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The map label for this gene is yfhQ [C]

Identifier: 84489842

GI number: 84489842

Start: 1193143

End: 1193859

Strand: Direct

Name: yfhQ [C]

Synonym: Msp_1047

Alternate gene names: 84489842

Gene position: 1193143-1193859 (Clockwise)

Preceding gene: 84489839

Following gene: 84489843

Centisome position: 67.51

GC content: 28.03

Gene sequence:

>717_bases
TTGAAAATTTATACAGTGTTTGTTGAACCGAAAACATCAGGAAATATAGGATTTCTTGCAAGAACTATGAAAAATTTTGG
ATTAAAAAAATTAGTATTAATTAATCCATGTAAACTTGAAAATGATGCATATTATCAAGCAATGCATGCTAGAGAACTTG
TACAAGATGCAATGATATATGATACTCTTGAAGAGTTTATTGAAGATAAAAAAATAACATCTATTGTAGGTACCACTGGT
ACTGCTGGTGGAAGTTATAATATAAAAAGAATTCCAATAACTCCAGATGAATTAGGAAAAACTATGCATGTTAATGGAAA
TATTGCATTACTCTTTGGAAGAGAAGGTGATGGTCTTAATAACCAAGAAATAGAACAGTGTGATATTCTAGTAACTATAC
CAACAAGTGATGAATATCCAATTATGAACATAACCCATGCTGCAGCCATTATTTTTTATGAAATATTTAAAAATAAGAAA
AGTTATCCAATAGATGACATGGATATTTCAAGTTATGATGATAAAAAAGTATTAACTAATCTAACCAATGAAATTATCTC
AAAATTAGATTATCCAGAACATAAAGAAAAACAAGTGAAAATAATTGTAAAAAGAATAATAGGTAGAGCATTTATAGCTG
GACGTGAATCACAAACATTACGTGGAACACTAAAACGTATAAATACACGAATCAAAAATAAAACTCATGAGGAGTAA

Upstream 100 bases:

>100_bases
AAAATATAATATTTATAAATCTATGTAAAAAAGACCTATTCAATATTTACAGTTAATTATTTTAAATAAATTAAGACAAA
ATATATAGTAGTGATTCTAA

Downstream 100 bases:

>100_bases
AACATGGCAATACTTAGTGATAAGGATATTAAAAAATATTTAGATGAAGGTCGTATTGTAATTGATCCAATTACTAATGA
AAAACAGATACAACCATCAT

Product: rRNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKIYTVFVEPKTSGNIGFLARTMKNFGLKKLVLINPCKLENDAYYQAMHARELVQDAMIYDTLEEFIEDKKITSIVGTTG
TAGGSYNIKRIPITPDELGKTMHVNGNIALLFGREGDGLNNQEIEQCDILVTIPTSDEYPIMNITHAAAIIFYEIFKNKK
SYPIDDMDISSYDDKKVLTNLTNEIISKLDYPEHKEKQVKIIVKRIIGRAFIAGRESQTLRGTLKRINTRIKNKTHEE

Sequences:

>Translated_238_residues
MKIYTVFVEPKTSGNIGFLARTMKNFGLKKLVLINPCKLENDAYYQAMHARELVQDAMIYDTLEEFIEDKKITSIVGTTG
TAGGSYNIKRIPITPDELGKTMHVNGNIALLFGREGDGLNNQEIEQCDILVTIPTSDEYPIMNITHAAAIIFYEIFKNKK
SYPIDDMDISSYDDKKVLTNLTNEIISKLDYPEHKEKQVKIIVKRIIGRAFIAGRESQTLRGTLKRINTRIKNKTHEE
>Mature_238_residues
MKIYTVFVEPKTSGNIGFLARTMKNFGLKKLVLINPCKLENDAYYQAMHARELVQDAMIYDTLEEFIEDKKITSIVGTTG
TAGGSYNIKRIPITPDELGKTMHVNGNIALLFGREGDGLNNQEIEQCDILVTIPTSDEYPIMNITHAAAIIFYEIFKNKK
SYPIDDMDISSYDDKKVLTNLTNEIISKLDYPEHKEKQVKIIVKRIIGRAFIAGRESQTLRGTLKRINTRIKNKTHEE

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=253, Percent_Identity=29.2490118577075, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1790865, Length=161, Percent_Identity=27.9503105590062, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27064; Mature: 27064

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYTVFVEPKTSGNIGFLARTMKNFGLKKLVLINPCKLENDAYYQAMHARELVQDAMIY
CEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
DTLEEFIEDKKITSIVGTTGTAGGSYNIKRIPITPDELGKTMHVNGNIALLFGREGDGLN
HHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCHHHHCCEEEECCCEEEEECCCCCCCC
NQEIEQCDILVTIPTSDEYPIMNITHAAAIIFYEIFKNKKSYPIDDMDISSYDDKKVLTN
CCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LTNEIISKLDYPEHKEKQVKIIVKRIIGRAFIAGRESQTLRGTLKRINTRIKNKTHEE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIYTVFVEPKTSGNIGFLARTMKNFGLKKLVLINPCKLENDAYYQAMHARELVQDAMIY
CEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
DTLEEFIEDKKITSIVGTTGTAGGSYNIKRIPITPDELGKTMHVNGNIALLFGREGDGLN
HHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCHHHHCCEEEECCCEEEEECCCCCCCC
NQEIEQCDILVTIPTSDEYPIMNITHAAAIIFYEIFKNKKSYPIDDMDISSYDDKKVLTN
CCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LTNEIISKLDYPEHKEKQVKIIVKRIIGRAFIAGRESQTLRGTLKRINTRIKNKTHEE
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]