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The map label for this gene is rpl15e

Identifier: 84490031

GI number: 84490031

Start: 1412271

End: 1412831

Strand: Direct

Name: rpl15e

Synonym: Msp_1243

Alternate gene names: 84490031

Gene position: 1412271-1412831 (Clockwise)

Preceding gene: 84490029

Following gene: 84490032

Centisome position: 79.91

GC content: 33.87

Gene sequence:

>561_bases
ATGAGGTGTTATATAATGTATAAGTATATGAAAGAAGCATGGAAAAACCCAGATGAATCTTATGTGAAAGAACTCATGAG
AGAAAGATTACCTAAATGGAGAAGACAACCTGTAATTATAAGAATTGACAAACCAACAAGAATCGACAGAGCACGTCGTT
TAGGTTATAAAGCTAAAACAGGATATGTAGTCGCTAGAATTAGAGTAAGAAGAGGATCAAGAAGAAAATCCAGATTCAAA
AACGGAAGAGATCCTAAAAGAATGGGTGTAAACAAAATTTCAGGAGAAAAATCCATTCAAAGAATGGCTGAAGAACGTGT
TGCACGTAAATATCCTAACTTAGAAGTATTAAACTCATACTGGGTATGGGAAGATGGTAAAGCAAAATACTACGAAGTAA
TCCTTGTAGATCCTCAATGTCCTTCAATCCAACATGATAACAAAATCAATTGGATTTGTAGTAAAAAACACACAAGACGT
GCTTTCAGAGGTTTAACTTCTGCAGGTAAAAAAGGAAGAGGATTAAATAAAAAAGGTAAAGGTGCTGAAAAGGTTAGATA
A

Upstream 100 bases:

>100_bases
TTCTTTGAATATATGTTTTTACTATTATTCTATTTTTATACTCCTTTAATATACAACATATTAAAAAACTAAAATTGGAT
GTGGCTTTTATAGCTGAACA

Downstream 100 bases:

>100_bases
ATGATCCATAATATTTCTTATAGAACATTTGTTTATGGAACAGAGGATGAAGAAAAGGTAACTGATGCTATCAGTTATAT
TTTTCCCAACCTTTTACCTG

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRCYIMYKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFK
NGRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRR
AFRGLTSAGKKGRGLNKKGKGAEKVR

Sequences:

>Translated_186_residues
MRCYIMYKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFK
NGRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRR
AFRGLTSAGKKGRGLNKKGKGAEKVR
>Mature_186_residues
MRCYIMYKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFK
NGRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRR
AFRGLTSAGKKGRGLNKKGKGAEKVR

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family

Homologues:

Organism=Homo sapiens, GI15431293, Length=176, Percent_Identity=46.0227272727273, Blast_Score=147, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17541432, Length=173, Percent_Identity=45.6647398843931, Blast_Score=123, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6323057, Length=176, Percent_Identity=48.2954545454545, Blast_Score=158, Evalue=4e-40,
Organism=Saccharomyces cerevisiae, GI6323769, Length=176, Percent_Identity=48.2954545454545, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15E_METST (Q2NEY3)

Other databases:

- EMBL:   CP000102
- RefSeq:   YP_448263.1
- ProteinModelPortal:   Q2NEY3
- SMR:   Q2NEY3
- STRING:   Q2NEY3
- GeneID:   3855487
- GenomeReviews:   CP000102_GR
- KEGG:   mst:Msp_1243
- NMPDR:   fig|339860.6.peg.1191
- eggNOG:   arNOG05300
- HOGENOM:   HBG577798
- OMA:   KWYEVIL
- PhylomeDB:   Q2NEY3
- ProtClustDB:   PRK04243
- BioCyc:   MSTA339860:MSP_1243-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00256
- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678
- Gene3D:   G3DSA:3.40.1120.10
- PANTHER:   PTHR11847

Pfam domain/function: PF00827 Ribosomal_L15e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 22189; Mature: 22189

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCYIMYKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKT
CEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCC
GYVVARIRVRRGSRRKSRFKNGRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSY
CEEEEEEEECCCCHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCE
WVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRRAFRGLTSAGKKGRGLNKKGK
EEEECCCCEEEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC
GAEKVR
CCCCCC
>Mature Secondary Structure
MRCYIMYKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKT
CEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCC
GYVVARIRVRRGSRRKSRFKNGRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSY
CEEEEEEEECCCCHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCE
WVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRRAFRGLTSAGKKGRGLNKKGK
EEEECCCCEEEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCC
GAEKVR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA