Click here to switch to the map view.

The map label for this gene is rpl37ae

Identifier: 84490041

GI number: 84490041

Start: 1420618

End: 1420887

Strand: Direct

Name: rpl37ae

Synonym: Msp_1253

Alternate gene names: 84490041

Gene position: 1420618-1420887 (Clockwise)

Preceding gene: 84490040

Following gene: 297616208

Centisome position: 80.38

GC content: 36.67

Gene sequence:

>270_bases
ATGGTAAAAAAAAGTAAAGTAGGATCTACTGGTCGTTTTGGTGCTAGATATGGTAGAAAAGCTAAAAGAACCGTAAAAGA
CATAGAAGACAAAATGCATGCAAAACATGTTTGTCCTAAATGTGATAGACCTGGTGTAAAAAGAACCCATGCAGGTATCT
GGAAATGTAGAAAATGTGGCGCAGTATTTACTGGTGGAGCATACATTCCTACAACACCAATGGGAAAAGTTGCAAAACGT
AACATTAAACGTATAACTGGAGGAGAATAA

Upstream 100 bases:

>100_bases
AATTAATTCTCAAAAAAAGTTATTATCTATCAACAAAATCAGAGTATTTGTAGAAAGATAACATGATATTTTTAATATTA
ACTGAATGGAAGGTGAAAAA

Downstream 100 bases:

>100_bases
GCATGTACAAATGCATTCACTGTGGAAAAGAAGTTGATATTAAAACATATGCAGAATCTAAATGTCCATATTGCAGATAC
AGAATCTTATTTAAAGAAGT

Product: 50S ribosomal protein L37Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MVKKSKVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCGAVFTGGAYIPTTPMGKVAKR
NIKRITGGE

Sequences:

>Translated_89_residues
MVKKSKVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCGAVFTGGAYIPTTPMGKVAKR
NIKRITGGE
>Mature_89_residues
MVKKSKVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCGAVFTGGAYIPTTPMGKVAKR
NIKRITGGE

Specific function: Unknown

COG id: COG1997

COG function: function code J; Ribosomal protein L37AE/L43A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L37Ae family

Homologues:

Organism=Homo sapiens, GI4506643, Length=80, Percent_Identity=38.75, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17535699, Length=80, Percent_Identity=36.25, Blast_Score=65, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6325300, Length=86, Percent_Identity=40.6976744186046, Blast_Score=69, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322554, Length=86, Percent_Identity=40.6976744186046, Blast_Score=69, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581863, Length=80, Percent_Identity=33.75, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17864394, Length=80, Percent_Identity=33.75, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL37A_METST (Q2NEX3)

Other databases:

- EMBL:   CP000102
- RefSeq:   YP_448273.1
- ProteinModelPortal:   Q2NEX3
- SMR:   Q2NEX3
- STRING:   Q2NEX3
- GeneID:   3855819
- GenomeReviews:   CP000102_GR
- KEGG:   mst:Msp_1253
- NMPDR:   fig|339860.6.peg.1200
- eggNOG:   arNOG12917
- HOGENOM:   HBG610728
- OMA:   MEITQHA
- PhylomeDB:   Q2NEX3
- ProtClustDB:   PRK03976
- BioCyc:   MSTA339860:MSP_1253-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00327
- InterPro:   IPR002674
- InterPro:   IPR011331
- InterPro:   IPR022945
- InterPro:   IPR011332
- Gene3D:   G3DSA:2.20.25.30
- PANTHER:   PTHR11517
- TIGRFAMs:   TIGR00280

Pfam domain/function: PF01780 Ribosomal_L37ae; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 9801; Mature: 9801

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKSKVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCG
CCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
AVFTGGAYIPTTPMGKVAKRNIKRITGGE
CCCCCCEECCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVKKSKVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCG
CCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
AVFTGGAYIPTTPMGKVAKRNIKRITGGE
CCCCCCEECCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA