENNSVIITGCDDVLWNIFEVLFNGVKNIEFNMDKNKTHYLIIDF
Sequences:
>Translated_71_residues MTLTSKLFQEISSDLKKDFPEIESIERENNSVIITGCDDVLWNIFEVLFNGVKNIEFNMDKNKTHYLIIDF >Mature_70_residues TLTSKLFQEISSDLKKDFPEIESIERENNSVIITGCDDVLWNIFEVLFNGVKNIEFNMDKNKTHYLIIDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8345; Mature: 8213
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTSKLFQEISSDLKKDFPEIESIERENNSVIITGCDDVLWNIFEVLFNGVKNIEFNMD CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCEECCC KNKTHYLIIDF CCCEEEEEEEC >Mature Secondary Structure TLTSKLFQEISSDLKKDFPEIESIERENNSVIITGCDDVLWNIFEVLFNGVKNIEFNMD CHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCEECCC KNKTHYLIIDF CCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA