| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
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The map label for this gene is 84489505
Identifier: 84489505
GI number: 84489505
Start: 807070
End: 807531
Strand: Direct
Name: 84489505
Synonym: Msp_0696
Alternate gene names: NA
Gene position: 807070-807531 (Clockwise)
Preceding gene: 84489500
Following gene: 84489508
Centisome position: 45.66
GC content: 29.65
Gene sequence:
>462_bases ATGTACAATAAAATATTATTACCAGTGGATGGTTCAAAAAATTCTGAAAAAGCAATAAAACATGCAACTACATTAGCAAT TGATGAAGAAGCAGAAATAGTCATATTGTATGTGGTGGATCATAGAAGTTTAACAAGCCTTCCAGAAAATGCTCTAGAAG ATAAAGAACTAGCAGACTATGAAAAACAAGGGGAAGTAGTAACACAACGTGTAGTAGATCAAATAAATGGAATTATTAAA GAAACCTCTCCTGATAAAACAATAAAAACAGAAAAATTAATAGTAGAAGGAAATCCTGCAAACATCATAATAAAAGCTAT AGAAAAGAAAGATATTGACGTTGTTGTAATAGCAAATAGTGGAAAAAACTTTGTTGATAGATTCCTTATTGGAAGTGTAA CAGAAAGAATAATTAGATGTTCTACTGTACCAATTGTAGTAATACCAACAAAATCAGAGTAA
Upstream 100 bases:
>100_bases TATACGTAAATATTAGTTATTTTTTTTATTAGATAGAAAATATTTAAATTAAAACATAACATATTAATAAATAACTAATA AATAAGGATGGAGATGAAAA
Downstream 100 bases:
>100_bases AAAAAACTCTTTTTCAACTATTTTTTTTATATAGAAAACATTCATCTTCATGTGAATATATAACACCTATGGCTTGTAGA AATGAATAAATAATAGTAGG
Product: universal stress protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MYNKILLPVDGSKNSEKAIKHATTLAIDEEAEIVILYVVDHRSLTSLPENALEDKELADYEKQGEVVTQRVVDQINGIIK ETSPDKTIKTEKLIVEGNPANIIIKAIEKKDIDVVVIANSGKNFVDRFLIGSVTERIIRCSTVPIVVIPTKSE
Sequences:
>Translated_153_residues MYNKILLPVDGSKNSEKAIKHATTLAIDEEAEIVILYVVDHRSLTSLPENALEDKELADYEKQGEVVTQRVVDQINGIIK ETSPDKTIKTEKLIVEGNPANIIIKAIEKKDIDVVVIANSGKNFVDRFLIGSVTERIIRCSTVPIVVIPTKSE >Mature_153_residues MYNKILLPVDGSKNSEKAIKHATTLAIDEEAEIVILYVVDHRSLTSLPENALEDKELADYEKQGEVVTQRVVDQINGIIK ETSPDKTIKTEKLIVEGNPANIIIKAIEKKDIDVVVIANSGKNFVDRFLIGSVTERIIRCSTVPIVVIPTKSE
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16952; Mature: 16952
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNKILLPVDGSKNSEKAIKHATTLAIDEEAEIVILYVVDHRSLTSLPENALEDKELADY CCCEEEEEECCCCCHHHHHHHHHEEEECCCCCEEEEEEECCCCHHCCCCHHCCCCHHHCH EKQGEVVTQRVVDQINGIIKETSPDKTIKTEKLIVEGNPANIIIKAIEKKDIDVVVIANS HHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCEEEEEECC GKNFVDRFLIGSVTERIIRCSTVPIVVIPTKSE CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC >Mature Secondary Structure MYNKILLPVDGSKNSEKAIKHATTLAIDEEAEIVILYVVDHRSLTSLPENALEDKELADY CCCEEEEEECCCCCHHHHHHHHHEEEECCCCCEEEEEEECCCCHHCCCCHHCCCCHHHCH EKQGEVVTQRVVDQINGIIKETSPDKTIKTEKLIVEGNPANIIIKAIEKKDIDVVVIANS HHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCEEEEEECC GKNFVDRFLIGSVTERIIRCSTVPIVVIPTKSE CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]