Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84488871

Identifier: 84488871

GI number: 84488871

Start: 43777

End: 44013

Strand: Direct

Name: 84488871

Synonym: Msp_0041

Alternate gene names: NA

Gene position: 43777-44013 (Clockwise)

Preceding gene: 84488868

Following gene: 84488872

Centisome position: 2.48

GC content: 26.58

Gene sequence:

>237_bases
ATGAAAGATAGTTTAAGTATAGATGATATAGACTTTGAAAAAGTAATAGATATGGGAAAATTTTCTTTATTTTTTTTAAG
TGGAGTTGCTGTAGGTTATGGTATTAAAAAAATAGTTGATTCAGAAGAATTTGAATCTTTAAAAAGTACAATTCTAGATT
CTATTGGTAACTCTGAAGATGAGGAAGTTCATCAAATTCCTATTAGTGATGTTGATGAAAGTTCTGAAGATGAATAG

Upstream 100 bases:

>100_bases
ATAATTTATCATTGTAAACACTTGTATATTTTAATAATTGTTATTATATTATAAATGATATATAAGTATAGTAAATAAGA
AAGTTTTTAGGTTGGATAAT

Downstream 100 bases:

>100_bases
ATAATATTTTTTATTTAACTTTTTTTTGGGGGATTATTTATTTACAAAGATAAAGTATCAATAATATTATTAAATTGGAA
TGGACATGAAGATACTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKDSLSIDDIDFEKVIDMGKFSLFFLSGVAVGYGIKKIVDSEEFESLKSTILDSIGNSEDEEVHQIPISDVDESSEDE

Sequences:

>Translated_78_residues
MKDSLSIDDIDFEKVIDMGKFSLFFLSGVAVGYGIKKIVDSEEFESLKSTILDSIGNSEDEEVHQIPISDVDESSEDE
>Mature_78_residues
MKDSLSIDDIDFEKVIDMGKFSLFFLSGVAVGYGIKKIVDSEEFESLKSTILDSIGNSEDEEVHQIPISDVDESSEDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8664; Mature: 8664

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSLSIDDIDFEKVIDMGKFSLFFLSGVAVGYGIKKIVDSEEFESLKSTILDSIGNSED
CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
EEVHQIPISDVDESSEDE
CHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKDSLSIDDIDFEKVIDMGKFSLFFLSGVAVGYGIKKIVDSEEFESLKSTILDSIGNSED
CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
EEVHQIPISDVDESSEDE
CHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA