| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489577
Identifier: 84489577
GI number: 84489577
Start: 899600
End: 900874
Strand: Direct
Name: 84489577
Synonym: Msp_0773
Alternate gene names: NA
Gene position: 899600-900874 (Clockwise)
Preceding gene: 84489576
Following gene: 84489578
Centisome position: 50.9
GC content: 25.18
Gene sequence:
>1275_bases ATGCAAGAATGCCCATATTGTGGTCAACTAAATAGTGATTTTGAAGATAGATGTGTATATTGTGGAGAACTACTTTATAT TCAAGTTGAACATGATGATGAAGAAACAAGTAATGATATAAATGAGATAAATCATCAATATGCAGATAAAATAGCACAAG AACTTCTTAAAGATGAGAACAATAAACAAACCAAAACTTTTGATGATTTAGATGAGTTTACTAGGGAATTATTAAGTCCT ACAGATATTTCTGATGAAAGTGTATCTATATCTGATAATGATGATTCATATTATTTTGAAGAAGATAACAATGATACAAT TACCAATGAATCATTTAATGATACTAATATGTTTGAAGAAACACTTGCAGATATAACTACAGATTTTACAGAAGATAATG AAGACACCTACTTTGAATATGAAACTGAAGATGTTCCTGAAGTACATGAAAAAACAAGAGAAAAACTTATAGAAATAGAA TCTAAACTAAAAAAGAAGATCAAAAGAAATAAAAAACTTGAAACAAGATTAGGCTTAAGTTTTAAAAATATAGCTCTTGT AATTAATAATATAAATGGACCAATAGAAGTCTTAGGTAGTGTATCTACAAATACTGTATATAATAATCATTGCCTTAAAT TATCAGTAATATGTTATGATAATGATTTTAAGGAAATTGAACGTAATTCTACTCTTATTATAATGAATTCATTGAAAAGA TATTATGATTTCAATTTAATTCTTAAACCAGACATATCTAAAACATCAATATTAATACTACTACCAGAAATTGTTGATAA ACTACCAGATGCTATTAATGAAGTAGATAAAAAGAATACACAAAATATATCTAAAAATAATAATATATCAAGAAACTTAC AAAAACCTAAAAATAAACAAGTTAAAAAGAATACACAAGCAAAAAAAATAGATTCAAGAAAATCGGTGGCTGTTGAAACA TCAAATTCCATATTCATTGAACAAATGAAGAATATTGAACATAGAATTGGTATGAATATAACTAATACTTCTGTTCTTAT AAAATCCAATAGTTATTTAGAAGTTGTTGGTGAAATATATATTAAAAGTCCAGATAAATATAATGATATAAAAATAGCTG CAACATGTTATGACAAAAATAATAAGATCATTGCAACAGAAAGTACTCATATAAATACTAAGTTATATCTAGGATTTGAC ACTCTATGCTTAAAATTAAAGGATGTTGATGTGTGTAGAGTTGAACGTATACGATTATATCCAACATTTCAATAG
Upstream 100 bases:
>100_bases CTCTACTATTATCAATAGTATCAGTATAATTTATATAAAAGGTTATAAAATAGTTTAATGAAAATTAGTATATATAGAAG AAATATAGGATGTAATTATA
Downstream 100 bases:
>100_bases TTAATCTACTTTTTCTCATTTTTTTAAATCATCATATGATAATATTATCAAATGAGTATAATTTTATCATAGATATAAAA TAAAAACTTCCTTTTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MQECPYCGQLNSDFEDRCVYCGELLYIQVEHDDEETSNDINEINHQYADKIAQELLKDENNKQTKTFDDLDEFTRELLSP TDISDESVSISDNDDSYYFEEDNNDTITNESFNDTNMFEETLADITTDFTEDNEDTYFEYETEDVPEVHEKTREKLIEIE SKLKKKIKRNKKLETRLGLSFKNIALVINNINGPIEVLGSVSTNTVYNNHCLKLSVICYDNDFKEIERNSTLIIMNSLKR YYDFNLILKPDISKTSILILLPEIVDKLPDAINEVDKKNTQNISKNNNISRNLQKPKNKQVKKNTQAKKIDSRKSVAVET SNSIFIEQMKNIEHRIGMNITNTSVLIKSNSYLEVVGEIYIKSPDKYNDIKIAATCYDKNNKIIATESTHINTKLYLGFD TLCLKLKDVDVCRVERIRLYPTFQ
Sequences:
>Translated_424_residues MQECPYCGQLNSDFEDRCVYCGELLYIQVEHDDEETSNDINEINHQYADKIAQELLKDENNKQTKTFDDLDEFTRELLSP TDISDESVSISDNDDSYYFEEDNNDTITNESFNDTNMFEETLADITTDFTEDNEDTYFEYETEDVPEVHEKTREKLIEIE SKLKKKIKRNKKLETRLGLSFKNIALVINNINGPIEVLGSVSTNTVYNNHCLKLSVICYDNDFKEIERNSTLIIMNSLKR YYDFNLILKPDISKTSILILLPEIVDKLPDAINEVDKKNTQNISKNNNISRNLQKPKNKQVKKNTQAKKIDSRKSVAVET SNSIFIEQMKNIEHRIGMNITNTSVLIKSNSYLEVVGEIYIKSPDKYNDIKIAATCYDKNNKIIATESTHINTKLYLGFD TLCLKLKDVDVCRVERIRLYPTFQ >Mature_424_residues MQECPYCGQLNSDFEDRCVYCGELLYIQVEHDDEETSNDINEINHQYADKIAQELLKDENNKQTKTFDDLDEFTRELLSP TDISDESVSISDNDDSYYFEEDNNDTITNESFNDTNMFEETLADITTDFTEDNEDTYFEYETEDVPEVHEKTREKLIEIE SKLKKKIKRNKKLETRLGLSFKNIALVINNINGPIEVLGSVSTNTVYNNHCLKLSVICYDNDFKEIERNSTLIIMNSLKR YYDFNLILKPDISKTSILILLPEIVDKLPDAINEVDKKNTQNISKNNNISRNLQKPKNKQVKKNTQAKKIDSRKSVAVET SNSIFIEQMKNIEHRIGMNITNTSVLIKSNSYLEVVGEIYIKSPDKYNDIKIAATCYDKNNKIIATESTHINTKLYLGFD TLCLKLKDVDVCRVERIRLYPTFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49169; Mature: 49169
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQECPYCGQLNSDFEDRCVYCGELLYIQVEHDDEETSNDINEINHQYADKIAQELLKDEN CCCCCCCCCCCCCHHHHHEEECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC NKQTKTFDDLDEFTRELLSPTDISDESVSISDNDDSYYFEEDNNDTITNESFNDTNMFEE CCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHH TLADITTDFTEDNEDTYFEYETEDVPEVHEKTREKLIEIESKLKKKIKRNKKLETRLGLS HHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC FKNIALVINNINGPIEVLGSVSTNTVYNNHCLKLSVICYDNDFKEIERNSTLIIMNSLKR EEEEEEEEECCCCCCCEEECCCCCEEECCCEEEEEEEEECCCHHHHHCCCEEEEEEHHHH YYDFNLILKPDISKTSILILLPEIVDKLPDAINEVDKKNTQNISKNNNISRNLQKPKNKQ HHCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHH VKKNTQAKKIDSRKSVAVETSNSIFIEQMKNIEHRIGMNITNTSVLIKSNSYLEVVGEIY HHHCCHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEECCEEEEECCCCEEEEEEEE IKSPDKYNDIKIAATCYDKNNKIIATESTHINTKLYLGFDTLCLKLKDVDVCRVERIRLY ECCCCCCCCEEEEEEEEECCCEEEEECCCEECEEEEEEHHHEEEEECCCCEEEEEEEEEE PTFQ ECCC >Mature Secondary Structure MQECPYCGQLNSDFEDRCVYCGELLYIQVEHDDEETSNDINEINHQYADKIAQELLKDEN CCCCCCCCCCCCCHHHHHEEECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC NKQTKTFDDLDEFTRELLSPTDISDESVSISDNDDSYYFEEDNNDTITNESFNDTNMFEE CCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHH TLADITTDFTEDNEDTYFEYETEDVPEVHEKTREKLIEIESKLKKKIKRNKKLETRLGLS HHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC FKNIALVINNINGPIEVLGSVSTNTVYNNHCLKLSVICYDNDFKEIERNSTLIIMNSLKR EEEEEEEEECCCCCCCEEECCCCCEEECCCEEEEEEEEECCCHHHHHCCCEEEEEEHHHH YYDFNLILKPDISKTSILILLPEIVDKLPDAINEVDKKNTQNISKNNNISRNLQKPKNKQ HHCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCHH VKKNTQAKKIDSRKSVAVETSNSIFIEQMKNIEHRIGMNITNTSVLIKSNSYLEVVGEIY HHHCCHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEECCEEEEECCCCEEEEEEEE IKSPDKYNDIKIAATCYDKNNKIIATESTHINTKLYLGFDTLCLKLKDVDVCRVERIRLY ECCCCCCCCEEEEEEEEECCCEEEEECCCEECEEEEEEHHHEEEEECCCCEEEEEEEEEE PTFQ ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA