| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yycJ [H]
Identifier: 83721268
GI number: 83721268
Start: 2155152
End: 2155928
Strand: Direct
Name: yycJ [H]
Synonym: BTH_I1908
Alternate gene names: 83721268
Gene position: 2155152-2155928 (Clockwise)
Preceding gene: 83720755
Following gene: 83719265
Centisome position: 56.58
GC content: 69.88
Gene sequence:
>777_bases GTGCGATTCGCGAGCCTCGGAAGCGGCAGCGAAGGCAATGCGCTCGTCGTCGAAGCGTCAAGTGGCGCGACGACGACGCG CGTCCTGCTCGACTGCGGCTTCTCGGCGAAGGAGCTCGAACGCCGGCTCGCACGTGTCGGTTTGCGCGTCGACGATCTCG ATGCGATCCTGGTCACTCACGAACACGGCGACCATGTCGGTTGCGCGCTGACACTCGCCCGCCGGGCGTCGCTGCCGCTG TACACGAGCTGGGGCACCGCGCGCGCGGTCGGCGCGGACGAGGCCGGCGTCGATCTCCGCGTGCTCTGGGGCGACGAAAC AGCCGCGGTAGGCGATTTGTGCGTGCTTCCCTATACCGTTCCGCACGATGCGCGCGAACCGCTCCAGTTCGTCTTCAGCG ACGGCGCGACGCGTCTTGGCGTGCTGACCGACGTCGGCATGTCTACGCCGCATATCGGCACCGTGCTGAGCGGCTGCGAC GGCCTCGTGCTGGAGGCGAATCACGACGTCGCGATGCTTGCGGCCAGCCGCTATCCGGCGTCGCTGAAGGCGCGCATCGG CGGCTCGCACGGCCATCTGAGCAACGATGCGGCGGCCGCGATCCTCGCCGAGCTCGATCGCAGCCGGCTGCGGCACTTGG TGGCCGCGCACCTGAGCCAGCAGAACAACGCGCCCGCACTCGCGCAGGCGGCGCTTGCGGCGGCTTGGGGAGGGCAGGCG GACGACGTGCTCGTCGCGTCGCAGGACGGGGGATTCGGCTGGCTCAGCCTGCGCTGA
Upstream 100 bases:
>100_bases GACGCAGGTGGCCGTCGTCGATGCAAACGGCCAGATCGACACGTCATCCGACGCACGGCGAATCATCTCGCTGCTGCACG CGCAGCTGAACTAACCGCGC
Downstream 100 bases:
>100_bases TGCGCGACCGGCGAGCCGGCGCACGCCGGGGCCGGCTGGTTCGGGCGCGGCACGGCGCCGACGGGCCGCGCAACGCCGAT GCGGGGCCGACGGGCCCGCA
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MRFASLGSGSEGNALVVEASSGATTTRVLLDCGFSAKELERRLARVGLRVDDLDAILVTHEHGDHVGCALTLARRASLPL YTSWGTARAVGADEAGVDLRVLWGDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGTVLSGCD GLVLEANHDVAMLAASRYPASLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAAWGGQA DDVLVASQDGGFGWLSLR
Sequences:
>Translated_258_residues MRFASLGSGSEGNALVVEASSGATTTRVLLDCGFSAKELERRLARVGLRVDDLDAILVTHEHGDHVGCALTLARRASLPL YTSWGTARAVGADEAGVDLRVLWGDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGTVLSGCD GLVLEANHDVAMLAASRYPASLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAAWGGQA DDVLVASQDGGFGWLSLR >Mature_258_residues MRFASLGSGSEGNALVVEASSGATTTRVLLDCGFSAKELERRLARVGLRVDDLDAILVTHEHGDHVGCALTLARRASLPL YTSWGTARAVGADEAGVDLRVLWGDETAAVGDLCVLPYTVPHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGTVLSGCD GLVLEANHDVAMLAASRYPASLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAAWGGQA DDVLVASQDGGFGWLSLR
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 26862; Mature: 26862
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFASLGSGSEGNALVVEASSGATTTRVLLDCGFSAKELERRLARVGLRVDDLDAILVTH CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEE EHGDHVGCALTLARRASLPLYTSWGTARAVGADEAGVDLRVLWGDETAAVGDLCVLPYTV CCCCCHHHEEEHHHHCCCCEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCEEEECEEC PHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGTVLSGCDGLVLEANHDVAMLAASRYPA CCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEECCCCEEEEEECCCCC SLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAAWGGQA EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC DDVLVASQDGGFGWLSLR CCEEEEECCCCEEEEEEC >Mature Secondary Structure MRFASLGSGSEGNALVVEASSGATTTRVLLDCGFSAKELERRLARVGLRVDDLDAILVTH CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEE EHGDHVGCALTLARRASLPLYTSWGTARAVGADEAGVDLRVLWGDETAAVGDLCVLPYTV CCCCCHHHEEEHHHHCCCCEEECCCCEEECCCCCCCCEEEEEECCCCCCCCCEEEECEEC PHDAREPLQFVFSDGATRLGVLTDVGMSTPHIGTVLSGCDGLVLEANHDVAMLAASRYPA CCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEECCCCEEEEEECCCCC SLKARIGGSHGHLSNDAAAAILAELDRSRLRHLVAAHLSQQNNAPALAQAALAAAWGGQA EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC DDVLVASQDGGFGWLSLR CCEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]