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The map label for this gene is ef1B

Identifier: 84489951

GI number: 84489951

Start: 1329321

End: 1329587

Strand: Direct

Name: ef1B

Synonym: Msp_1159

Alternate gene names: 84489951

Gene position: 1329321-1329587 (Clockwise)

Preceding gene: 84489950

Following gene: 84489952

Centisome position: 75.21

GC content: 31.84

Gene sequence:

>267_bases
ATGTCTGATGTAGCAGCAATATTAAAAGTAATGCCTGAAAGTCCTGAAATTGACTTAGAAGCATTGAAAGAAACTATTAA
AAATACAATAGATGCTGATTCTTTTGAAAGAATTGAAGAAGAACCTATTGGATTTGGATTAATTGCATTAAATGTTACTA
TTGTAGTTGATGATGGTGAAGGTGGAACTGAACCAGCAGAAGAAGCATTAGCAGCACTTGATGAAATTCAATCTGTTGAA
GTAACTGATGTTAGAAGATTAATGTAA

Upstream 100 bases:

>100_bases
TCCTAAATGCAGAACTTTTGGACATGAATACACATGTGAATGTGGATTTAAAGGACCTTAAATAATTCAAAATTAAATAA
AATCTTAAGGAGAAATATTA

Downstream 100 bases:

>100_bases
GTGTATTTTTTATACTTACAATCACTTTTTTATATTCTTTTTTTATATTTTAGTCTTTTTTAATATTTTAGATAAAAGAT
AAGTATTACTTATTTTATAA

Product: elongation factor 1-beta

Products: NA

Alternate protein names: EF-1-beta; aEF-1beta

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSDVAAILKVMPESPEIDLEALKETIKNTIDADSFERIEEEPIGFGLIALNVTIVVDDGEGGTEPAEEALAALDEIQSVE
VTDVRRLM

Sequences:

>Translated_88_residues
MSDVAAILKVMPESPEIDLEALKETIKNTIDADSFERIEEEPIGFGLIALNVTIVVDDGEGGTEPAEEALAALDEIQSVE
VTDVRRLM
>Mature_87_residues
SDVAAILKVMPESPEIDLEALKETIKNTIDADSFERIEEEPIGFGLIALNVTIVVDDGEGGTEPAEEALAALDEIQSVEV
TDVRRLM

Specific function: Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA

COG id: COG2092

COG function: function code J; Translation elongation factor EF-1beta

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-1-beta/EF-1-delta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EF1B_METST (Q2NF63)

Other databases:

- EMBL:   CP000102
- RefSeq:   YP_448183.1
- ProteinModelPortal:   Q2NF63
- SMR:   Q2NF63
- STRING:   Q2NF63
- GeneID:   3856055
- GenomeReviews:   CP000102_GR
- KEGG:   mst:Msp_1159
- NMPDR:   fig|339860.6.peg.1110
- eggNOG:   arNOG12647
- HOGENOM:   HBG541037
- OMA:   DEPLAFG
- ProtClustDB:   PRK00435
- BioCyc:   MSTA339860:MSP_1159-MONOMER
- HAMAP:   MF_00043
- InterPro:   IPR014717
- InterPro:   IPR004542
- InterPro:   IPR014038
- Gene3D:   G3DSA:3.30.70.60
- PIRSF:   PIRSF006521
- SMART:   SM00888
- TIGRFAMs:   TIGR00489

Pfam domain/function: PF00736 EF1_GNE; SSF54984 Transl_elong_EF1B_B/D_G_exch

EC number: NA

Molecular weight: Translated: 9528; Mature: 9397

Theoretical pI: Translated: 3.64; Mature: 3.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVAAILKVMPESPEIDLEALKETIKNTIDADSFERIEEEPIGFGLIALNVTIVVDDGE
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEEEEEECCC
GGTEPAEEALAALDEIQSVEVTDVRRLM
CCCCHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure 
SDVAAILKVMPESPEIDLEALKETIKNTIDADSFERIEEEPIGFGLIALNVTIVVDDGE
CHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEEEEEEEECCC
GGTEPAEEALAALDEIQSVEVTDVRRLM
CCCCHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA