| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is argS [H]
Identifier: 83721308
GI number: 83721308
Start: 394259
End: 396043
Strand: Reverse
Name: argS [H]
Synonym: BTH_I0355
Alternate gene names: 83721308
Gene position: 396043-394259 (Counterclockwise)
Preceding gene: 83719356
Following gene: 83718818
Centisome position: 10.4
GC content: 68.24
Gene sequence:
>1785_bases ATGCTGCCTGCTCAAAAACATACTCTCGAAACCCTGCTCGAAAACAGCGTGAAGCAGGTCGTCCAGGCGTCGAAAGGCGA CGCCGACGCCGCGTTCGTCCTCCCCGCGATCGCGCTCGAGCGCCCGAAGGTCGCCGCGCACGGCGACGTCGCGTGCAACG TCGCGCTGCAGCTCGCGAAGCCGCTTGGCGCGAATCCGCGCCAGCTCGCCGAGCGGATCGTCGCCGCGCTCACCGCGCAG CCCGCGGCGGCGGGCCTCGTCGACGCGGCCGAGATCGCCGGCCCCGGCTTCATCAACCTGCGCCTCACGCCCGCGTCGAA GCAGGCGGTGATCGGCGCGGTGTTCGCGCAAGGCCGCGCGTTCGGCGCGTCCGAGCGCGAACACGGCAAGCGCGTGCTGC TCGAATTCGTGTCCGCGAACCCGACGGGCCCGCTGCACGTCGGCCACGGCCGGCAGGCCGCGCTCGGCGACGCGCTCGCG AACGTGCTCGCGAGCCAGGGCTACGCGGTGCACCGCGAGTTCTACTACAACGACGCGGGCGTGCAGATCGGCAATCTCGC GATCTCGACGCAGGCGCGCGCGCGCGGCCTCAAGCCCGGCGACGCCGGCTGGCCGGAGGCCGCATACAACGGCGAGTACA TCGCCGACATCGCGCGCGACTACCTGAACGGCGAGACGGTCGCGGCGAGCGACGGCGAGCCGGTGACGGGCAAGCGCGAC GCCGATGATCTCGAGGCGATCCGCAAGTTCGCGGTCGCGTACCTGCGCCGCGAACAGGACATGGACCTGAAGGCGTTCGG CGTGAAGTTCGACCAGTACTATCTGGAATCGTCGCTCTACACGGAAGGCCGCGTCGAGAAAACGGTCGACGCGCTGATCG CGGCCGGCATGACCTACGAGCAGGAAGGCGCGCTGTGGCTGCGCACGACCGACGAGGGCGACGACAAGGATCGTGTGATG CGCAAGACGGACGGCACGTACACGTACTTCGTGCCGGACGTCGCGTACCACGTGACGAAGTGGGAGCGCGGCTTCACGAA GGTCATCAACATCCAGGGCTCGGACCACCACGGCACGATCGCGCGCGTGCGCGCGGGCCTGCAGGGGCTGCACATCGGAA TTCCGAAGGGCTACCCCGACTACGTGCTGCACAAGATGGTCACGGTGATGCGCGACGGCCAGGAAGTGAAGATCTCGAAG CGCGCGGGCAGCTACGTGACGGTGCGCGACCTGATCGAATGGTCCGGCGGCGCGACGCCGGGCTCGGAAGTCTCGCCCGA GCTGCTCGACGAGGCGACCATCACGCGCGGGCGCGACGCGGTGCGCTTCTTCCTGATTTCCCGCAAGGCGGACACCGAGT TCGTGTTCGACATCGATCTCGCGCTGAAACAGAACGACGAGAACCCGGTCTACTACGTGCAGTACGCGCACGCGCGGATC TGCTCGGTGCTCAACGAATGGAAATCGCGCTACGGCGCGACCGACGCGCTGTTGCCGGGCGCCGACCTGTCGCCGCTCGA CAGCAAGCAGGCGATGGCGCTGATGCAGAAGCTCGCCGAGTATCCGGACGTGCTCGCGCACGCGGCGAACGAACTCGCGC CGCACGCGGTCGCGTTCTACCTGCGCGAGCTCGCGAGCGAGTTTCACTCGTTCTACAATGCGGAGCGCGTTCTCGTCGAC GAAGAAGCGCCGCGCACCGCGCGCATCGCGCTACTCGCGGCGACACGCCAGGTGCTCGAAAACGGTCTCGCGATGCTCGG CGTGTCCGCGCCCAGCAAGATGTAA
Upstream 100 bases:
>100_bases ATTAGCACCTGTTAAAATTCAGCGATCCCTGAAACGCGCGCCCTGCGGCGCGACGGCGCCCCGGCCACGCGGGCCGCCGC CAACGATATCCTCGACCAGC
Downstream 100 bases:
>100_bases CGCCGGGACCGTCGGCCAAGCGCCGCGGCGCAGCGCAGCGCGCCGCGGCTGTTTCACGAAATCTTTCGCAGGTGACTCAA GCAATGGCAAAACCACGCCG
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MLPAQKHTLETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAERIVAALTAQ PAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAQGRAFGASEREHGKRVLLEFVSANPTGPLHVGHGRQAALGDALA NVLASQGYAVHREFYYNDAGVQIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRD ADDLEAIRKFAVAYLRREQDMDLKAFGVKFDQYYLESSLYTEGRVEKTVDALIAAGMTYEQEGALWLRTTDEGDDKDRVM RKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISK RAGSYVTVRDLIEWSGGATPGSEVSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARI CSVLNEWKSRYGATDALLPGADLSPLDSKQAMALMQKLAEYPDVLAHAANELAPHAVAFYLRELASEFHSFYNAERVLVD EEAPRTARIALLAATRQVLENGLAMLGVSAPSKM
Sequences:
>Translated_594_residues MLPAQKHTLETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAERIVAALTAQ PAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAQGRAFGASEREHGKRVLLEFVSANPTGPLHVGHGRQAALGDALA NVLASQGYAVHREFYYNDAGVQIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRD ADDLEAIRKFAVAYLRREQDMDLKAFGVKFDQYYLESSLYTEGRVEKTVDALIAAGMTYEQEGALWLRTTDEGDDKDRVM RKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISK RAGSYVTVRDLIEWSGGATPGSEVSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARI CSVLNEWKSRYGATDALLPGADLSPLDSKQAMALMQKLAEYPDVLAHAANELAPHAVAFYLRELASEFHSFYNAERVLVD EEAPRTARIALLAATRQVLENGLAMLGVSAPSKM >Mature_594_residues MLPAQKHTLETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAERIVAALTAQ PAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAQGRAFGASEREHGKRVLLEFVSANPTGPLHVGHGRQAALGDALA NVLASQGYAVHREFYYNDAGVQIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRD ADDLEAIRKFAVAYLRREQDMDLKAFGVKFDQYYLESSLYTEGRVEKTVDALIAAGMTYEQEGALWLRTTDEGDDKDRVM RKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISK RAGSYVTVRDLIEWSGGATPGSEVSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARI CSVLNEWKSRYGATDALLPGADLSPLDSKQAMALMQKLAEYPDVLAHAANELAPHAVAFYLRELASEFHSFYNAERVLVD EEAPRTARIALLAATRQVLENGLAMLGVSAPSKM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI15149476, Length=596, Percent_Identity=22.6510067114094, Blast_Score=92, Evalue=2e-18, Organism=Escherichia coli, GI1788184, Length=609, Percent_Identity=26.7651888341544, Blast_Score=134, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71985061, Length=614, Percent_Identity=24.5928338762215, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71985068, Length=578, Percent_Identity=24.3944636678201, Blast_Score=101, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6320548, Length=609, Percent_Identity=25.7799671592775, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6321883, Length=583, Percent_Identity=24.6998284734134, Blast_Score=114, Evalue=5e-26, Organism=Drosophila melanogaster, GI28571570, Length=493, Percent_Identity=22.5152129817444, Blast_Score=72, Evalue=8e-13,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 64581; Mature: 64581
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPAQKHTLETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH PLGANPRQLAERIVAALTAQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAQGRA CCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCC FGASEREHGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAG CCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCC VQIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRD CEECCEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCC ADDLEAIRKFAVAYLRREQDMDLKAFGVKFDQYYLESSLYTEGRVEKTVDALIAAGMTYE HHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEE QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTI CCCCEEEEECCCCCCHHHHHHHCCCEEEEEECHHHHHHHHHHCCCEEEEEECCCCCCCHH ARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGATP HHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHCCCCCC GSEVSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARI CCCCCHHHHHHHHHCCCCHHEEEEEEECCCCCEEEEEEEEEEECCCCCCEEEEEEHHHHH CSVLNEWKSRYGATDALLPGADLSPLDSKQAMALMQKLAEYPDVLAHAANELAPHAVAFY HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRELASEFHSFYNAERVLVDEEAPRTARIALLAATRQVLENGLAMLGVSAPSKM HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure MLPAQKHTLETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH PLGANPRQLAERIVAALTAQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAQGRA CCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCC FGASEREHGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAG CCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCC VQIGNLAISTQARARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRD CEECCEEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCC ADDLEAIRKFAVAYLRREQDMDLKAFGVKFDQYYLESSLYTEGRVEKTVDALIAAGMTYE HHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEE QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTI CCCCEEEEECCCCCCHHHHHHHCCCEEEEEECHHHHHHHHHHCCCEEEEEECCCCCCCHH ARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGATP HHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHCCCCCC GSEVSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARI CCCCCHHHHHHHHHCCCCHHEEEEEEECCCCCEEEEEEEEEEECCCCCCEEEEEEHHHHH CSVLNEWKSRYGATDALLPGADLSPLDSKQAMALMQKLAEYPDVLAHAANELAPHAVAFY HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRELASEFHSFYNAERVLVDEEAPRTARIALLAATRQVLENGLAMLGVSAPSKM HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA