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The map label for this gene is 84488866

Identifier: 84488866

GI number: 84488866

Start: 38180

End: 39928

Strand: Direct

Name: 84488866

Synonym: Msp_0036

Alternate gene names: NA

Gene position: 38180-39928 (Clockwise)

Preceding gene: 84488864

Following gene: 84488868

Centisome position: 2.16

GC content: 29.45

Gene sequence:

>1749_bases
ATGAATACGATATTTTGCCCAGATTGTGGAATGATAAGAAATAAATGCATATGTTCTAAGAAAGAGAAAAATCAAAATTC
CCTCATTAGTAGACCTTCTACTGAGGAAAAAGAGTCTCTTCAACAACAACATCCCCATATAGACGATGAAATAATTGAAA
ACTTTCCATTTAAACAAGCAAGACATAATCAATTAGAACTCATAACAGAAATATTAAATGCTTTTGAGTCAGATAAACGT
TATGTTATACTTGAAGCAGGAACAGGAACAGGAAAATCAGCTATTGCAGCAACCCTTGCTCAAATTCTACAACCAGCATA
TATTCTTACAATGACAAAACAATTACAAAGACAATATGCTGATGAATTTGGTTATGCTCAAGTTAAGGGAAGAAATAATT
TCTCATGTATGGATAGTGGTTCTTTAAATACATGTGATCAAGGAACATGTCAAACAAGTAGAACAACAGAGGAATTTGCT
TGTCCATATGGTATTAAAATAGAACAAAATAAACAGAAAAATATGGAAGATGATGATAATACCCAGTACTACAATACACC
ATTTTCATTTAAATCATCAGAACATTGTCCATATTGGAATCAGAAATCTATTGCAATAAATGAGCCTGTTACATTACTAA
ATTATGATTATGCATATCTTGAATTAAATTATGTGCAACATTTCCAAAAAAGAAATATAATGATACTTGATGAGGCCCAT
AATATTGAAGATAAGATAATGCATAAATTAGAACTTAATATTTCTGATAAACAGTTAAAAAAAGATATTAATCAGTCTAT
ACCAAGAGAAATGATGTCATTTACAGATATTAAAGATTGGATTGCATTTCTTGAATCCATATTTGATTCATATAATGATA
TATATACAAACAATCTTACTAAGAAAAAAGCAGATAGAATAGAACGTACAAAAAGAAAACTCAAAGAAATCACTGAAAAT
ATTAAGAAAAATCCTGAAAATTGGGTTGTTTCATTTGAAGGTGAGGTTGTTTCATTTAAACCACTTAAAGTGGATATGTA
TGCTGAGGATACATTGTTCCAGTATGCTGATAAGATATTATTTATGAGTGCAACTATACTTGATAAGGATTTGTTTTGTA
AATGGTTAGGTTTAAATTCAGATGATGTTTATTATATACACAGTGAAAGTCCATTTAAAAAAGAGTATAGGCCAATACAT
ATGAGACTAGTGGGGTCAATGGCTAAACGTGCTCTTTGGCATACAGCACCAAAAACAATACCTGTACTTCGAGATATAAT
GGATGAACATAAAAATGAGAAGGGTTTAATTCATACAAATAGTTATAAATGTCAAAAATATATAACAGACCATATTAAAG
ACCAAAGAATACTATCTCATTCACCTAAATCAAGGGATCAAATACTAGCAGAATTTGAAAGATCATCAAATCCTTATGTT
TTAGTAAGTCCTTCCATGAGTGAAGGAGTAGATTTACCATATGAGAAGTGTCAATTCCAAATTATATATAAGGTACCTTA
TCCATATCTTGGAGATAAACAGATAAATGAAAGAAAAAATATTGATCCACAATGGTATGCATATAAAACAATAATGACAT
TAATGCAGGCATATGGTAGGGGAATGAGAGCAGAAAATGATAGTTGTGATACATACATCTTAGATAAAAATATACAATCA
ATTCTTAGAAATAAGATGTATAGAAAACTAATACCGAAATTCTTTAGAGAAGCCATTACTAATAAATAG

Upstream 100 bases:

>100_bases
ATACTTCAGGTATCTGGTGTATTTATTTTATACTTGAATATCTTATGAATGATTTTTAAATCAACTAAATAATAAAGTAT
GAATAATAAATATAAAAACT

Downstream 100 bases:

>100_bases
AAAAAAGTTATTTAAAAAAAGAAAGGAAGTTATGGTAAAATTTCATCAATAACTTCTACTACTTCATCTAATTCTTCTTT
TGTAATTACAAGAGGTGGTA

Product: putative ATP-dependent helicase

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; Rad3-Related DNA Helicase; Helicase-Like Protein; Rad3-Related DNA Helicases DinG; Helicase Domain-Containing Protein; Type III Restriction Protein Res Subunit

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MNTIFCPDCGMIRNKCICSKKEKNQNSLISRPSTEEKESLQQQHPHIDDEIIENFPFKQARHNQLELITEILNAFESDKR
YVILEAGTGTGKSAIAATLAQILQPAYILTMTKQLQRQYADEFGYAQVKGRNNFSCMDSGSLNTCDQGTCQTSRTTEEFA
CPYGIKIEQNKQKNMEDDDNTQYYNTPFSFKSSEHCPYWNQKSIAINEPVTLLNYDYAYLELNYVQHFQKRNIMILDEAH
NIEDKIMHKLELNISDKQLKKDINQSIPREMMSFTDIKDWIAFLESIFDSYNDIYTNNLTKKKADRIERTKRKLKEITEN
IKKNPENWVVSFEGEVVSFKPLKVDMYAEDTLFQYADKILFMSATILDKDLFCKWLGLNSDDVYYIHSESPFKKEYRPIH
MRLVGSMAKRALWHTAPKTIPVLRDIMDEHKNEKGLIHTNSYKCQKYITDHIKDQRILSHSPKSRDQILAEFERSSNPYV
LVSPSMSEGVDLPYEKCQFQIIYKVPYPYLGDKQINERKNIDPQWYAYKTIMTLMQAYGRGMRAENDSCDTYILDKNIQS
ILRNKMYRKLIPKFFREAITNK

Sequences:

>Translated_582_residues
MNTIFCPDCGMIRNKCICSKKEKNQNSLISRPSTEEKESLQQQHPHIDDEIIENFPFKQARHNQLELITEILNAFESDKR
YVILEAGTGTGKSAIAATLAQILQPAYILTMTKQLQRQYADEFGYAQVKGRNNFSCMDSGSLNTCDQGTCQTSRTTEEFA
CPYGIKIEQNKQKNMEDDDNTQYYNTPFSFKSSEHCPYWNQKSIAINEPVTLLNYDYAYLELNYVQHFQKRNIMILDEAH
NIEDKIMHKLELNISDKQLKKDINQSIPREMMSFTDIKDWIAFLESIFDSYNDIYTNNLTKKKADRIERTKRKLKEITEN
IKKNPENWVVSFEGEVVSFKPLKVDMYAEDTLFQYADKILFMSATILDKDLFCKWLGLNSDDVYYIHSESPFKKEYRPIH
MRLVGSMAKRALWHTAPKTIPVLRDIMDEHKNEKGLIHTNSYKCQKYITDHIKDQRILSHSPKSRDQILAEFERSSNPYV
LVSPSMSEGVDLPYEKCQFQIIYKVPYPYLGDKQINERKNIDPQWYAYKTIMTLMQAYGRGMRAENDSCDTYILDKNIQS
ILRNKMYRKLIPKFFREAITNK
>Mature_582_residues
MNTIFCPDCGMIRNKCICSKKEKNQNSLISRPSTEEKESLQQQHPHIDDEIIENFPFKQARHNQLELITEILNAFESDKR
YVILEAGTGTGKSAIAATLAQILQPAYILTMTKQLQRQYADEFGYAQVKGRNNFSCMDSGSLNTCDQGTCQTSRTTEEFA
CPYGIKIEQNKQKNMEDDDNTQYYNTPFSFKSSEHCPYWNQKSIAINEPVTLLNYDYAYLELNYVQHFQKRNIMILDEAH
NIEDKIMHKLELNISDKQLKKDINQSIPREMMSFTDIKDWIAFLESIFDSYNDIYTNNLTKKKADRIERTKRKLKEITEN
IKKNPENWVVSFEGEVVSFKPLKVDMYAEDTLFQYADKILFMSATILDKDLFCKWLGLNSDDVYYIHSESPFKKEYRPIH
MRLVGSMAKRALWHTAPKTIPVLRDIMDEHKNEKGLIHTNSYKCQKYITDHIKDQRILSHSPKSRDQILAEFERSSNPYV
LVSPSMSEGVDLPYEKCQFQIIYKVPYPYLGDKQINERKNIDPQWYAYKTIMTLMQAYGRGMRAENDSCDTYILDKNIQS
ILRNKMYRKLIPKFFREAITNK

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68277; Mature: 68277

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS01164 COPPER_AMINE_OXID_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIFCPDCGMIRNKCICSKKEKNQNSLISRPSTEEKESLQQQHPHIDDEIIENFPFKQA
CCCEECCCCHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCHH
RHNQLELITEILNAFESDKRYVILEAGTGTGKSAIAATLAQILQPAYILTMTKQLQRQYA
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DEFGYAQVKGRNNFSCMDSGSLNTCDQGTCQTSRTTEEFACPYGIKIEQNKQKNMEDDDN
HHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCC
TQYYNTPFSFKSSEHCPYWNQKSIAINEPVTLLNYDYAYLELNYVQHFQKRNIMILDEAH
CEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCEEEEHHHHHHHHCCEEEEECCC
NIEDKIMHKLELNISDKQLKKDINQSIPREMMSFTDIKDWIAFLESIFDSYNDIYTNNLT
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KKKADRIERTKRKLKEITENIKKNPENWVVSFEGEVVSFKPLKVDMYAEDTLFQYADKIL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECEEEEEEHHHHHHHHHHHHH
FMSATILDKDLFCKWLGLNSDDVYYIHSESPFKKEYRPIHMRLVGSMAKRALWHTAPKTI
HHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCHH
PVLRDIMDEHKNEKGLIHTNSYKCQKYITDHIKDQRILSHSPKSRDQILAEFERSSNPYV
HHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE
LVSPSMSEGVDLPYEKCQFQIIYKVPYPYLGDKQINERKNIDPQWYAYKTIMTLMQAYGR
EECCCCCCCCCCCHHHCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCC
GMRAENDSCDTYILDKNIQSILRNKMYRKLIPKFFREAITNK
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTIFCPDCGMIRNKCICSKKEKNQNSLISRPSTEEKESLQQQHPHIDDEIIENFPFKQA
CCCEECCCCHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCHH
RHNQLELITEILNAFESDKRYVILEAGTGTGKSAIAATLAQILQPAYILTMTKQLQRQYA
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DEFGYAQVKGRNNFSCMDSGSLNTCDQGTCQTSRTTEEFACPYGIKIEQNKQKNMEDDDN
HHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCC
TQYYNTPFSFKSSEHCPYWNQKSIAINEPVTLLNYDYAYLELNYVQHFQKRNIMILDEAH
CEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCCEEEEHHHHHHHHCCEEEEECCC
NIEDKIMHKLELNISDKQLKKDINQSIPREMMSFTDIKDWIAFLESIFDSYNDIYTNNLT
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KKKADRIERTKRKLKEITENIKKNPENWVVSFEGEVVSFKPLKVDMYAEDTLFQYADKIL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECEEEEEEHHHHHHHHHHHHH
FMSATILDKDLFCKWLGLNSDDVYYIHSESPFKKEYRPIHMRLVGSMAKRALWHTAPKTI
HHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCHH
PVLRDIMDEHKNEKGLIHTNSYKCQKYITDHIKDQRILSHSPKSRDQILAEFERSSNPYV
HHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE
LVSPSMSEGVDLPYEKCQFQIIYKVPYPYLGDKQINERKNIDPQWYAYKTIMTLMQAYGR
EECCCCCCCCCCCHHHCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCC
GMRAENDSCDTYILDKNIQSILRNKMYRKLIPKFFREAITNK
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA