| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489508
Identifier: 84489508
GI number: 84489508
Start: 809320
End: 810252
Strand: Direct
Name: 84489508
Synonym: Msp_0699
Alternate gene names: NA
Gene position: 809320-810252 (Clockwise)
Preceding gene: 84489505
Following gene: 84489509
Centisome position: 45.79
GC content: 24.65
Gene sequence:
>933_bases ATGGATGATGAATATCTAAAACAATTAGACAATACTTTAAAAGAGTATGTTGCAACTATAACAAATAATATTACATTAAT AAATAATATTATTGATAAGAATGATTTATTTGGTGTTTCTAAAGAGATTACTGAACTTTACAAAAGAACAGATGATTTAT CTAAAACATATAAACAGTTAGATGAAAAAGTAATTAAATCACTAGCAAAACAAGAACAGATATTAAATGTAATGGGAAAC TCTAAAAATTTTCAAAAACCATCAAAACTAAAAACTCAATTAAAAAAATCCAAATATGTGGCAGTGAAAATAAATTCTGA AAGGGAAAAGAGAAGTGGGGTAACGTTACATGATTTTAAAATAAAAAAAACCAAGACAAGACAAGGAAATTTCTTCATAA TAGATGGTAATGTTTTTACAAAAGATTGTAAAGAATTAGATATAAATGTTTTTTTTGAAATATATGATAAAAATGGGGAA TTGGTGGATAAAGACTATGATTTTATATCAGTAAGTAGAGAAAATCCGCTTCAGGAGGTATCAATGTCTTTTGATGTTAA AGATTTAGATTCAATAAAAGTAGTGAATGTATATCCTGAAATAAATAATAATCAAAATATATTTGATTATCAAAGTGTTG ATTTGGATAATAGTAGAAATAGAAAAGAAACTCAACCAACTAAATCAATTCCAACCGAGTCATTCTCATTAGTTAATATA AATACTGCAGGTGTAAATGAATTATCAAAACTTCCTGGAATAAATATGATACTTGCAAAAAAATTAATTCAACTACGTCA AGATGGATATATTGTAACTTCTCTTAATGATCTAGGCCAAAAACTAAATTTAAAAGAGTTTGAATTAGAACAATTAGAAC CATATATAACAATAGAACAAGATACTAGAAAAAGTAGAACATTAGATATATAA
Upstream 100 bases:
>100_bases CAGAAAAAAATCCAAAAGAATTTAAAAAAAAATATTTAAAATAGATATAAACAAGTCAATAAAATAAACCTACAATATTC AAAGTATCGGTGGTGATAAT
Downstream 100 bases:
>100_bases TCTAACTTTTATTTTATATATAAAAAAAATAATTAGGAGTACTTTTTAAAAATGAAAAAATTTTTTATCTTTGACTTTGA TGGAACACTAGTTAATACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQLDEKVIKSLAKQEQILNVMGN SKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFKIKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGE LVDKDYDFISVSRENPLQEVSMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQDTRKSRTLDI
Sequences:
>Translated_310_residues MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQLDEKVIKSLAKQEQILNVMGN SKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFKIKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGE LVDKDYDFISVSRENPLQEVSMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQDTRKSRTLDI >Mature_310_residues MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQLDEKVIKSLAKQEQILNVMGN SKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFKIKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGE LVDKDYDFISVSRENPLQEVSMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQDTRKSRTLDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35876; Mature: 35876
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQL CCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHH DEKVIKSLAKQEQILNVMGNSKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFK HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCEEEEEE IKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGELVDKDYDFISVSRENPLQEV EEECCCCCCCEEEEECCEEECCHHHCCEEEEEEEECCCCCEECCCCCEEEECCCCCHHHH SMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI HHCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQ CCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHCCCEEEEEC DTRKSRTLDI CCCCCCCCCC >Mature Secondary Structure MDDEYLKQLDNTLKEYVATITNNITLINNIIDKNDLFGVSKEITELYKRTDDLSKTYKQL CCHHHHHHHHHHHHHHHHHHHCCEEEEHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHH DEKVIKSLAKQEQILNVMGNSKNFQKPSKLKTQLKKSKYVAVKINSEREKRSGVTLHDFK HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCEEEEEE IKKTKTRQGNFFIIDGNVFTKDCKELDINVFFEIYDKNGELVDKDYDFISVSRENPLQEV EEECCCCCCCEEEEECCEEECCHHHCCEEEEEEEECCCCCEECCCCCEEEECCCCCHHHH SMSFDVKDLDSIKVVNVYPEINNNQNIFDYQSVDLDNSRNRKETQPTKSIPTESFSLVNI HHCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE NTAGVNELSKLPGINMILAKKLIQLRQDGYIVTSLNDLGQKLNLKEFELEQLEPYITIEQ CCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHCCCEEEEEC DTRKSRTLDI CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA