Click here to switch to the map view.

The map label for this gene is yfjD [H]

Identifier: 83721204

GI number: 83721204

Start: 1283876

End: 1285171

Strand: Reverse

Name: yfjD [H]

Synonym: BTH_I1137

Alternate gene names: 83721204

Gene position: 1285171-1283876 (Counterclockwise)

Preceding gene: 83721521

Following gene: 83719679

Centisome position: 33.74

GC content: 63.81

Gene sequence:

>1296_bases
GTGGACCAAATTCCCTTATGGGCGCAAATCGGCGCCGTCTTTCTGCTTCTCCTCTGCTCCAGCTTCTTCTCCATTTCTGA
AACCGCGATGATGGCGCTCAACCGCCATCGGCTCAAACATCTCGCGGCCCGCGGCGCGCTCGGCGCAAGAACGACCCAGC
GCCTCCTCGCGCGAACCGACCAGTTGCTGAGCGTGATCCTGATCGGCAACAACCTGTTCAACACGATCATCCCGGTACTG
ACGACGTCGATCGCGCTGCACACGTTCGGCCACGACAACTTCGTGCTGTCGATCGCGACCGGCATCGTCGCGTTCCTGAT
CATCGTGTTCGCGGAAATCACGCCGAAGATCGTCGGCGCGACGTACCCGGAGCGGATCGCATTGTCGGCGAGCGTCGTGA
TCGCGCCGCTGATGCGCGTGATGATGCCCGTCGTGTGGTTCGTCAACACGCTGTCGGGGGCGATCCTCGCCGCGTTGCGA
ATCAATACGAAGGCGGGCCGCGACCAGCGGCTGTCGACCGAGGAACTGCGCTCGCTCGTGCTCGAATCCGGCAGCTTCAT
GCCGACCAAGCACCGCAGCATCCTGCTCAACCTGTTCGATCTCGAGAACATCACTGTCGACGACGTAATGATTCCGCGCC
GCCAGATCGAAGCGCTCAACATCCTCGCGCCGCTCGACGACGTGCTGCACCAGCTCGAGACCTGCTATCACAATCGACTC
GTCGTCTACGAGGGCGACATCGACCGCGTGCTCGGCGTGCTGCACGTGCGCAAGACGCTCGCCGCGTTCCACAACCAGGA
GTTCGACCGCGAGACGCTGCGCGAGCTGCTTGCGGAACCGTACTACGTGCCGGCCGGCACGCCGGTGTTCCAGCAGTTGC
AGTACTTCCAGGAGAGCCGGCACCGCACCGCGCTCGTCGTCAACGAGTACGGCGAGCTGGAGGGGCTCGTCACGCCGGAG
GACATCATCGAGGAACTGATCGGCGAATTCACGACGACGATGCCGCGCAGCGAGAACTCGAAAAGCGGCTGGGACGCGAA
CGGCGAATGCATCGTCGCGGCCAGCATGCCGCTGCGCGAGTTGAACCGCTGGCTGCACCTCGGCCTGCCGACCAACGGGC
CCAAGACGCTCAACGGCCTGATCCTCGAAGAGCTCGAGGAAATTCCCGAGGACGACGTCTGCCTGAAGATCGGCGACGTG
ATGATCGAAGTGATGCGCACCGAGGATCAGGGCGTGCGCACGGTCAAGCTATTCAAGCCGCGCACGCCGCGCGGAGGGCG
TGCGCCCGGCGCGTGA

Upstream 100 bases:

>100_bases
CGCGGCGGCGCTGCGCGGACAATGCAGCGCCGTACGCGAACCGGCCGCCCCCCTCTGCTATAGTCTTTTCCATTCCTGTC
ATTCACCGACTCTGCGACGC

Downstream 100 bases:

>100_bases
TGCGCGATGCGCGGCGCGGTTGGCCGATCGACCGACTGTCGGCCGCGCGCTCGACGCGCGATGATCGTTTCATCGTGTCG
AGCAGGCGGCCGCGAGGCCG

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDQIPLWAQIGAVFLLLLCSSFFSISETAMMALNRHRLKHLAARGALGARTTQRLLARTDQLLSVILIGNNLFNTIIPVL
TTSIALHTFGHDNFVLSIATGIVAFLIIVFAEITPKIVGATYPERIALSASVVIAPLMRVMMPVVWFVNTLSGAILAALR
INTKAGRDQRLSTEELRSLVLESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIEALNILAPLDDVLHQLETCYHNRL
VVYEGDIDRVLGVLHVRKTLAAFHNQEFDRETLRELLAEPYYVPAGTPVFQQLQYFQESRHRTALVVNEYGELEGLVTPE
DIIEELIGEFTTTMPRSENSKSGWDANGECIVAASMPLRELNRWLHLGLPTNGPKTLNGLILEELEEIPEDDVCLKIGDV
MIEVMRTEDQGVRTVKLFKPRTPRGGRAPGA

Sequences:

>Translated_431_residues
MDQIPLWAQIGAVFLLLLCSSFFSISETAMMALNRHRLKHLAARGALGARTTQRLLARTDQLLSVILIGNNLFNTIIPVL
TTSIALHTFGHDNFVLSIATGIVAFLIIVFAEITPKIVGATYPERIALSASVVIAPLMRVMMPVVWFVNTLSGAILAALR
INTKAGRDQRLSTEELRSLVLESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIEALNILAPLDDVLHQLETCYHNRL
VVYEGDIDRVLGVLHVRKTLAAFHNQEFDRETLRELLAEPYYVPAGTPVFQQLQYFQESRHRTALVVNEYGELEGLVTPE
DIIEELIGEFTTTMPRSENSKSGWDANGECIVAASMPLRELNRWLHLGLPTNGPKTLNGLILEELEEIPEDDVCLKIGDV
MIEVMRTEDQGVRTVKLFKPRTPRGGRAPGA
>Mature_431_residues
MDQIPLWAQIGAVFLLLLCSSFFSISETAMMALNRHRLKHLAARGALGARTTQRLLARTDQLLSVILIGNNLFNTIIPVL
TTSIALHTFGHDNFVLSIATGIVAFLIIVFAEITPKIVGATYPERIALSASVVIAPLMRVMMPVVWFVNTLSGAILAALR
INTKAGRDQRLSTEELRSLVLESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIEALNILAPLDDVLHQLETCYHNRL
VVYEGDIDRVLGVLHVRKTLAAFHNQEFDRETLRELLAEPYYVPAGTPVFQQLQYFQESRHRTALVVNEYGELEGLVTPE
DIIEELIGEFTTTMPRSENSKSGWDANGECIVAASMPLRELNRWLHLGLPTNGPKTLNGLILEELEEIPEDDVCLKIGDV
MIEVMRTEDQGVRTVKLFKPRTPRGGRAPGA

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=347, Percent_Identity=25.0720461095101, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI40068053, Length=343, Percent_Identity=25.0728862973761, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI40068055, Length=343, Percent_Identity=25.0728862973761, Blast_Score=76, Evalue=6e-14,
Organism=Escherichia coli, GI145693175, Length=404, Percent_Identity=38.8613861386139, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI1790664, Length=427, Percent_Identity=23.8875878220141, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI87082033, Length=279, Percent_Identity=29.0322580645161, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1786879, Length=218, Percent_Identity=26.1467889908257, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1788119, Length=241, Percent_Identity=23.6514522821577, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48119; Mature: 48119

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQIPLWAQIGAVFLLLLCSSFFSISETAMMALNRHRLKHLAARGALGARTTQRLLARTD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QLLSVILIGNNLFNTIIPVLTTSIALHTFGHDNFVLSIATGIVAFLIIVFAEITPKIVGA
HHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TYPERIALSASVVIAPLMRVMMPVVWFVNTLSGAILAALRINTKAGRDQRLSTEELRSLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIEALNILAPLDDVLHQLETCYHNRL
HHCCCCCCCCCHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VVYEGDIDRVLGVLHVRKTLAAFHNQEFDRETLRELLAEPYYVPAGTPVFQQLQYFQESR
EEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHCC
HRTALVVNEYGELEGLVTPEDIIEELIGEFTTTMPRSENSKSGWDANGECIVAASMPLRE
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHH
LNRWLHLGLPTNGPKTLNGLILEELEEIPEDDVCLKIGDVMIEVMRTEDQGVRTVKLFKP
HHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
RTPRGGRAPGA
CCCCCCCCCCC
>Mature Secondary Structure
MDQIPLWAQIGAVFLLLLCSSFFSISETAMMALNRHRLKHLAARGALGARTTQRLLARTD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QLLSVILIGNNLFNTIIPVLTTSIALHTFGHDNFVLSIATGIVAFLIIVFAEITPKIVGA
HHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
TYPERIALSASVVIAPLMRVMMPVVWFVNTLSGAILAALRINTKAGRDQRLSTEELRSLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LESGSFMPTKHRSILLNLFDLENITVDDVMIPRRQIEALNILAPLDDVLHQLETCYHNRL
HHCCCCCCCCCHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VVYEGDIDRVLGVLHVRKTLAAFHNQEFDRETLRELLAEPYYVPAGTPVFQQLQYFQESR
EEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCCCHHHHHHHHHHHCC
HRTALVVNEYGELEGLVTPEDIIEELIGEFTTTMPRSENSKSGWDANGECIVAASMPLRE
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHH
LNRWLHLGLPTNGPKTLNGLILEELEEIPEDDVCLKIGDVMIEVMRTEDQGVRTVKLFKP
HHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
RTPRGGRAPGA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]