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The map label for this gene is 84489952

Identifier: 84489952

GI number: 84489952

Start: 1329704

End: 1330945

Strand: Direct

Name: 84489952

Synonym: Msp_1160

Alternate gene names: NA

Gene position: 1329704-1330945 (Clockwise)

Preceding gene: 84489951

Following gene: 84489954

Centisome position: 75.23

GC content: 25.36

Gene sequence:

>1242_bases
ATGTTTGATATTTTAATTACTTTGATATTTGGAATAATCATTGGTACAATCACTGGAATAATGCCAGGATTACATGTAAA
TACTGTTGGAATTATAATATTTTCAACATCCCCCACATTACTTTCTATTACAAATCCACTAGTTATTTCCACATTTCTTG
TATCTATTGCACTAACACATGCAATGATAGAATTCATACCCTCATTGCTTATGGGAATTCCAAGTGAAGATACTGTTTTA
TCAGTACAACCAGGACATAGAATGTTATTTAAAGGAGAATCTATGGGTGCAATACGACTTGTTAGCTTTGGAGGATATTG
TTCCATTGTTTTATTGATTATTATAATGCCAATTCTTTTTATAGTATTACCTTTAATATATTATGGATTAAAAGAATACA
TTGGTATTTTATTAATTATTATAATGATTTTAATATTATATTTTAGTAATAAGAGTAATAATAAGCGTTTAATGAGCACT
CTTATATTTTTAGTCTCGGGAATTATGGGGTTAGTTCTATTAAATGGTAATTTAGGTAGTAATATAGCTCTTCTTTCCAT
GTTATCAGGATTATTTAGTGTAAGTAATCTAATATACTCCATCAATAATAATTCCAAAATTCCACATCAAAAAGATATAA
AGAATATTGTAATTGACTCTAAATTTAAAAAATCAGTTTTTGCTGGCAGTATTTCAGGTTGTATTATGGGATTATTACCA
GGCCTTGGTCCAGCCCAAGGTACTTTAATTGCACAGATTATTACATTAAATAAAGACATAAAAGTTGATAATTTTCTAGT
CACAAATAGTGGAATTAATGTTTGTGACACATTATTTTCATTGATTGCTATTTATTTAATTAGTAATCCACGTAGTGCTA
TAAGTGTTTATGTTAATAATTTAATTGAAGATATCACATTGATTCATATATTATTTTTTATATGTGTTAGTTTAGTATGT
GTTTCAGTTACATGTGTTGTTTCAATTAAGTTAGGTGATTTATTAATTAAAAATATAAAAAAAGTTGATTATAATAAATT
AAATATTTTTATTGTTGTTTTAATAAGTATGATTGTATTTTTTTATACAATATTAAGTCAGGGATGTATATGGTATGTAA
TACTTTGTTACATTACAAGTATTAGCCTTGGAATTTTAGTAAATACACTTGATTTAAGTAAAAGTAATTTAATGGGTGTT
TTAATTATCCCCTCTATTTTAACATATATTGGTATTATATGA

Upstream 100 bases:

>100_bases
TACAATCACTTTTTTATATTCTTTTTTTATATTTTAGTCTTTTTTAATATTTTAGATAAAAGATAAGTATTACTTATTTT
ATAAATAGTATTAATAGATT

Downstream 100 bases:

>100_bases
TATAAATCTCTTTACATATTTTTTTAAGAAAGGTTTCATATCCACTAGTATCCACACCTGGAAAAGCATCAATTAGTCCC
ACATCATATCTTTGATTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MFDILITLIFGIIIGTITGIMPGLHVNTVGIIIFSTSPTLLSITNPLVISTFLVSIALTHAMIEFIPSLLMGIPSEDTVL
SVQPGHRMLFKGESMGAIRLVSFGGYCSIVLLIIIMPILFIVLPLIYYGLKEYIGILLIIIMILILYFSNKSNNKRLMST
LIFLVSGIMGLVLLNGNLGSNIALLSMLSGLFSVSNLIYSINNNSKIPHQKDIKNIVIDSKFKKSVFAGSISGCIMGLLP
GLGPAQGTLIAQIITLNKDIKVDNFLVTNSGINVCDTLFSLIAIYLISNPRSAISVYVNNLIEDITLIHILFFICVSLVC
VSVTCVVSIKLGDLLIKNIKKVDYNKLNIFIVVLISMIVFFYTILSQGCIWYVILCYITSISLGILVNTLDLSKSNLMGV
LIIPSILTYIGII

Sequences:

>Translated_413_residues
MFDILITLIFGIIIGTITGIMPGLHVNTVGIIIFSTSPTLLSITNPLVISTFLVSIALTHAMIEFIPSLLMGIPSEDTVL
SVQPGHRMLFKGESMGAIRLVSFGGYCSIVLLIIIMPILFIVLPLIYYGLKEYIGILLIIIMILILYFSNKSNNKRLMST
LIFLVSGIMGLVLLNGNLGSNIALLSMLSGLFSVSNLIYSINNNSKIPHQKDIKNIVIDSKFKKSVFAGSISGCIMGLLP
GLGPAQGTLIAQIITLNKDIKVDNFLVTNSGINVCDTLFSLIAIYLISNPRSAISVYVNNLIEDITLIHILFFICVSLVC
VSVTCVVSIKLGDLLIKNIKKVDYNKLNIFIVVLISMIVFFYTILSQGCIWYVILCYITSISLGILVNTLDLSKSNLMGV
LIIPSILTYIGII
>Mature_413_residues
MFDILITLIFGIIIGTITGIMPGLHVNTVGIIIFSTSPTLLSITNPLVISTFLVSIALTHAMIEFIPSLLMGIPSEDTVL
SVQPGHRMLFKGESMGAIRLVSFGGYCSIVLLIIIMPILFIVLPLIYYGLKEYIGILLIIIMILILYFSNKSNNKRLMST
LIFLVSGIMGLVLLNGNLGSNIALLSMLSGLFSVSNLIYSINNNSKIPHQKDIKNIVIDSKFKKSVFAGSISGCIMGLLP
GLGPAQGTLIAQIITLNKDIKVDNFLVTNSGINVCDTLFSLIAIYLISNPRSAISVYVNNLIEDITLIHILFFICVSLVC
VSVTCVVSIKLGDLLIKNIKKVDYNKLNIFIVVLISMIVFFYTILSQGCIWYVILCYITSISLGILVNTLDLSKSNLMGV
LIIPSILTYIGII

Specific function: Unknown

COG id: COG1784

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 45050; Mature: 45050

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDILITLIFGIIIGTITGIMPGLHVNTVGIIIFSTSPTLLSITNPLVISTFLVSIALTH
CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHH
AMIEFIPSLLMGIPSEDTVLSVQPGHRMLFKGESMGAIRLVSFGGYCSIVLLIIIMPILF
HHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHH
IVLPLIYYGLKEYIGILLIIIMILILYFSNKSNNKRLMSTLIFLVSGIMGLVLLNGNLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCC
NIALLSMLSGLFSVSNLIYSINNNSKIPHQKDIKNIVIDSKFKKSVFAGSISGCIMGLLP
HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GLGPAQGTLIAQIITLNKDIKVDNFLVTNSGINVCDTLFSLIAIYLISNPRSAISVYVNN
CCCCCCHHHHHHHHHCCCCCEECEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LIEDITLIHILFFICVSLVCVSVTCVVSIKLGDLLIKNIKKVDYNKLNIFIVVLISMIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FYTILSQGCIWYVILCYITSISLGILVNTLDLSKSNLMGVLIIPSILTYIGII
HHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDILITLIFGIIIGTITGIMPGLHVNTVGIIIFSTSPTLLSITNPLVISTFLVSIALTH
CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHH
AMIEFIPSLLMGIPSEDTVLSVQPGHRMLFKGESMGAIRLVSFGGYCSIVLLIIIMPILF
HHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHH
IVLPLIYYGLKEYIGILLIIIMILILYFSNKSNNKRLMSTLIFLVSGIMGLVLLNGNLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCC
NIALLSMLSGLFSVSNLIYSINNNSKIPHQKDIKNIVIDSKFKKSVFAGSISGCIMGLLP
HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
GLGPAQGTLIAQIITLNKDIKVDNFLVTNSGINVCDTLFSLIAIYLISNPRSAISVYVNN
CCCCCCHHHHHHHHHCCCCCEECEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LIEDITLIHILFFICVSLVCVSVTCVVSIKLGDLLIKNIKKVDYNKLNIFIVVLISMIVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FYTILSQGCIWYVILCYITSISLGILVNTLDLSKSNLMGVLIIPSILTYIGII
HHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]