| Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
|---|---|
| Accession | NC_007681 |
| Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is cpgS
Identifier: 84488958
GI number: 84488958
Start: 146702
End: 148087
Strand: Direct
Name: cpgS
Synonym: Msp_0129
Alternate gene names: 84488958
Gene position: 146702-148087 (Clockwise)
Preceding gene: 84488957
Following gene: 84488959
Centisome position: 8.3
GC content: 31.53
Gene sequence:
>1386_bases TTGAAATCAAAAAATTCTATGAGTGTATTGTGTTTAGTTGATGGAGAACATTATTTTCCAGTAACAAAATCGGCTGTTGA TAAAATAGAAAGTAAGGGTTATGACGTTAAATTACTCTTATTTATAGGTGGAACTGAAAAACTAAGGGATACAAATGTGG ATATAATTTCAGAAATGTTTAATAAACCTGTATTATTTGGTCAAGATCATAGTAAAGTTCCATATGACTTAATAGAAGAA TCTATAAAAGAATATGATGTGGGAATGGTTGTTGATTTATCTGATGAACCTGTTGTAAACTATTCAATAAGATTTAATAT AGCAACAATTGCACTACTTAATGGTTGTATGTATAAGGGATCTGATTTTGAATTTAAAGCATTAGAAGAGGAAGATGTAC TTAATAATCCATCATATAAAATTATAGGTACAGGTAAAAGAATTGGAAAAACTGCAGTTTCTGCATATACTGCTCGTCTT ATTAACAAGGATAGTGATTTTGTTCCATGTGTTGTTGCAATGGGAAGAGGTGGACCTCAAATACCTGAAATAGTACGTGG TGATAAAATACATTTAACTCCCAAATATCTTATGGAAAAATCTGATAAGGGCTTTCATGCAGCATCAGATCACTGGGAGG ATGCTTTAATGAGTAGAGTTTTAACAGTAGGTTGTAGAAGATGTGCTGGTGGAATGGCAGGTATGGTATATGAGACAAAC ATGGTTGAAGGAGCAATGATGACCAATGATTTGGATGTGAATCTTGTAGCACTAGAGGGTAGTGGTTCTGCAATACCTCC AGTAAAGGCTGATAAACAAATAGTTCTTGTTGGTGGCCATCAGCCAATGGAAACATTAACAGAATATTTTGGTCCATATA GAATTAAATTAGCAGATCTTATTATAATAACAATGTGTGATGAACAAATCTGTTCTAGGGAAAAATTAGATGATTTATTA ATTAAGATACATGAAATTAATCCAAATGCAGATATTGTTCCAACAATATTTAGGCCACATCCTGTAGATGATATATCTAA TAAAAATATTTTATTTGCAACAACTGCACCAGAATCAGTACAACATCTATTAAAGGACTATTTGGAAGAAAACTTTAATT GTAATGTAGTGGCTATTTCATCTCACTTGTCCAACAGACCTCTTCTTCAAAGGGATATTGAAGAAAATATTGATAACATT GACTGTATGCTTACAGAACTAAAGGCAGCAGCAGTAGATGTGGCAACTAAAGATGCATTAAATAAAGGTTTAGAAGTAGT TTATTGTGATAACATTCCAATAGCAATAAACGATGAGTATGATTTAGATAAATCAATAATGAATATTGTATATGAAGCAA AAGAAAGCTTTAATAAAAAAGATTAG
Upstream 100 bases:
>100_bases CTTTTAAATAATAATGTAAATAAAAATTATTATATACTTTATAAAAAAAGATTTTTTCATATTATGAATATTCAAAAGAA TTCATGTGGAGGGTATTTTA
Downstream 100 bases:
>100_bases TTTGAATGAATTAAGAAAGATACAAGTAGCTATAGTATTAATTTTTATAGAACTTCTAATAATTTAAAAAGTAATTGCTT AGATATAAATGAGTATACAG
Product: putative 2,3-diphosphoglycerate synthase
Products: NA
Alternate protein names: cDPGS
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKSKNSMSVLCLVDGEHYFPVTKSAVDKIESKGYDVKLLLFIGGTEKLRDTNVDIISEMFNKPVLFGQDHSKVPYDLIEE SIKEYDVGMVVDLSDEPVVNYSIRFNIATIALLNGCMYKGSDFEFKALEEEDVLNNPSYKIIGTGKRIGKTAVSAYTARL INKDSDFVPCVVAMGRGGPQIPEIVRGDKIHLTPKYLMEKSDKGFHAASDHWEDALMSRVLTVGCRRCAGGMAGMVYETN MVEGAMMTNDLDVNLVALEGSGSAIPPVKADKQIVLVGGHQPMETLTEYFGPYRIKLADLIIITMCDEQICSREKLDDLL IKIHEINPNADIVPTIFRPHPVDDISNKNILFATTAPESVQHLLKDYLEENFNCNVVAISSHLSNRPLLQRDIEENIDNI DCMLTELKAAAVDVATKDALNKGLEVVYCDNIPIAINDEYDLDKSIMNIVYEAKESFNKKD
Sequences:
>Translated_461_residues MKSKNSMSVLCLVDGEHYFPVTKSAVDKIESKGYDVKLLLFIGGTEKLRDTNVDIISEMFNKPVLFGQDHSKVPYDLIEE SIKEYDVGMVVDLSDEPVVNYSIRFNIATIALLNGCMYKGSDFEFKALEEEDVLNNPSYKIIGTGKRIGKTAVSAYTARL INKDSDFVPCVVAMGRGGPQIPEIVRGDKIHLTPKYLMEKSDKGFHAASDHWEDALMSRVLTVGCRRCAGGMAGMVYETN MVEGAMMTNDLDVNLVALEGSGSAIPPVKADKQIVLVGGHQPMETLTEYFGPYRIKLADLIIITMCDEQICSREKLDDLL IKIHEINPNADIVPTIFRPHPVDDISNKNILFATTAPESVQHLLKDYLEENFNCNVVAISSHLSNRPLLQRDIEENIDNI DCMLTELKAAAVDVATKDALNKGLEVVYCDNIPIAINDEYDLDKSIMNIVYEAKESFNKKD >Mature_461_residues MKSKNSMSVLCLVDGEHYFPVTKSAVDKIESKGYDVKLLLFIGGTEKLRDTNVDIISEMFNKPVLFGQDHSKVPYDLIEE SIKEYDVGMVVDLSDEPVVNYSIRFNIATIALLNGCMYKGSDFEFKALEEEDVLNNPSYKIIGTGKRIGKTAVSAYTARL INKDSDFVPCVVAMGRGGPQIPEIVRGDKIHLTPKYLMEKSDKGFHAASDHWEDALMSRVLTVGCRRCAGGMAGMVYETN MVEGAMMTNDLDVNLVALEGSGSAIPPVKADKQIVLVGGHQPMETLTEYFGPYRIKLADLIIITMCDEQICSREKLDDLL IKIHEINPNADIVPTIFRPHPVDDISNKNILFATTAPESVQHLLKDYLEENFNCNVVAISSHLSNRPLLQRDIEENIDNI DCMLTELKAAAVDVATKDALNKGLEVVYCDNIPIAINDEYDLDKSIMNIVYEAKESFNKKD
Specific function: Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP
COG id: COG2403
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyclic 2,3-diphosphoglycerate synthetase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CPGS_METST (Q2NHT6)
Other databases:
- EMBL: CP000102 - RefSeq: YP_447190.1 - STRING: Q2NHT6 - GeneID: 3855021 - GenomeReviews: CP000102_GR - KEGG: mst:Msp_0129 - NMPDR: fig|339860.6.peg.127 - eggNOG: arNOG04028 - HOGENOM: HBG539597 - OMA: LIDGEHY - ProtClustDB: CLSK785466 - BioCyc: MSTA339860:MSP_0129-MONOMER - GO: GO:0005737 - HAMAP: MF_01908 - InterPro: IPR016557 - PIRSF: PIRSF009445
Pfam domain/function: NA
EC number: 4.6.1.-
Molecular weight: Translated: 51303; Mature: 51303
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKNSMSVLCLVDGEHYFPVTKSAVDKIESKGYDVKLLLFIGGTEKLRDTNVDIISEMF CCCCCCEEEEEEECCCEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHCCCCHHHHHHHH NKPVLFGQDHSKVPYDLIEESIKEYDVGMVVDLSDEPVVNYSIRFNIATIALLNGCMYKG CCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEHHHEEHHHHHEECC SDFEFKALEEEDVLNNPSYKIIGTGKRIGKTAVSAYTARLINKDSDFVPCVVAMGRGGPQ CCCCEEECCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC IPEIVRGDKIHLTPKYLMEKSDKGFHAASDHWEDALMSRVLTVGCRRCAGGMAGMVYETN CHHHHCCCEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC MVEGAMMTNDLDVNLVALEGSGSAIPPVKADKQIVLVGGHQPMETLTEYFGPYRIKLADL CCCCEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEEE IIITMCDEQICSREKLDDLLIKIHEINPNADIVPTIFRPHPVDDISNKNILFATTAPESV EEEEECCHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHH QHLLKDYLEENFNCNVVAISSHLSNRPLLQRDIEENIDNIDCMLTELKAAAVDVATKDAL HHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH NKGLEVVYCDNIPIAINDEYDLDKSIMNIVYEAKESFNKKD HCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKSKNSMSVLCLVDGEHYFPVTKSAVDKIESKGYDVKLLLFIGGTEKLRDTNVDIISEMF CCCCCCEEEEEEECCCEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHCCCCHHHHHHHH NKPVLFGQDHSKVPYDLIEESIKEYDVGMVVDLSDEPVVNYSIRFNIATIALLNGCMYKG CCCEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEHHHEEHHHHHEECC SDFEFKALEEEDVLNNPSYKIIGTGKRIGKTAVSAYTARLINKDSDFVPCVVAMGRGGPQ CCCCEEECCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC IPEIVRGDKIHLTPKYLMEKSDKGFHAASDHWEDALMSRVLTVGCRRCAGGMAGMVYETN CHHHHCCCEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC MVEGAMMTNDLDVNLVALEGSGSAIPPVKADKQIVLVGGHQPMETLTEYFGPYRIKLADL CCCCEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEEE IIITMCDEQICSREKLDDLLIKIHEINPNADIVPTIFRPHPVDDISNKNILFATTAPESV EEEEECCHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHH QHLLKDYLEENFNCNVVAISSHLSNRPLLQRDIEENIDNIDCMLTELKAAAVDVATKDAL HHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH NKGLEVVYCDNIPIAINDEYDLDKSIMNIVYEAKESFNKKD HCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA