Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is cshA [H]

Identifier: 84490017

GI number: 84490017

Start: 1398810

End: 1400561

Strand: Direct

Name: cshA [H]

Synonym: Msp_1228

Alternate gene names: 84490017

Gene position: 1398810-1400561 (Clockwise)

Preceding gene: 84490016

Following gene: 84490019

Centisome position: 79.14

GC content: 29.17

Gene sequence:

>1752_bases
ATGGAAAAATTAAAATTTAAAGACTTAAATATATCTCCCGAAATACAAAAAGCAGTTGCAGATATGGGTTTTGAAGAAGC
ATCACCTATTCAATCATTAGCAATACCTCAAATATTAGCCCATAAAGATGTTACTGGTCAAGCTCAAACTGGAACTGGTA
AAACTGCTGCATTTGGAATACCATTACTTGAAAATATAGATAGTGAAGATAATAATTTACAAGCAATTATTTTATGTCCT
ACACGTGAATTAGCAATACAAGTAGCAGAAGAATTAAGAAAATTATCTGTTTACCTTCCTAAAATAGATGTACTTCCAGT
TTATGGTGGTCAACCAATAGATAGACAAATTAAAGCATTACAAAAAGGTGTTCAAATAATAATAGGTACACCAGGACGTG
TAATGGATCATATTGATAGGGGAACTTTAAGTTTAAATAACATTAAAACAGTAATCTTAGATGAAGCTGATGAAATGTTA
GATATGGGTTTTAGAGAAGATATTGAATATATTTTAGAAGATATCCCATATGAAAGACAATTCCTATTATTCTCTGCAAC
ATTACCTCAAGAAATACTTCAATTAGCACAGAGATACCAGACAAATCCAGAGATTGTTAAGGTTACAAAACATGAATTAA
CAACACCTGATGTTGAACAGAAATATTTTGAAGTTAAAGAAGATATGAAACTTGAACTATTATCTAGATTATTAGATTTA
CATGATTTTGATTTATCATTAGTATTTTGTAATACAAAAAGAAAAGTTGATAAACTTGTAAGTCACCTTCAAATAAGAGG
ATACCTTGCAGATGGATTACATGGCGATCTTACACAAAATCAAAGAGATCGAGTAATGAGTAAATTTAAAAAGGGAAATA
TCGAAATATTGGTTGCAACAGATGTTGCTGCTAGAGGTATTGATGTTGGTGGTGTTGAAGCAGTATTTAACTTTGATATA
CCAAATGATAATGAATATTATGTTCATAGAATAGGACGTACTGGAAGAGCTGGAAAAACTGGAAAAGCATACAGTTTCGT
ATCTGGACGTGAAATATATCAACTAAGAGATATTCAAAGATATGCTAAAACTAAAATAGAACAAGCACCTATTCCTGCCC
TTAGTGATGTTGAAGAAGTTAAAAAAGATAACTTCATTGAAGAATTAAAAGAAAAAATTAATACTGAAGATATTTCCAAA
GAAACATACATAATTGAAAAATTAGTTGAAGAAGACTATAACTCAATAGATATTGCTGCTACTTTACTTAAAGGAGTAAT
TGATGATAAACGTTATAAAGAAGAAGAATTTGGAGATACTGAAGCTCATGAAGGATTTGTACGTTTCTTTATGAGTGTTG
GTAGAAAACAAAACATTACAATTAGTGTAATATTAAATTCCATCTATGAAAAAACTGGACTTACAGGTCATCAAATAGGT
AACATTGACATATTTGATAATTTTTCATTTGTAGAAATTCCAAAGGCTAATGCTTCAGATTTCTATAGATTTATGGGTGA
TACCTATATAGAAAATAAACGTGCACATATAGAACCTGCACGACCTAGAGATAAATCTAAGAAAAACAATACCCGAAATA
ACAATAGGAATTTTAATAAAAAACGAGGACGTAAAAGTAAAAAATTTAATCCACATAGAAATGATTATCATCAAAAAGAT
AGTTATAGAAAGGATACTTATCGAAAAGAAAGTAAATTTAGAAAAGATAATTATGGAAATGAATCATATTAA

Upstream 100 bases:

>100_bases
ATAAGTAATAGAAGAATACGCCAGTATTATTACACAGAATATCCTATAAAATGAAAGAAATATAAAAGATAATTATACTC
TGAAACAGGAGAACCAAAAA

Downstream 100 bases:

>100_bases
TTCATTCCCCAACTCTTTTTATTAAAGTAATTATATATTTTTCAAATGGTTAGCTATTGTTTTAGCCACACTTATTTTTG
CAACTTCACTTTTTAATGTA

Product: helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCP
TRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEML
DMGFREDIEYILEDIPYERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKLELLSRLLDL
HDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEILVATDVAARGIDVGGVEAVFNFDI
PNDNEYYVHRIGRTGRAGKTGKAYSFVSGREIYQLRDIQRYAKTKIEQAPIPALSDVEEVKKDNFIEELKEKINTEDISK
ETYIIEKLVEEDYNSIDIAATLLKGVIDDKRYKEEEFGDTEAHEGFVRFFMSVGRKQNITISVILNSIYEKTGLTGHQIG
NIDIFDNFSFVEIPKANASDFYRFMGDTYIENKRAHIEPARPRDKSKKNNTRNNNRNFNKKRGRKSKKFNPHRNDYHQKD
SYRKDTYRKESKFRKDNYGNESY

Sequences:

>Translated_583_residues
MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCP
TRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEML
DMGFREDIEYILEDIPYERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKLELLSRLLDL
HDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEILVATDVAARGIDVGGVEAVFNFDI
PNDNEYYVHRIGRTGRAGKTGKAYSFVSGREIYQLRDIQRYAKTKIEQAPIPALSDVEEVKKDNFIEELKEKINTEDISK
ETYIIEKLVEEDYNSIDIAATLLKGVIDDKRYKEEEFGDTEAHEGFVRFFMSVGRKQNITISVILNSIYEKTGLTGHQIG
NIDIFDNFSFVEIPKANASDFYRFMGDTYIENKRAHIEPARPRDKSKKNNTRNNNRNFNKKRGRKSKKFNPHRNDYHQKD
SYRKDTYRKESKFRKDNYGNESY
>Mature_583_residues
MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCP
TRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEML
DMGFREDIEYILEDIPYERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKLELLSRLLDL
HDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEILVATDVAARGIDVGGVEAVFNFDI
PNDNEYYVHRIGRTGRAGKTGKAYSFVSGREIYQLRDIQRYAKTKIEQAPIPALSDVEEVKKDNFIEELKEKINTEDISK
ETYIIEKLVEEDYNSIDIAATLLKGVIDDKRYKEEEFGDTEAHEGFVRFFMSVGRKQNITISVILNSIYEKTGLTGHQIG
NIDIFDNFSFVEIPKANASDFYRFMGDTYIENKRAHIEPARPRDKSKKNNTRNNNRNFNKKRGRKSKKFNPHRNDYHQKD
SYRKDTYRKESKFRKDNYGNESY

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=367, Percent_Identity=40.0544959128065, Blast_Score=291, Evalue=1e-78,
Organism=Homo sapiens, GI224593278, Length=436, Percent_Identity=35.7798165137615, Blast_Score=253, Evalue=4e-67,
Organism=Homo sapiens, GI301171475, Length=377, Percent_Identity=39.5225464190981, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI301171467, Length=376, Percent_Identity=39.6276595744681, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI87196351, Length=376, Percent_Identity=39.6276595744681, Blast_Score=250, Evalue=3e-66,
Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=35.230352303523, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI4503529, Length=368, Percent_Identity=38.8586956521739, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=38.5869565217391, Blast_Score=245, Evalue=7e-65,
Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=38.563829787234, Blast_Score=245, Evalue=8e-65,
Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=38.563829787234, Blast_Score=245, Evalue=8e-65,
Organism=Homo sapiens, GI4758138, Length=368, Percent_Identity=38.0434782608696, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=39.3139841688654, Blast_Score=242, Evalue=7e-64,
Organism=Homo sapiens, GI50659095, Length=423, Percent_Identity=34.7517730496454, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI222352149, Length=337, Percent_Identity=41.839762611276, Blast_Score=238, Evalue=8e-63,
Organism=Homo sapiens, GI13129006, Length=405, Percent_Identity=35.3086419753086, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI148613856, Length=367, Percent_Identity=36.7847411444142, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI38201710, Length=367, Percent_Identity=36.7847411444142, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=38.375350140056, Blast_Score=236, Evalue=5e-62,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=38.375350140056, Blast_Score=236, Evalue=6e-62,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=38.375350140056, Blast_Score=235, Evalue=7e-62,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=38.375350140056, Blast_Score=235, Evalue=8e-62,
Organism=Homo sapiens, GI41327773, Length=366, Percent_Identity=38.2513661202186, Blast_Score=235, Evalue=8e-62,
Organism=Homo sapiens, GI21040371, Length=387, Percent_Identity=32.8165374677003, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI4758112, Length=389, Percent_Identity=33.1619537275064, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI18375623, Length=389, Percent_Identity=33.1619537275064, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI20149629, Length=366, Percent_Identity=34.9726775956284, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI31542656, Length=371, Percent_Identity=34.2318059299191, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI45446747, Length=347, Percent_Identity=35.7348703170029, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI45446743, Length=347, Percent_Identity=35.7348703170029, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI188035877, Length=344, Percent_Identity=36.6279069767442, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI55749865, Length=357, Percent_Identity=36.9747899159664, Blast_Score=220, Evalue=4e-57,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=34.8314606741573, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=34.1085271317829, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI164419732, Length=371, Percent_Identity=35.3099730458221, Blast_Score=213, Evalue=5e-55,
Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=33.8501291989664, Blast_Score=212, Evalue=8e-55,
Organism=Homo sapiens, GI51094101, Length=410, Percent_Identity=31.7073170731707, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI164419743, Length=410, Percent_Identity=31.7073170731707, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI256223453, Length=412, Percent_Identity=31.7961165048544, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=34.2318059299191, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=35.7541899441341, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI41327776, Length=366, Percent_Identity=32.5136612021858, Blast_Score=192, Evalue=8e-49,
Organism=Homo sapiens, GI62241024, Length=364, Percent_Identity=32.967032967033, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI13514831, Length=348, Percent_Identity=34.4827586206897, Blast_Score=185, Evalue=8e-47,
Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=29.9748110831234, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI38327634, Length=342, Percent_Identity=32.7485380116959, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI38569505, Length=380, Percent_Identity=30.7894736842105, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI38569503, Length=382, Percent_Identity=30.8900523560209, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI17505907, Length=407, Percent_Identity=28.7469287469287, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=30.952380952381, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI256773275, Length=392, Percent_Identity=30.1020408163265, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI154759257, Length=459, Percent_Identity=27.6688453159041, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI9966805, Length=322, Percent_Identity=29.1925465838509, Blast_Score=129, Evalue=7e-30,
Organism=Homo sapiens, GI20336298, Length=204, Percent_Identity=32.843137254902, Blast_Score=110, Evalue=2e-24,
Organism=Escherichia coli, GI87082221, Length=557, Percent_Identity=36.2657091561939, Blast_Score=369, Evalue=1e-103,
Organism=Escherichia coli, GI1787605, Length=379, Percent_Identity=43.2717678100264, Blast_Score=324, Evalue=9e-90,
Organism=Escherichia coli, GI1787016, Length=376, Percent_Identity=41.4893617021277, Blast_Score=288, Evalue=5e-79,
Organism=Escherichia coli, GI1790214, Length=366, Percent_Identity=39.0710382513661, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1788930, Length=381, Percent_Identity=35.6955380577428, Blast_Score=211, Evalue=8e-56,
Organism=Escherichia coli, GI48994977, Length=405, Percent_Identity=22.962962962963, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=40.5994550408719, Blast_Score=305, Evalue=6e-83,
Organism=Caenorhabditis elegans, GI71995724, Length=367, Percent_Identity=40.5994550408719, Blast_Score=292, Evalue=4e-79,
Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=40.3269754768392, Blast_Score=291, Evalue=9e-79,
Organism=Caenorhabditis elegans, GI17552114, Length=373, Percent_Identity=34.5844504021448, Blast_Score=248, Evalue=8e-66,
Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=39.2572944297082, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=39.8351648351648, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17510309, Length=375, Percent_Identity=37.6, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17510307, Length=375, Percent_Identity=37.6, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI71995514, Length=375, Percent_Identity=37.6, Blast_Score=235, Evalue=6e-62,
Organism=Caenorhabditis elegans, GI71982858, Length=346, Percent_Identity=36.1271676300578, Blast_Score=234, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17555296, Length=449, Percent_Identity=34.2984409799555, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17510559, Length=452, Percent_Identity=31.858407079646, Blast_Score=233, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI115533224, Length=359, Percent_Identity=37.0473537604457, Blast_Score=232, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI86570094, Length=336, Percent_Identity=40.1785714285714, Blast_Score=225, Evalue=5e-59,
Organism=Caenorhabditis elegans, GI17537549, Length=342, Percent_Identity=39.4736842105263, Blast_Score=225, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=36.3881401617251, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=36.6576819407008, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71999646, Length=400, Percent_Identity=32.5, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71999644, Length=381, Percent_Identity=32.8083989501312, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.6756756756757, Blast_Score=207, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=34.7708894878706, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=31.7460317460317, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=31.7460317460317, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=362, Percent_Identity=33.9779005524862, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=32.7823691460055, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=32.2674418604651, Blast_Score=195, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17536099, Length=368, Percent_Identity=34.2391304347826, Blast_Score=195, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI17536101, Length=368, Percent_Identity=34.2391304347826, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=34.0845070422535, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17536103, Length=368, Percent_Identity=34.2391304347826, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI193208216, Length=381, Percent_Identity=33.0708661417323, Blast_Score=176, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17505370, Length=372, Percent_Identity=32.5268817204301, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=30.7692307692308, Blast_Score=157, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17508543, Length=376, Percent_Identity=28.1914893617021, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI25148203, Length=410, Percent_Identity=26.5853658536585, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17556951, Length=376, Percent_Identity=28.9893617021277, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=37.1859296482412, Blast_Score=151, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI25148291, Length=386, Percent_Identity=28.7564766839378, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17507641, Length=394, Percent_Identity=28.9340101522843, Blast_Score=142, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI32564046, Length=384, Percent_Identity=28.125, Blast_Score=133, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI71997889, Length=352, Percent_Identity=26.7045454545455, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148205, Length=335, Percent_Identity=25.3731343283582, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=44.6601941747573, Blast_Score=106, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=39.247311827957, Blast_Score=283, Evalue=7e-77,
Organism=Saccharomyces cerevisiae, GI6322912, Length=367, Percent_Identity=40.0544959128065, Blast_Score=254, Evalue=3e-68,
Organism=Saccharomyces cerevisiae, GI6322323, Length=367, Percent_Identity=40.0544959128065, Blast_Score=254, Evalue=3e-68,
Organism=Saccharomyces cerevisiae, GI6324778, Length=342, Percent_Identity=39.4736842105263, Blast_Score=253, Evalue=5e-68,
Organism=Saccharomyces cerevisiae, GI6325138, Length=342, Percent_Identity=41.2280701754386, Blast_Score=252, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6324217, Length=335, Percent_Identity=40.8955223880597, Blast_Score=249, Evalue=8e-67,
Organism=Saccharomyces cerevisiae, GI6321856, Length=345, Percent_Identity=40.8695652173913, Blast_Score=243, Evalue=5e-65,
Organism=Saccharomyces cerevisiae, GI6320041, Length=371, Percent_Identity=36.6576819407008, Blast_Score=243, Evalue=8e-65,
Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=38.268156424581, Blast_Score=234, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6324620, Length=388, Percent_Identity=35.5670103092784, Blast_Score=225, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6320119, Length=371, Percent_Identity=33.9622641509434, Blast_Score=225, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6323021, Length=372, Percent_Identity=34.9462365591398, Blast_Score=220, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6321963, Length=411, Percent_Identity=32.1167883211679, Blast_Score=199, Evalue=8e-52,
Organism=Saccharomyces cerevisiae, GI6320449, Length=387, Percent_Identity=32.2997416020672, Blast_Score=199, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6322427, Length=361, Percent_Identity=34.9030470914127, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=34.5205479452055, Blast_Score=192, Evalue=9e-50,
Organism=Saccharomyces cerevisiae, GI6321111, Length=378, Percent_Identity=33.0687830687831, Blast_Score=191, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=28.8770053475936, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6321267, Length=349, Percent_Identity=35.8166189111748, Blast_Score=170, Evalue=7e-43,
Organism=Saccharomyces cerevisiae, GI6323306, Length=409, Percent_Identity=30.5623471882641, Blast_Score=165, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6319618, Length=426, Percent_Identity=29.81220657277, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=384, Percent_Identity=30.9895833333333, Blast_Score=160, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6320173, Length=227, Percent_Identity=32.5991189427313, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6322876, Length=505, Percent_Identity=25.3465346534653, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=27.247191011236, Blast_Score=117, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6321374, Length=447, Percent_Identity=24.1610738255034, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24645031, Length=367, Percent_Identity=40.3269754768392, Blast_Score=288, Evalue=7e-78,
Organism=Drosophila melanogaster, GI24582080, Length=366, Percent_Identity=39.8907103825137, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24582078, Length=366, Percent_Identity=39.8907103825137, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI17136248, Length=366, Percent_Identity=39.8907103825137, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24582075, Length=366, Percent_Identity=39.8907103825137, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24583281, Length=372, Percent_Identity=35.2150537634409, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24583279, Length=372, Percent_Identity=35.2150537634409, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24642151, Length=364, Percent_Identity=38.1868131868132, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24584399, Length=333, Percent_Identity=40.2402402402402, Blast_Score=242, Evalue=4e-64,
Organism=Drosophila melanogaster, GI17985987, Length=368, Percent_Identity=38.5869565217391, Blast_Score=241, Evalue=1e-63,
Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=38.6363636363636, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI21356161, Length=375, Percent_Identity=37.3333333333333, Blast_Score=238, Evalue=1e-62,
Organism=Drosophila melanogaster, GI28574962, Length=345, Percent_Identity=37.9710144927536, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24585582, Length=356, Percent_Identity=37.6404494382022, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI281361218, Length=390, Percent_Identity=35.6410256410256, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24644481, Length=390, Percent_Identity=35.6410256410256, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24644479, Length=390, Percent_Identity=35.6410256410256, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24644487, Length=390, Percent_Identity=35.6410256410256, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI45551833, Length=390, Percent_Identity=35.6410256410256, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24644485, Length=390, Percent_Identity=35.6410256410256, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24644483, Length=390, Percent_Identity=35.6410256410256, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI24581954, Length=347, Percent_Identity=36.0230547550432, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI24581952, Length=347, Percent_Identity=36.0230547550432, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI24581956, Length=347, Percent_Identity=36.0230547550432, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI24584994, Length=373, Percent_Identity=38.8739946380697, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=34.5505617977528, Blast_Score=223, Evalue=4e-58,
Organism=Drosophila melanogaster, GI18857967, Length=370, Percent_Identity=34.8648648648649, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=35.3932584269663, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI28575014, Length=404, Percent_Identity=31.4356435643564, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI17136814, Length=374, Percent_Identity=33.6898395721925, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=34.8242811501597, Blast_Score=191, Evalue=2e-48,
Organism=Drosophila melanogaster, GI21355559, Length=374, Percent_Identity=33.4224598930481, Blast_Score=179, Evalue=7e-45,
Organism=Drosophila melanogaster, GI28571808, Length=360, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI28571809, Length=360, Percent_Identity=33.3333333333333, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24643725, Length=383, Percent_Identity=30.0261096605744, Blast_Score=169, Evalue=6e-42,
Organism=Drosophila melanogaster, GI17647335, Length=402, Percent_Identity=26.1194029850746, Blast_Score=168, Evalue=9e-42,
Organism=Drosophila melanogaster, GI24666101, Length=409, Percent_Identity=29.3398533007335, Blast_Score=165, Evalue=7e-41,
Organism=Drosophila melanogaster, GI24642822, Length=373, Percent_Identity=31.6353887399464, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI20130173, Length=628, Percent_Identity=25.4777070063694, Blast_Score=158, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24668515, Length=378, Percent_Identity=30.4232804232804, Blast_Score=154, Evalue=2e-37,
Organism=Drosophila melanogaster, GI19920478, Length=390, Percent_Identity=28.2051282051282, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI18859659, Length=220, Percent_Identity=33.6363636363636, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI28571338, Length=220, Percent_Identity=33.6363636363636, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI17136666, Length=415, Percent_Identity=26.2650602409639, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24640164, Length=357, Percent_Identity=22.4089635854342, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI116008407, Length=126, Percent_Identity=35.7142857142857, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 66964; Mature: 66964

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGI
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC
PLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKAL
HHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
QKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQ
HCCCEEEECCCHHHHHHHCCCCEECCCEEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCE
FLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKLELLSRLLDL
EEEEECCCHHHHHHHHHHHCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
HDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEILVAT
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE
DVAARGIDVGGVEAVFNFDIPNDNEYYVHRIGRTGRAGKTGKAYSFVSGREIYQLRDIQR
CHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHH
YAKTKIEQAPIPALSDVEEVKKDNFIEELKEKINTEDISKETYIIEKLVEEDYNSIDIAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCHHHHHH
TLLKGVIDDKRYKEEEFGDTEAHEGFVRFFMSVGRKQNITISVILNSIYEKTGLTGHQIG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCC
NIDIFDNFSFVEIPKANASDFYRFMGDTYIENKRAHIEPARPRDKSKKNNTRNNNRNFNK
CEEEECCCCEEEECCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
KRGRKSKKFNPHRNDYHQKDSYRKDTYRKESKFRKDNYGNESY
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGI
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECC
PLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKAL
HHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
QKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFREDIEYILEDIPYERQ
HCCCEEEECCCHHHHHHHCCCCEECCCEEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCE
FLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKLELLSRLLDL
EEEEECCCHHHHHHHHHHHCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
HDFDLSLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEILVAT
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE
DVAARGIDVGGVEAVFNFDIPNDNEYYVHRIGRTGRAGKTGKAYSFVSGREIYQLRDIQR
CHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEECCCCHHHHHHHHHH
YAKTKIEQAPIPALSDVEEVKKDNFIEELKEKINTEDISKETYIIEKLVEEDYNSIDIAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCHHHHHH
TLLKGVIDDKRYKEEEFGDTEAHEGFVRFFMSVGRKQNITISVILNSIYEKTGLTGHQIG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCC
NIDIFDNFSFVEIPKANASDFYRFMGDTYIENKRAHIEPARPRDKSKKNNTRNNNRNFNK
CEEEECCCCEEEECCCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
KRGRKSKKFNPHRNDYHQKDSYRKDTYRKESKFRKDNYGNESY
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA