| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83720755
Identifier: 83720755
GI number: 83720755
Start: 2153889
End: 2155145
Strand: Direct
Name: 83720755
Synonym: BTH_I1907
Alternate gene names: NA
Gene position: 2153889-2155145 (Clockwise)
Preceding gene: 83718668
Following gene: 83721268
Centisome position: 56.54
GC content: 67.94
Gene sequence:
>1257_bases GTGAGGCCTTACGCGGCCGTCCGCGCGGCCGCGCCGCATCCCGATCGATCCGACACCGACCCGGCCGCTCCCGGCGTCGC GCGTGACACGCGTTCTAGCAAGACGAAGGACTTCATGAAACATTCCGCCTTTTCCTCCCGTGCGATCCAGATTTCGGTGC TGGCGCTCGCGCTGGGCGCGCTCGCCGGCTGCGACACGCTGAACGACTACCTCGCGCCCGACCGGGTCAACTACAAGTCG ACCGGGTCTGCGCCGCCGCTGCAGGTGCCGCAGGATCTGACGGCGATGCCGCTCAGCCCGTCGTACGTCGCGCCGCCGAC GAATTCGGGCCTGGGCTCCGCGCCGACGCGCGCGGTGACGGCCGCGGGTAACACGACGGAGGGGCAGCCGAGCGCGCAGG ATCCGTTCGGCATGCACGTCGAGCGCGACGGCGACCGCCGCTGGCTCGTCGTCGACGGCCGCTCGCCCGAACAGCTGTGG CCGCAGTTGAAGGAGTTCTGGCAGGACAACGGCTTCGTGCTGAAGACGGACGCGCCGTCGACGGGCATCATGGCGACCGA CTGGGCGGAAAATCGCGCGAACATTCCCGACGACTGGTTCCGCCGCACGATCGGCCGAGTGATCGATTTCGCCTATTCGT CGGGCACGCGCGATCGCTTCCGCACGCTCGTCACGCGCACGTCGGACGGCAATACCGACATCTCGATCACGCATAGCGCG ATGGAGGAAAAGCTGACGGGCGCGCAGGGCGGCACGTCGTCGCGCTGGGAGGAGCGTCCGCGCAATCCGGTGCTCGAGGC CGTGTTCCTCGCGAAGCTGATGGAGAAGTTCGGCCTGACCGATGCGCAGGCGAAGCAACTGCTCGCCGACGCGCGTCCGG CCACCGCGCCCGTGACCGTCGTCGGCGCCGGCGGCGCATCGACGCTCGATCTGGCCGAATCGTTCGACCGCGCTTGGCTG CGTGTCGGGCTCGCGCTCGACCGCACGAACTTCGCGGTCGACAACCGCGATCGCTCGAAGGGCGTGTACTACGTCCGTTA CGCGAACTCGATGGAAGAGCTCAAGCGCGACGGCCTGTTCGGCAAGCTGTTCTACGGCGGCCCGACTGCCGCGAAACCGG GCAAGGAATTCCTCGTCAACGTGCGCGCGCAAGGCGATGCGAAGACGCAGGTGGCCGTCGTCGATGCAAACGGCCAGATC GACACGTCATCCGACGCACGGCGAATCATCTCGCTGCTGCACGCGCAGCTGAACTAA
Upstream 100 bases:
>100_bases AAATGGGCAAGATCGCGGGCGGCATTCGCCTGCCGCTTACGCCGCTCGACGAGCGCTGCCACGAAGCCGTGCGCGGTGCG CTTCGCGAGGCCGGCCTCCT
Downstream 100 bases:
>100_bases CCGCGCGTGCGATTCGCGAGCCTCGGAAGCGGCAGCGAAGGCAATGCGCTCGTCGTCGAAGCGTCAAGTGGCGCGACGAC GACGCGCGTCCTGCTCGACT
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MRPYAAVRAAAPHPDRSDTDPAAPGVARDTRSSKTKDFMKHSAFSSRAIQISVLALALGALAGCDTLNDYLAPDRVNYKS TGSAPPLQVPQDLTAMPLSPSYVAPPTNSGLGSAPTRAVTAAGNTTEGQPSAQDPFGMHVERDGDRRWLVVDGRSPEQLW PQLKEFWQDNGFVLKTDAPSTGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRDRFRTLVTRTSDGNTDISITHSA MEEKLTGAQGGTSSRWEERPRNPVLEAVFLAKLMEKFGLTDAQAKQLLADARPATAPVTVVGAGGASTLDLAESFDRAWL RVGLALDRTNFAVDNRDRSKGVYYVRYANSMEELKRDGLFGKLFYGGPTAAKPGKEFLVNVRAQGDAKTQVAVVDANGQI DTSSDARRIISLLHAQLN
Sequences:
>Translated_418_residues MRPYAAVRAAAPHPDRSDTDPAAPGVARDTRSSKTKDFMKHSAFSSRAIQISVLALALGALAGCDTLNDYLAPDRVNYKS TGSAPPLQVPQDLTAMPLSPSYVAPPTNSGLGSAPTRAVTAAGNTTEGQPSAQDPFGMHVERDGDRRWLVVDGRSPEQLW PQLKEFWQDNGFVLKTDAPSTGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRDRFRTLVTRTSDGNTDISITHSA MEEKLTGAQGGTSSRWEERPRNPVLEAVFLAKLMEKFGLTDAQAKQLLADARPATAPVTVVGAGGASTLDLAESFDRAWL RVGLALDRTNFAVDNRDRSKGVYYVRYANSMEELKRDGLFGKLFYGGPTAAKPGKEFLVNVRAQGDAKTQVAVVDANGQI DTSSDARRIISLLHAQLN >Mature_418_residues MRPYAAVRAAAPHPDRSDTDPAAPGVARDTRSSKTKDFMKHSAFSSRAIQISVLALALGALAGCDTLNDYLAPDRVNYKS TGSAPPLQVPQDLTAMPLSPSYVAPPTNSGLGSAPTRAVTAAGNTTEGQPSAQDPFGMHVERDGDRRWLVVDGRSPEQLW PQLKEFWQDNGFVLKTDAPSTGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRDRFRTLVTRTSDGNTDISITHSA MEEKLTGAQGGTSSRWEERPRNPVLEAVFLAKLMEKFGLTDAQAKQLLADARPATAPVTVVGAGGASTLDLAESFDRAWL RVGLALDRTNFAVDNRDRSKGVYYVRYANSMEELKRDGLFGKLFYGGPTAAKPGKEFLVNVRAQGDAKTQVAVVDANGQI DTSSDARRIISLLHAQLN
Specific function: Unknown
COG id: COG3317
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45314; Mature: 45314
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPYAAVRAAAPHPDRSDTDPAAPGVARDTRSSKTKDFMKHSAFSSRAIQISVLALALGA CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHH LAGCDTLNDYLAPDRVNYKSTGSAPPLQVPQDLTAMPLSPSYVAPPTNSGLGSAPTRAVT HHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEE AAGNTTEGQPSAQDPFGMHVERDGDRRWLVVDGRSPEQLWPQLKEFWQDNGFVLKTDAPS ECCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC TGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRDRFRTLVTRTSDGNTDISITHSA CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCEEEEEHHH MEEKLTGAQGGTSSRWEERPRNPVLEAVFLAKLMEKFGLTDAQAKQLLADARPATAPVTV HHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEE VGAGGASTLDLAESFDRAWLRVGLALDRTNFAVDNRDRSKGVYYVRYANSMEELKRDGLF EECCCCCHHHHHHHHHHHHHHHHEEECCCCCEECCCCCCCCEEEEEECCHHHHHHHCCCE GKLFYGGPTAAKPGKEFLVNVRAQGDAKTQVAVVDANGQIDTSSDARRIISLLHAQLN EEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRPYAAVRAAAPHPDRSDTDPAAPGVARDTRSSKTKDFMKHSAFSSRAIQISVLALALGA CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHH LAGCDTLNDYLAPDRVNYKSTGSAPPLQVPQDLTAMPLSPSYVAPPTNSGLGSAPTRAVT HHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEE AAGNTTEGQPSAQDPFGMHVERDGDRRWLVVDGRSPEQLWPQLKEFWQDNGFVLKTDAPS ECCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCC TGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRDRFRTLVTRTSDGNTDISITHSA CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCEEEEEHHH MEEKLTGAQGGTSSRWEERPRNPVLEAVFLAKLMEKFGLTDAQAKQLLADARPATAPVTV HHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEE VGAGGASTLDLAESFDRAWLRVGLALDRTNFAVDNRDRSKGVYYVRYANSMEELKRDGLF EECCCCCHHHHHHHHHHHHHHHHEEECCCCCEECCCCCCCCEEEEEECCHHHHHHHCCCE GKLFYGGPTAAKPGKEFLVNVRAQGDAKTQVAVVDANGQIDTSSDARRIISLLHAQLN EEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]