Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489508

Identifier: 84489508

GI number: 84489508

Start: 809320

End: 810252

Strand: Direct

Name: 84489508

Synonym: Msp_0699

Alternate gene names: NA

Gene position: 809320-810252 (Clockwise)

Preceding gene: 84489505

Following gene: 84489509

Centisome position: 45.79

GC content: 24.65

Gene sequence:

>933_bases
ATGGATGATGAATATCTAAAACAATTAGACAATACTTTAAAAGAGTATGTTGCAACTATAACAAATAATATTACATTAAT
AAATAATATTATTGATAAGAATGATTTATTTGGTGTTTCTAAAGAGATTACTGAACTTTACAAAAGAACAGATGATTTAT
CTAAAACATATAAACAGTTAGATGAAAAAGTAATTAAATCACTAGCAAAACAAGAACAGATATTAAATGTAATGGGAAAC
TCTAAAAATTTTCAAAAACCATCAAAACTAAAAACTCAATTAAAAAAATCCAAATATGTGGCAGTGAAAATAAATTCTGA
AAGGGAAAAGAGAAGTGGGGTAACGTTACATGATTTTAAAATAAAAAAAACCAAGACAAGACAAGGAAATTTCTTCATAA
TAGATGGTAATGTTTTTACAAAAGATTGTAAAGAATTAGATATAAATGTTTTTTTTGAAATATATGATAAAAATGGGGAA
TTGGTGGATAAAGACTATGATTTTATATCAGTAAGTAGAGAAAATCCGCTTCAGGAGGTATCAATGTCTTTTGATGTTAA
AGATTTAGATTCAATAAAAGTAGTGAATGTATATCCTGAAATAAATAATAATCAAAATATATTTGATTATCAAAGTGTTG
ATTTGGATAATAGTAGAAATAGAAAAGAAACTCAACCAACTAAATCAATTCCAACCGAGTCATTCTCATTAGTTAATATA
AATACTGCAGGTGTAAATGAATTATCAAAACTTCCTGGAATAAATATGATACTTGCAAAAAAATTAATTCAACTACGTCA
AGATGGATATATTGTAACTTCTCTTAATGATCTAGGCCAAAAACTAAATTTAAAAGAGTTTGAATTAGAACAATTAGAAC
CATATATAACAATAGAACAAGATACTAGAAAAAGTAGAACATTAGATATATAA

Upstream 100 bases:

>100_bases
CAGAAAAAAATCCAAAAGAATTTAAAAAAAAATATTTAAAATAGATATAAACAAGTCAATAAAATAAACCTACAATATTC
AAAGTATCGGTGGTGATAAT

Downstream 100 bases:

>100_bases
TCTAACTTTTATTTTATATATAAAAAAAATAATTAGGAGTACTTTTTAAAAATGAAAAAATTTTTTATCTTTGACTTTGA
TGGAACACTAGTTAATACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQLDEKVIKSLAKQEQILNVMGN
SKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFKIKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGE
LVDKDYDFISVSRENPLQEVSMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI
NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQDTRKSRTLDI

Sequences:

>Translated_310_residues
MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQLDEKVIKSLAKQEQILNVMGN
SKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFKIKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGE
LVDKDYDFISVSRENPLQEVSMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI
NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQDTRKSRTLDI
>Mature_310_residues
MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQLDEKVIKSLAKQEQILNVMGN
SKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFKIKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGE
LVDKDYDFISVSRENPLQEVSMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI
NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQDTRKSRTLDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35876; Mature: 35876

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQL
CCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
DEKVIKSLAKQEQILNVMGNSKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFK
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCEEEEEE
IKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGELVDKDYDFISVSRENPLQEV
EEECCCCCCCEEEEECCEEECCHHHCCEEEEEEEECCCCCEECCCCCEEEECCCCCHHHH
SMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI
HHCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE
NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQ
CCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHCCCEEEEEC
DTRKSRTLDI
CCCCCCCCCC
>Mature Secondary Structure
MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQL
CCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
DEKVIKSLAKQEQILNVMGNSKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFK
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCEEEEEE
IKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGELVDKDYDFISVSRENPLQEV
EEECCCCCCCEEEEECCEEECCHHHCCEEEEEEEECCCCCEECCCCCEEEECCCCCHHHH
SMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI
HHCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE
NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQ
CCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHCCCEEEEEC
DTRKSRTLDI
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA