Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489644

Identifier: 84489644

GI number: 84489644

Start: 979815

End: 980345

Strand: Direct

Name: 84489644

Synonym: Msp_0844

Alternate gene names: NA

Gene position: 979815-980345 (Clockwise)

Preceding gene: 84489636

Following gene: 84489645

Centisome position: 55.44

GC content: 28.63

Gene sequence:

>531_bases
ATGAAAGTATTAGGAGTTGTAGGAAGTCCTAGAAAAGATGGTAATTGTGATGTTTTAGTAAAAGAATTTTTAGATGCTGC
TGATGCAGATACAGAATATATCTTTTTAAATCATAAAAAGTTATTTGGATGTAATGCATGTATGGCTTGTGAAAATGGTG
ATTGTGTTATTGATGATGATGGTAATGATATTATTAAATCATTGTTAGATGCTGATGTTTTAGTATTTGCAACACCTATA
TATTATGGTCAAATGTCTGCTCAGGCTAAAGCATTTGTTGATAGATTCTACCAAATTTCTAGAAATGAAAATAAATCACT
TGAAGGTAAAAAAGTTGTAACTATCTTTACACAAGCTCAACCTGAAAATGTATTTGGTGATTATATTGATTCATTTAAAG
TAATGCCTTTTGGATATATGGGTATGGAAGTTATTGGTAATGTTACTGCTATGGGTACTTCATCTAAAGGAGATAAAGAA
GAATTAGCTAAATATATTGATGAAGTAAAAAGTATTGCTTCAAAATTATAA

Upstream 100 bases:

>100_bases
TTATTTATGAATTTTCATGTATGGTTTTATTATATTATAAATACAAATATAATAATACAATACTGATTTATGTATTAATA
TAATAAGGAGGATAATAGTT

Downstream 100 bases:

>100_bases
TCTCTCTTCTCTTTTTTTATTTTTTTTTTATTTGTGTTATTTTATATTAAATATTTATGTTTGTTAGGAGGAAACTTTTT
TTGATAGAGAAAATTAAATT

Product: multimeric flavodoxin

Products: NA

Alternate protein names: Isf-2; MCJ-2; Mj2 [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDDGNDIIKSLLDADVLVFATPI
YYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQPENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKE
ELAKYIDEVKSIASKL

Sequences:

>Translated_176_residues
MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDDGNDIIKSLLDADVLVFATPI
YYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQPENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKE
ELAKYIDEVKSIASKL
>Mature_176_residues
MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDDGNDIIKSLLDADVLVFATPI
YYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQPENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKE
ELAKYIDEVKSIASKL

Specific function: Redox-active protein probably involved in electron transport [H]

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family. Isf subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 19373; Mature: 19373

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDD
CEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEECCCEEEEECCCCEEEECC
GNDIIKSLLDADVLVFATPIYYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQ
CHHHHHHHHCCCEEEEECHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC
PENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKEELAKYIDEVKSIASKL
CCHHHHHHHHCEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLGVVGSPRKDGNCDVLVKEFLDAADADTEYIFLNHKKLFGCNACMACENGDCVIDDD
CEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEECCCEEEEECCCCEEEECC
GNDIIKSLLDADVLVFATPIYYGQMSAQAKAFVDRFYQISRNENKSLEGKKVVTIFTQAQ
CHHHHHHHHCCCEEEEECHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC
PENVFGDYIDSFKVMPFGYMGMEVIGNVTAMGTSSKGDKEELAKYIDEVKSIASKL
CCHHHHHHHHCEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]