Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489832

Identifier: 84489832

GI number: 84489832

Start: 1182186

End: 1182731

Strand: Direct

Name: 84489832

Synonym: Msp_1037

Alternate gene names: NA

Gene position: 1182186-1182731 (Clockwise)

Preceding gene: 84489831

Following gene: 84489834

Centisome position: 66.89

GC content: 24.91

Gene sequence:

>546_bases
ATGAATTCAAAAGAAATTATTGGAATGAAAATAATAGATAAAAATGCAAAAGATGTTGCAAAAATAGCAGAAATTAGTTT
TGACACAAAAACATATGGAATAACAAAAATAATTGCTTCAACTGGAAATCCTATAAGTAAAAAATTTTATGAAATAGATC
CTAAAAATATACTTGCATTAGGAGATTATTTATTAATTGACACAACTGTTGAAGAATTATCTCAAAATAAATTAGATAAA
ATACCTGAATCTACAGGAACAAACATAAAAATTAATGAAAGTGTTGGAAAAACTGTAATTGATGCTGATGGAAATGTTGC
TGGTAAAATAGCTAATATTGATATTAACTTTGATAATCTTGAAGTTGAAAATGTAACTCTTGCAAAATCTTCATCATTTG
GAAAACCAAAGGATATCTACACATTATCTAAAGAGGATATTGAAAGATTTGGAGATTATGTTATTACTAATAAAAAAATT
CCAAATTCAGAAAAAGTAGATGAAGAATCTGAAAAAACAGAAGAAAAAACCGTGGATATTGAATAA

Upstream 100 bases:

>100_bases
AAACAAGTTATTTCTGTAGATACCAACACCACATTTAATAAATAAATATTTAAACTATTATATTATATAAAAAAAATATA
TTATCATACGAGGGGATAAT

Downstream 100 bases:

>100_bases
GAATAAAAATATTTATTCTTAATTATTTTTTTTATATTAACTTTTTTAATTCATCTAAATTTAATTTAATAAAATCCCTA
GCTTTATAATCAGACAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILALGDYLLIDTTVEELSQNKLDK
IPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNLEVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKI
PNSEKVDEESEKTEEKTVDIE

Sequences:

>Translated_181_residues
MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILALGDYLLIDTTVEELSQNKLDK
IPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNLEVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKI
PNSEKVDEESEKTEEKTVDIE
>Mature_181_residues
MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILALGDYLLIDTTVEELSQNKLDK
IPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNLEVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKI
PNSEKVDEESEKTEEKTVDIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20038; Mature: 20038

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILAL
CCCCEEEEEEEECCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCHHHEEEECCCCEEEE
GDYLLIDTTVEELSQNKLDKIPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNL
CCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEEEEEEEEEECCCE
EVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKIPNSEKVDEESEKTEEKTVDI
EEEEEEEECCCCCCCCCCEEEECHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHEECC
E
C
>Mature Secondary Structure
MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILAL
CCCCEEEEEEEECCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCHHHEEEECCCCEEEE
GDYLLIDTTVEELSQNKLDKIPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNL
CCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEEEEEEEEEECCCE
EVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKIPNSEKVDEESEKTEEKTVDI
EEEEEEEECCCCCCCCCCEEEECHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHEECC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA