Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489576

Identifier: 84489576

GI number: 84489576

Start: 898926

End: 899528

Strand: Direct

Name: 84489576

Synonym: Msp_0772

Alternate gene names: NA

Gene position: 898926-899528 (Clockwise)

Preceding gene: 84489575

Following gene: 84489577

Centisome position: 50.86

GC content: 24.21

Gene sequence:

>603_bases
TTGAAAGAAATATTTACAATAGATTATATAAAAAGTTACATATCACGTAATGCAAATTATTTTATAATTTCAATTATAAT
ATTTCTAATATCAGCATTATTAGGTTTTTATTTTAATAATTATTTTAATAATATATTACCCGACCATTTTCGTATGGCAA
CAAGTATCATTGATGAAATTAGTGTGGATTTTAGAGATATATTTATACATAACATATTCATTGATTTATCTGTTGTTTTT
AATGGATTTTTATTTTCAATAGATTCAATTATAACAACAGTTTTAAATGGAGTACTACTTGGATATGCTTTCTCAAGAGT
TAACACAATATTGTTTGTTGTTGGAATTACACCACATGGAATCTTTGAAATACCATCAAGTATCATAGCAATGGGTGGCT
CATTAATAGCAACTAGATGGGAAATTCACATGTTAAACTCCATTATCTCAAAAAAACATACATTTCGTGAAGAATTTAAA
AAATATAAATATATGTTAAAGGATATACTAGCCACTGTTATTTATGTTTTTATTTTATTAATTATAGCTGCTGCTATTGA
ATCTACAATAACACCTCTACTATTATCAATAGTATCAGTATAA

Upstream 100 bases:

>100_bases
AAAATTAATCACTAAAATACAATAAACTTATTAACTTATATAATTAAAAGTAAAATTATAGTTTTTTAAAAAAAGGGAGG
TTAAAAAAATATTATTAAAT

Downstream 100 bases:

>100_bases
TTTATATAAAAGGTTATAAAATAGTTTAATGAAAATTAGTATATATAGAAGAAATATAGGATGTAATTATAATGCAAGAA
TGCCCATATTGTGGTCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKEIFTIDYIKSYISRNANYFIISIIIFLISALLGFYFNNYFNNILPDHFRMATSIIDEISVDFRDIFIHNIFIDLSVVF
NGFLFSIDSIITTVLNGVLLGYAFSRVNTILFVVGITPHGIFEIPSSIIAMGGSLIATRWEIHMLNSIISKKHTFREEFK
KYKYMLKDILATVIYVFILLIIAAAIESTITPLLLSIVSV

Sequences:

>Translated_200_residues
MKEIFTIDYIKSYISRNANYFIISIIIFLISALLGFYFNNYFNNILPDHFRMATSIIDEISVDFRDIFIHNIFIDLSVVF
NGFLFSIDSIITTVLNGVLLGYAFSRVNTILFVVGITPHGIFEIPSSIIAMGGSLIATRWEIHMLNSIISKKHTFREEFK
KYKYMLKDILATVIYVFILLIIAAAIESTITPLLLSIVSV
>Mature_200_residues
MKEIFTIDYIKSYISRNANYFIISIIIFLISALLGFYFNNYFNNILPDHFRMATSIIDEISVDFRDIFIHNIFIDLSVVF
NGFLFSIDSIITTVLNGVLLGYAFSRVNTILFVVGITPHGIFEIPSSIIAMGGSLIATRWEIHMLNSIISKKHTFREEFK
KYKYMLKDILATVIYVFILLIIAAAIESTITPLLLSIVSV

Specific function: Unknown

COG id: COG1300

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22841; Mature: 22841

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIFTIDYIKSYISRNANYFIISIIIFLISALLGFYFNNYFNNILPDHFRMATSIIDEI
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
SVDFRDIFIHNIFIDLSVVFNGFLFSIDSIITTVLNGVLLGYAFSRVNTILFVVGITPHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
IFEIPSSIIAMGGSLIATRWEIHMLNSIISKKHTFREEFKKYKYMLKDILATVIYVFILL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIAAAIESTITPLLLSIVSV
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEIFTIDYIKSYISRNANYFIISIIIFLISALLGFYFNNYFNNILPDHFRMATSIIDEI
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
SVDFRDIFIHNIFIDLSVVFNGFLFSIDSIITTVLNGVLLGYAFSRVNTILFVVGITPHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
IFEIPSSIIAMGGSLIATRWEIHMLNSIISKKHTFREEFKKYKYMLKDILATVIYVFILL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIAAAIESTITPLLLSIVSV
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA