| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489832
Identifier: 84489832
GI number: 84489832
Start: 1182186
End: 1182731
Strand: Direct
Name: 84489832
Synonym: Msp_1037
Alternate gene names: NA
Gene position: 1182186-1182731 (Clockwise)
Preceding gene: 84489831
Following gene: 84489834
Centisome position: 66.89
GC content: 24.91
Gene sequence:
>546_bases ATGAATTCAAAAGAAATTATTGGAATGAAAATAATAGATAAAAATGCAAAAGATGTTGCAAAAATAGCAGAAATTAGTTT TGACACAAAAACATATGGAATAACAAAAATAATTGCTTCAACTGGAAATCCTATAAGTAAAAAATTTTATGAAATAGATC CTAAAAATATACTTGCATTAGGAGATTATTTATTAATTGACACAACTGTTGAAGAATTATCTCAAAATAAATTAGATAAA ATACCTGAATCTACAGGAACAAACATAAAAATTAATGAAAGTGTTGGAAAAACTGTAATTGATGCTGATGGAAATGTTGC TGGTAAAATAGCTAATATTGATATTAACTTTGATAATCTTGAAGTTGAAAATGTAACTCTTGCAAAATCTTCATCATTTG GAAAACCAAAGGATATCTACACATTATCTAAAGAGGATATTGAAAGATTTGGAGATTATGTTATTACTAATAAAAAAATT CCAAATTCAGAAAAAGTAGATGAAGAATCTGAAAAAACAGAAGAAAAAACCGTGGATATTGAATAA
Upstream 100 bases:
>100_bases AAACAAGTTATTTCTGTAGATACCAACACCACATTTAATAAATAAATATTTAAACTATTATATTATATAAAAAAAATATA TTATCATACGAGGGGATAAT
Downstream 100 bases:
>100_bases GAATAAAAATATTTATTCTTAATTATTTTTTTTATATTAACTTTTTTAATTCATCTAAATTTAATTTAATAAAATCCCTA GCTTTATAATCAGACAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILALGDYLLIDTTVEELSQNKLDK IPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNLEVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKI PNSEKVDEESEKTEEKTVDIE
Sequences:
>Translated_181_residues MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILALGDYLLIDTTVEELSQNKLDK IPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNLEVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKI PNSEKVDEESEKTEEKTVDIE >Mature_181_residues MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILALGDYLLIDTTVEELSQNKLDK IPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNLEVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKI PNSEKVDEESEKTEEKTVDIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20038; Mature: 20038
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILAL CCCCEEEEEEEECCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCHHHEEEECCCCEEEE GDYLLIDTTVEELSQNKLDKIPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNL CCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEEEEEEEEEECCCE EVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKIPNSEKVDEESEKTEEKTVDI EEEEEEEECCCCCCCCCCEEEECHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHEECC E C >Mature Secondary Structure MNSKEIIGMKIIDKNAKDVAKIAEISFDTKTYGITKIIASTGNPISKKFYEIDPKNILAL CCCCEEEEEEEECCCHHHHHHHHHHCCCCCHHHHEEEEECCCCCCHHHEEEECCCCEEEE GDYLLIDTTVEELSQNKLDKIPESTGTNIKINESVGKTVIDADGNVAGKIANIDINFDNL CCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCEEEEEEEEEEECCCE EVENVTLAKSSSFGKPKDIYTLSKEDIERFGDYVITNKKIPNSEKVDEESEKTEEKTVDI EEEEEEEECCCCCCCCCCEEEECHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHEECC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA