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The map label for this gene is hifC [H]

Identifier: 83720960

GI number: 83720960

Start: 3057340

End: 3059640

Strand: Reverse

Name: hifC [H]

Synonym: BTH_I2677

Alternate gene names: 83720960

Gene position: 3059640-3057340 (Counterclockwise)

Preceding gene: 83721485

Following gene: 83721014

Centisome position: 80.32

GC content: 70.32

Gene sequence:

>2301_bases
ATGACGCTCGCGGACAGCTTCGGCCGCGCGCCGCCGCCCGGGGGGGGCGCGGCGGCGCACGGCACGCTGTATCTCGAACT
GGTCGTCAACGCGCTGTCGACGGGGCGCATCGTGCCGATCCGCTATCGGGACGGCGTCTACTACGCGCGCGCGGGCGACC
TCGCGCAGGCGTCGGTGCGCACGGGCGCGGAGCCCGACGCGCTCGTCGATCTGTCGAAGCTCGACGGCGTGCAAGTCGAA
TACGAGAGCGGCGAGCAGCGCCTGAAGCTGAGCGTGCCGCCCGACTGGCTGCCGCAGCAGACGGTCGGCTCGCGGCGGCT
GTACGACCGCACGCCCGCCGCCGTGAGCTTCGGGCTCCTGTTCAATTACGACGTGTACACGAACTCGCCGACGCTCGGCA
CGAGCTACACGTCCGCTTGGACCGAACAGCGGCTCTTCGACAAGTGGGGCGCCGTGACGAACACGGGCGTCTACCGGCGC
GATTATGGCGGCGGCGTCGGCGGTGCCGGGAGCAACCGCTATCTGCGCTACGACACGTCCTGGCGCTACTCGGACCAGGA
CCGGATGCTCACGTACACCGCGGGCGACGTGATCACGGGCGCGTTGCCGTGGTCGAGCGCGGTGCGCCTGGGCGGCGTGT
CGGTGGAGCGCGACTTCAAGGTGCGCCCCGACATCGTTACGTATCCGCTGCCGCAGTTCTCGGGCCAGGCGGCGGTGCCG
ACCGCCGTCGATCTCTTCATCAACGGCAGCAAGACGACGACGGGGCAGGTGAACCCCGGCCCGTTCACGATGAACAACGT
GCCGTTCATCAACGGCGCTGGCGAGGCGTCCGTCGTCACGACCGACGCGCTCGGCCGTCAGGTCGCGACGACGATTCCGT
TCTACGTCGCGAACACGCTGCTGCAGAAGGGGCTCTCCGACTATTCGCTGTCGGCCGGCGCGATGCGGCGCGATTACGGA
ATCCGCTCGTTCTCGTACGGCAAGTTCGCGGCGTCGGGCACCGCGCGCTACGGCCTCGCCGACTGGCTGACGATCGAGGG
CCACGCGGAAGGCGGCGAGCGCCTCGCGCTCGGCGGCCTCGGGTTCGATGTCGGCGTCGGCATGTTCGGCGTGCTCAACG
TCGCGGCGACGCAGAGCAGCCTCGCCGGCACATCGGGCCGGCAATACGCATTCGGCTACGGCTATTCGTCGCAGCGGTTC
AGCGTGTCGCTGCAGCGAATCCAGCGCACGGCAGGGTTTCGCGATCTGTCGGTCTACGATCTGCCGGCGGACGTCACGTA
CCGGCTCGTGCGCAGCAGCACGCAGGCGACGGGCGCGCTCAATCTCGGCGCGATCGGCGGCACGCTCGGCGCCGGCTATT
TCGACGTGCGCGGCGCGGACGGCACGCGCACGCGGATCGCGAACCTGTCGTACACGCGGCCGCTGTTCCGGCGCGCGACG
CTCTACGCGTCGGTCAACAAGACGATCGGCGACCACGGCGTCGCCGCGCAATTGCAACTGATCGTGCCGCTCGGCGACAA
GGGCGTCGTGACGGGCTCGGTCGCGCGCGACGAGCGCAACAGTTTCAGCGAGCGCGTGCAGTACAGCCGCAGCGTGCCGA
GCGACGGCGGCTTCGGCTGGAATCTCGCGTATGCGGGCGGCGGCGCGCACTATCAGCAGGCGGACGCGACGTGGCGCAAC
CGCTATGTCCAGGTGCAGGGCGGCGCGTACGGCTACGGCGCGGGGCGCGGCTACGCGCGCTGGGGCGAGGTGCAGGGCTC
GGTCGTCGTGATGGACGGCGCGGTGCTGCCCGCCAATCGCGTCGACGACGCGTTCGTGCTGATCGACACGCAAGGCCGCG
AAGGCGTGCCGGTGCGCTACGAGAACCAGCTCGTCGGCAAGACCGACGGCGGCGGCCATCTGCTCGTGCCGTGGGCGCCG
TCCTATTACGCGGGCAAGTACGAGATCGATCCGCTCGATCTGCCGAGCAACGTGCGCGTGCCGATCGTCGAGCGTCGCGT
CGCGGTGCGCGACCACCGCGGCGCGCTCGTCACGTTCCCGATCCAGAAGATCGTCTCCGCGCAGATCGCGCTGGTCGACG
CGTCGGGCCGGCCGATCGGCATCGGCTCGCGCGTGCTGCACGAGGAGAGCGGCCAGGCCGCGCTCGTCGGCTGGCAGGGC
GAGACGTATCTCGAAGGCTTGTCCGCCGTCAATCACCTGCGCGTCACGACGCCGGACGGCCGCATCTGCCACGCGACGTT
CGCCGCGGACGTCGACGCGGCGCAGATGAGCCGCATCGGCCCGCTCGCGTGCGGCGAATAA

Upstream 100 bases:

>100_bases
CAACGAATACAGAACGAGAGGGCTGCCGCGACGGCGCGCGGCGGCGTGGACGGTGGGCATCGCGTTCGCGGCGGCGGGGG
ACGCGCGCGCGAACGAGCCG

Downstream 100 bases:

>100_bases
CGACAGGATCCAACGATGAAGCCATTCCGATCATTCTTCGTGCGCACCGCGGCGACGCTCGCGCTCGGTCTCTTTGCCGC
GCTGCACGCGCACGCGTCGT

Product: fimbrial usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 766; Mature: 765

Protein sequence:

>766_residues
MTLADSFGRAPPPGGGAAAHGTLYLELVVNALSTGRIVPIRYRDGVYYARAGDLAQASVRTGAEPDALVDLSKLDGVQVE
YESGEQRLKLSVPPDWLPQQTVGSRRLYDRTPAAVSFGLLFNYDVYTNSPTLGTSYTSAWTEQRLFDKWGAVTNTGVYRR
DYGGGVGGAGSNRYLRYDTSWRYSDQDRMLTYTAGDVITGALPWSSAVRLGGVSVERDFKVRPDIVTYPLPQFSGQAAVP
TAVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEASVVTTDALGRQVATTIPFYVANTLLQKGLSDYSLSAGAMRRDYG
IRSFSYGKFAASGTARYGLADWLTIEGHAEGGERLALGGLGFDVGVGMFGVLNVAATQSSLAGTSGRQYAFGYGYSSQRF
SVSLQRIQRTAGFRDLSVYDLPADVTYRLVRSSTQATGALNLGAIGGTLGAGYFDVRGADGTRTRIANLSYTRPLFRRAT
LYASVNKTIGDHGVAAQLQLIVPLGDKGVVTGSVARDERNSFSERVQYSRSVPSDGGFGWNLAYAGGGAHYQQADATWRN
RYVQVQGGAYGYGAGRGYARWGEVQGSVVVMDGAVLPANRVDDAFVLIDTQGREGVPVRYENQLVGKTDGGGHLLVPWAP
SYYAGKYEIDPLDLPSNVRVPIVERRVAVRDHRGALVTFPIQKIVSAQIALVDASGRPIGIGSRVLHEESGQAALVGWQG
ETYLEGLSAVNHLRVTTPDGRICHATFAADVDAAQMSRIGPLACGE

Sequences:

>Translated_766_residues
MTLADSFGRAPPPGGGAAAHGTLYLELVVNALSTGRIVPIRYRDGVYYARAGDLAQASVRTGAEPDALVDLSKLDGVQVE
YESGEQRLKLSVPPDWLPQQTVGSRRLYDRTPAAVSFGLLFNYDVYTNSPTLGTSYTSAWTEQRLFDKWGAVTNTGVYRR
DYGGGVGGAGSNRYLRYDTSWRYSDQDRMLTYTAGDVITGALPWSSAVRLGGVSVERDFKVRPDIVTYPLPQFSGQAAVP
TAVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEASVVTTDALGRQVATTIPFYVANTLLQKGLSDYSLSAGAMRRDYG
IRSFSYGKFAASGTARYGLADWLTIEGHAEGGERLALGGLGFDVGVGMFGVLNVAATQSSLAGTSGRQYAFGYGYSSQRF
SVSLQRIQRTAGFRDLSVYDLPADVTYRLVRSSTQATGALNLGAIGGTLGAGYFDVRGADGTRTRIANLSYTRPLFRRAT
LYASVNKTIGDHGVAAQLQLIVPLGDKGVVTGSVARDERNSFSERVQYSRSVPSDGGFGWNLAYAGGGAHYQQADATWRN
RYVQVQGGAYGYGAGRGYARWGEVQGSVVVMDGAVLPANRVDDAFVLIDTQGREGVPVRYENQLVGKTDGGGHLLVPWAP
SYYAGKYEIDPLDLPSNVRVPIVERRVAVRDHRGALVTFPIQKIVSAQIALVDASGRPIGIGSRVLHEESGQAALVGWQG
ETYLEGLSAVNHLRVTTPDGRICHATFAADVDAAQMSRIGPLACGE
>Mature_765_residues
TLADSFGRAPPPGGGAAAHGTLYLELVVNALSTGRIVPIRYRDGVYYARAGDLAQASVRTGAEPDALVDLSKLDGVQVEY
ESGEQRLKLSVPPDWLPQQTVGSRRLYDRTPAAVSFGLLFNYDVYTNSPTLGTSYTSAWTEQRLFDKWGAVTNTGVYRRD
YGGGVGGAGSNRYLRYDTSWRYSDQDRMLTYTAGDVITGALPWSSAVRLGGVSVERDFKVRPDIVTYPLPQFSGQAAVPT
AVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEASVVTTDALGRQVATTIPFYVANTLLQKGLSDYSLSAGAMRRDYGI
RSFSYGKFAASGTARYGLADWLTIEGHAEGGERLALGGLGFDVGVGMFGVLNVAATQSSLAGTSGRQYAFGYGYSSQRFS
VSLQRIQRTAGFRDLSVYDLPADVTYRLVRSSTQATGALNLGAIGGTLGAGYFDVRGADGTRTRIANLSYTRPLFRRATL
YASVNKTIGDHGVAAQLQLIVPLGDKGVVTGSVARDERNSFSERVQYSRSVPSDGGFGWNLAYAGGGAHYQQADATWRNR
YVQVQGGAYGYGAGRGYARWGEVQGSVVVMDGAVLPANRVDDAFVLIDTQGREGVPVRYENQLVGKTDGGGHLLVPWAPS
YYAGKYEIDPLDLPSNVRVPIVERRVAVRDHRGALVTFPIQKIVSAQIALVDASGRPIGIGSRVLHEESGQAALVGWQGE
TYLEGLSAVNHLRVTTPDGRICHATFAADVDAAQMSRIGPLACGE

Specific function: Essential for piliation [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1790772, Length=767, Percent_Identity=24.1199478487614, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1786744, Length=592, Percent_Identity=25.5067567567568, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1789533, Length=570, Percent_Identity=22.8070175438596, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788427, Length=616, Percent_Identity=22.5649350649351, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 81949; Mature: 81817

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLADSFGRAPPPGGGAAAHGTLYLELVVNALSTGRIVPIRYRDGVYYARAGDLAQASVR
CCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCEEEEEEECCEEEEECCCCHHHHHH
TGAEPDALVDLSKLDGVQVEYESGEQRLKLSVPPDWLPQQTVGSRRLYDRTPAAVSFGLL
CCCCCHHEEEHHHCCCEEEEECCCCEEEEEECCCCCCCCHHCCCCHHCCCCCCCEEEEEE
FNYDVYTNSPTLGTSYTSAWTEQRLFDKWGAVTNTGVYRRDYGGGVGGAGSNRYLRYDTS
EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECCC
WRYSDQDRMLTYTAGDVITGALPWSSAVRLGGVSVERDFKVRPDIVTYPLPQFSGQAAVP
CCCCCCCCEEEEECCCEEEECCCCCCCEEECCEEEECCCCCCCCEEEECCCCCCCCCCCC
TAVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEASVVTTDALGRQVATTIPFYVANTL
EEEEEEECCCCCCCCCCCCCCEEECCCCEECCCCCCEEEEHHHHCCHHHHHHHHHHHHHH
LQKGLSDYSLSAGAMRRDYGIRSFSYGKFAASGTARYGLADWLTIEGHAEGGERLALGGL
HHCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCEEEEECC
GFDVGVGMFGVLNVAATQSSLAGTSGRQYAFGYGYSSQRFSVSLQRIQRTAGFRDLSVYD
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEE
LPADVTYRLVRSSTQATGALNLGAIGGTLGAGYFDVRGADGTRTRIANLSYTRPLFRRAT
CCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHH
LYASVNKTIGDHGVAAQLQLIVPLGDKGVVTGSVARDERNSFSERVQYSRSVPSDGGFGW
EEEECCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEE
NLAYAGGGAHYQQADATWRNRYVQVQGGAYGYGAGRGYARWGEVQGSVVVMDGAVLPANR
EEEEECCCCCCCCCCCCHHCCEEEECCCEEECCCCCCCCCCCCCCCCEEEEECEECCCCC
VDDAFVLIDTQGREGVPVRYENQLVGKTDGGGHLLVPWAPSYYAGKYEIDPLDLPSNVRV
CCCEEEEEECCCCCCCCEEECCEEEECCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCC
PIVERRVAVRDHRGALVTFPIQKIVSAQIALVDASGRPIGIGSRVLHEESGQAALVGWQG
CHHHHEEEEECCCCCEEEECHHHHCCEEEEEEECCCCEECCCHHHEECCCCCEEEEECCC
ETYLEGLSAVNHLRVTTPDGRICHATFAADVDAAQMSRIGPLACGE
CHHHHHHHHHCEEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
TLADSFGRAPPPGGGAAAHGTLYLELVVNALSTGRIVPIRYRDGVYYARAGDLAQASVR
CCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCCEEEEEEECCEEEEECCCCHHHHHH
TGAEPDALVDLSKLDGVQVEYESGEQRLKLSVPPDWLPQQTVGSRRLYDRTPAAVSFGLL
CCCCCHHEEEHHHCCCEEEEECCCCEEEEEECCCCCCCCHHCCCCHHCCCCCCCEEEEEE
FNYDVYTNSPTLGTSYTSAWTEQRLFDKWGAVTNTGVYRRDYGGGVGGAGSNRYLRYDTS
EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECCC
WRYSDQDRMLTYTAGDVITGALPWSSAVRLGGVSVERDFKVRPDIVTYPLPQFSGQAAVP
CCCCCCCCEEEEECCCEEEECCCCCCCEEECCEEEECCCCCCCCEEEECCCCCCCCCCCC
TAVDLFINGSKTTTGQVNPGPFTMNNVPFINGAGEASVVTTDALGRQVATTIPFYVANTL
EEEEEEECCCCCCCCCCCCCCEEECCCCEECCCCCCEEEEHHHHCCHHHHHHHHHHHHHH
LQKGLSDYSLSAGAMRRDYGIRSFSYGKFAASGTARYGLADWLTIEGHAEGGERLALGGL
HHCCCCCCCCCCCCHHHCCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCEEEEECC
GFDVGVGMFGVLNVAATQSSLAGTSGRQYAFGYGYSSQRFSVSLQRIQRTAGFRDLSVYD
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEE
LPADVTYRLVRSSTQATGALNLGAIGGTLGAGYFDVRGADGTRTRIANLSYTRPLFRRAT
CCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHH
LYASVNKTIGDHGVAAQLQLIVPLGDKGVVTGSVARDERNSFSERVQYSRSVPSDGGFGW
EEEECCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEE
NLAYAGGGAHYQQADATWRNRYVQVQGGAYGYGAGRGYARWGEVQGSVVVMDGAVLPANR
EEEEECCCCCCCCCCCCHHCCEEEECCCEEECCCCCCCCCCCCCCCCEEEEECEECCCCC
VDDAFVLIDTQGREGVPVRYENQLVGKTDGGGHLLVPWAPSYYAGKYEIDPLDLPSNVRV
CCCEEEEEECCCCCCCCEEECCEEEECCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCC
PIVERRVAVRDHRGALVTFPIQKIVSAQIALVDASGRPIGIGSRVLHEESGQAALVGWQG
CHHHHEEEEECCCCCEEEECHHHHCCEEEEEEECCCCEECCCHHHEECCCCCEEEEECCC
ETYLEGLSAVNHLRVTTPDGRICHATFAADVDAAQMSRIGPLACGE
CHHHHHHHHHCEEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7905461 [H]