| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721485
Identifier: 83721485
GI number: 83721485
Start: 3059796
End: 3060635
Strand: Reverse
Name: 83721485
Synonym: BTH_I2678
Alternate gene names: NA
Gene position: 3060635-3059796 (Counterclockwise)
Preceding gene: 83720353
Following gene: 83720960
Centisome position: 80.35
GC content: 70.83
Gene sequence:
>840_bases ATGAAAGTTTCGAGACCGCCTGGCGCGCCGGCGCGCGCGGCACGGGTGCTGCGCCGCGTGTTGCTCGGCGCGGCGGCCGC GGCGTCGTTCGCCGCGCAGCACGCGCAAGCGGCGGCGTCCGTGATGATCTGGCCGATCGATCCCGTGATCGAGAGCGGCG AGCGGGCCGCGGCGCTTTGGCTCGAGAACCGCGATCGCCGGCCGGTGACGCTGCAGGTGCGCGTGCTCGGCTGGCGCGAG GCGAACGGCGAGGATGTCTACGACGAGAACCAGCAGCGCATCGCGGGCAGCCCGCCGATGGCGACGGTGCCCCCCGGCAA ACGCCAGTTGGTCCGGCTCACGCGGCTCGCGGATACCGCGCCCGGCAGCGAGGAGGCGTACCGCGTGCTGATCGACGAGA TCCCGCAGCCGGACGACGACGCGCAGCCGTCCGCGGGCGACACGGCGCTCGGCGTGAAGTTCCAGATGCATTATTCGGTG CCGCTTTTCGTGTACGGCGACGGCCTGTGGACGAAAGAGAATCCGGAGAAGCGCCGCGATCCGGTGGCGGCGGGGCGGCC GGCGCTCCGTTGGCGCGTCGCGCACGACGGCGGCAAGCGCTGGCTCGTCGTGTCCAACCGTGGCCCCGTGCATGCGCGGA TCACGCATGTGGTGTTCGAGGCGAACGGCGCACGCGCCGATTTCGCGCGCGGCCTGCTCGGCTACGTGTTGCCCGGCGCG CAGATGCGCTGGGCGCTGCCCGAGACCATCAAGCTCAATTCCAATTCCAAGCTGATCGCCACCGTCAACGGCGTGGCCGA TCTTGCAATCGACGTGGACGGCGCCGCTTCGAACCGGTAA
Upstream 100 bases:
>100_bases TCTACGGCGCGCTGACGCTGCCGGGCGGCGGCGCGCCCGCGGGCACGTATACCGACACCGCGCAGGTCACGCTCAGTTAT TAATCAATCAGGAATTCGTG
Downstream 100 bases:
>100_bases TCCGCATCACGACACAAGCGACGATGTCGCGACGGGGAAATGCCTTGAAGCGGTACAACGAATACAGAACGAGAGGGCTG CCGCGACGGCGCGCGGCGGC
Product: fimbrial assembly chaperone
Products: NA
Alternate protein names: Type 1 Pili Usher Pathway Chaperone CsuC; Fimbrial Chaperone; P Pilus Assembly Protein Chaperone PapD-Like Protein; CsuC Protein; Pili Assembly Chaperone Transmembrane Protein; P Pilus Assembly Protein Chaperone PapD-Like; Chaperone Protein; Chaperone Protein EcpD; Fimbrial Chaperone Protein; Exported Fimbriae-Related Chaperone; Pilus Assembly Protein; CsuC Protein Fimbrial Chaperone Proteins; Putataive Fimbrial Chaperone Protein; Type I Pili; Fimbrial Assembly Chaperone; Pili Assembly Chaperone Transmembrane Protein Papd-Like; Fimbriae-Assembly Chaperone; Pilus Assembly Protein Chaperone PapD; Type 1 Pilus Chaperone FimC; Fimbriae Chaperone; Chaperone Protein MrkB; Type 1 Pili Usher Pathway Chaperone; Type I Pilus Usher Pathway Chaperone CsuC; P Pilus Assembly Protein Chaperone PapD; Pili Assembly Chaperone Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKVSRPPGAPARAARVLRRVLLGAAAAASFAAQHAQAAASVMIWPIDPVIESGERAAALWLENRDRRPVTLQVRVLGWRE ANGEDVYDENQQRIAGSPPMATVPPGKRQLVRLTRLADTAPGSEEAYRVLIDEIPQPDDDAQPSAGDTALGVKFQMHYSV PLFVYGDGLWTKENPEKRRDPVAAGRPALRWRVAHDGGKRWLVVSNRGPVHARITHVVFEANGARADFARGLLGYVLPGA QMRWALPETIKLNSNSKLIATVNGVADLAIDVDGAASNR
Sequences:
>Translated_279_residues MKVSRPPGAPARAARVLRRVLLGAAAAASFAAQHAQAAASVMIWPIDPVIESGERAAALWLENRDRRPVTLQVRVLGWRE ANGEDVYDENQQRIAGSPPMATVPPGKRQLVRLTRLADTAPGSEEAYRVLIDEIPQPDDDAQPSAGDTALGVKFQMHYSV PLFVYGDGLWTKENPEKRRDPVAAGRPALRWRVAHDGGKRWLVVSNRGPVHARITHVVFEANGARADFARGLLGYVLPGA QMRWALPETIKLNSNSKLIATVNGVADLAIDVDGAASNR >Mature_279_residues MKVSRPPGAPARAARVLRRVLLGAAAAASFAAQHAQAAASVMIWPIDPVIESGERAAALWLENRDRRPVTLQVRVLGWRE ANGEDVYDENQQRIAGSPPMATVPPGKRQLVRLTRLADTAPGSEEAYRVLIDEIPQPDDDAQPSAGDTALGVKFQMHYSV PLFVYGDGLWTKENPEKRRDPVAAGRPALRWRVAHDGGKRWLVVSNRGPVHARITHVVFEANGARADFARGLLGYVLPGA QMRWALPETIKLNSNSKLIATVNGVADLAIDVDGAASNR
Specific function: Unknown
COG id: COG3121
COG function: function code NU; P pilus assembly protein, chaperone PapD
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30289; Mature: 30289
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSRPPGAPARAARVLRRVLLGAAAAASFAAQHAQAAASVMIWPIDPVIESGERAAALW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHCCCCEEEEE LENRDRRPVTLQVRVLGWREANGEDVYDENQQRIAGSPPMATVPPGKRQLVRLTRLADTA ECCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHCCC PGSEEAYRVLIDEIPQPDDDAQPSAGDTALGVKFQMHYSVPLFVYGDGLWTKENPEKRRD CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCHHHCC PVAAGRPALRWRVAHDGGKRWLVVSNRGPVHARITHVVFEANGARADFARGLLGYVLPGA CCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCC QMRWALPETIKLNSNSKLIATVNGVADLAIDVDGAASNR CEEECCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCC >Mature Secondary Structure MKVSRPPGAPARAARVLRRVLLGAAAAASFAAQHAQAAASVMIWPIDPVIESGERAAALW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHCCCCEEEEE LENRDRRPVTLQVRVLGWREANGEDVYDENQQRIAGSPPMATVPPGKRQLVRLTRLADTA ECCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHCCC PGSEEAYRVLIDEIPQPDDDAQPSAGDTALGVKFQMHYSVPLFVYGDGLWTKENPEKRRD CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCHHHCC PVAAGRPALRWRVAHDGGKRWLVVSNRGPVHARITHVVFEANGARADFARGLLGYVLPGA CCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCC QMRWALPETIKLNSNSKLIATVNGVADLAIDVDGAASNR CEEECCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA