| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83721444
Identifier: 83721444
GI number: 83721444
Start: 2814986
End: 2816023
Strand: Reverse
Name: 83721444
Synonym: BTH_I2460
Alternate gene names: NA
Gene position: 2816023-2814986 (Counterclockwise)
Preceding gene: 83720542
Following gene: 83719085
Centisome position: 73.93
GC content: 75.82
Gene sequence:
>1038_bases ATGTCCCATTTTCTCAAGCTCGCCGGTCTGATGCTCGTCGCGGTGGTCGGCGCGTTCCTGTTTCGCGCGCTGTACGTCGC GGCGTCGCAGCCGCGCCCGGCCGCGCCGCCGCAGCAGGTGCGCGTGCGCGTCGCGGCCGCCGATCTGCCGGCGGGCCTGC TGCTGCGCGACGTCGATCTCGGCTGGAAGACGATGGCGCGCGGCGACGTGCCAGCCGGCGCATTGATCGAAGGCGATGCG CGCGGCGACGGCCGGACTGCCGGCGCGGCGGTCGATGCGAGTGCAGCCGCAGCCGGCGATCTGAAGGGCGACTTGCTGCG CCATCCGGTGCGCGAGGGCATGCCGCTCGGCCCGGCCGACGTGATCTTGCCGAGCGCGCCCGGCTTTCTCGCGGCCGCGC TCAAGCCCGGCATGCGTGCGATCTCGGTCGCGATCGACGACGTATCCGGCAATGCCGGCCTGATTGAACCGGGCGATTAC GTTGACGTGCTGCTCACGCAGCAGCTCGCCGCGCCGGGCGGCGCGCCGGCCGACCCGGAGCGCGCGGTCGAATCGGAGAC GATCGCCGCGCGCGTGCGCGTGCTCGCGGTCGGCTCCGCGTTCCAGCGGCCGAAGGACGACGCCGCGCAGCCGAACACGC GCGCGCGCACTGTGACGTTCGAAGTGAGTTCGCACGACGCGCAGGTGATCACGGTCGGCGCGCATCTGGGCGCGCTGTCG CTCGCGCTGCGCAGCTTCGCGACGAGCGATCGCGGCGCGGTCGGCTTGGCGTCGGCGGAGCCGCCCGCGCCGCCCGTGTG GGCGGGCGACGTGTCGCGCGCGCTGCGCGCCGAGGCGCCGGCCGCGACGTCGGCGCAGCCGCGTCGCGTCGGCGCGCGCG CGGGAGGCGAGCGGCACGTGATTGTCTATCGCGGCTCGAAACAGGATGACGGGGCGGGCGCCGGCGCGCCGCTGCCGGGC GGCGTGCCGCCGATTCCGACGCTGCCGCCGCTGCCGGGAACGGCGGCGGCGCCCGCCGGCGCGCGGCCGGCGGCGTGA
Upstream 100 bases:
>100_bases CGTTCCGTACGGGGTCGCGCTCGCGGCGGGCGGCGTTCTCGCCGTGTGGGCGCCGGCCGCTTGCCGGCTGCCCGCATGTC TCGGATGACAGGCGGCCGAC
Downstream 100 bases:
>100_bases ACGATGTCGATCGATCTGGAGGACGAGTCGAAATGTGGAGCGTGATCGGCGGGATCGGCGTGCGGCAATCGGCGTCGGTT CGGGCATTGGCTTTTGCTGC
Product: CpaB family Flp pilus assembly protein
Products: NA
Alternate protein names: Flp Pilus Assembly CpaB; Pilus Assembly Protein CpaB; Pilus Assembly Protein; SAF Domain-Containing Protein; CpaB Pilus Assembly Protein; CtpC Protein; Fimbriae-Assembly Related Protein
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSHFLKLAGLMLVAVVGAFLFRALYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDVDLGWKTMARGDVPAGALIEGDA RGDGRTAGAAVDASAAAAGDLKGDLLRHPVREGMPLGPADVILPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIEPGDY VDVLLTQQLAAPGGAPADPERAVESETIAARVRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSHDAQVITVGAHLGALS LALRSFATSDRGAVGLASAEPPAPPVWAGDVSRALRAEAPAATSAQPRRVGARAGGERHVIVYRGSKQDDGAGAGAPLPG GVPPIPTLPPLPGTAAAPAGARPAA
Sequences:
>Translated_345_residues MSHFLKLAGLMLVAVVGAFLFRALYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDVDLGWKTMARGDVPAGALIEGDA RGDGRTAGAAVDASAAAAGDLKGDLLRHPVREGMPLGPADVILPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIEPGDY VDVLLTQQLAAPGGAPADPERAVESETIAARVRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSHDAQVITVGAHLGALS LALRSFATSDRGAVGLASAEPPAPPVWAGDVSRALRAEAPAATSAQPRRVGARAGGERHVIVYRGSKQDDGAGAGAPLPG GVPPIPTLPPLPGTAAAPAGARPAA >Mature_344_residues SHFLKLAGLMLVAVVGAFLFRALYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDVDLGWKTMARGDVPAGALIEGDAR GDGRTAGAAVDASAAAAGDLKGDLLRHPVREGMPLGPADVILPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIEPGDYV DVLLTQQLAAPGGAPADPERAVESETIAARVRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSHDAQVITVGAHLGALSL ALRSFATSDRGAVGLASAEPPAPPVWAGDVSRALRAEAPAATSAQPRRVGARAGGERHVIVYRGSKQDDGAGAGAPLPGG VPPIPTLPPLPGTAAAPAGARPAA
Specific function: Unknown
COG id: COG3745
COG function: function code U; Flp pilus assembly protein CpaB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34678; Mature: 34547
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFLKLAGLMLVAVVGAFLFRALYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDVDL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCEEEEECCC GWKTMARGDVPAGALIEGDARGDGRTAGAAVDASAAAAGDLKGDLLRHPVREGMPLGPAD CHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHH VILPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIEPGDYVDVLLTQQLAAPGGAPADPE EEECCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH RAVESETIAARVRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSHDAQVITVGAHLGALS HHHHHHHHHHHHEEEEECHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHH LALRSFATSDRGAVGLASAEPPAPPVWAGDVSRALRAEAPAATSAQPRRVGARAGGERHV HHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEE IVYRGSKQDDGAGAGAPLPGGVPPIPTLPPLPGTAAAPAGARPAA EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SHFLKLAGLMLVAVVGAFLFRALYVAASQPRPAAPPQQVRVRVAAADLPAGLLLRDVDL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCCCEEEEECCC GWKTMARGDVPAGALIEGDARGDGRTAGAAVDASAAAAGDLKGDLLRHPVREGMPLGPAD CHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCHH VILPSAPGFLAAALKPGMRAISVAIDDVSGNAGLIEPGDYVDVLLTQQLAAPGGAPADPE EEECCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH RAVESETIAARVRVLAVGSAFQRPKDDAAQPNTRARTVTFEVSSHDAQVITVGAHLGALS HHHHHHHHHHHHEEEEECHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHH LALRSFATSDRGAVGLASAEPPAPPVWAGDVSRALRAEAPAATSAQPRRVGARAGGERHV HHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEE IVYRGSKQDDGAGAGAPLPGGVPPIPTLPPLPGTAAAPAGARPAA EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA