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The map label for this gene is tapB [H]

Identifier: 83719679

GI number: 83719679

Start: 1282498

End: 1283769

Strand: Reverse

Name: tapB [H]

Synonym: BTH_I1136

Alternate gene names: 83719679

Gene position: 1283769-1282498 (Counterclockwise)

Preceding gene: 83721204

Following gene: 83719565

Centisome position: 33.7

GC content: 70.99

Gene sequence:

>1272_bases
ATGTCCCCCCCCTCCAACGCCTCTTTTCCTTCCGCGCGGCAGGCAACACCCGCCACCGGGGCATCCGTGCCTCCCCGGCT
GCGCCATCCCGAACGTGTCGATGACGCGCCCGCCGTGGGCATCGTCGCCGATATGCTGCGTGCGGCGCACGAGCGCGACG
CGTCCGATATCCATGTCGAGCCCTGCGAATCCGGCTGGCGGGTGCGCCTGCGGATCGACGGCGTGCTGCACGAATTCGCG
CGGCCGCCGGCTCATTTGCGCGACGCGTGCGTGACGCGCATCAAGGTGCTCGCGCGGATGGACATCGCCGAGCGCCGCGT
GCCGCAGGACGGCCGGCTGCGGCTCGCGCTCGCGCCGGGGCGCGCAGGCGACTACCGCGTGAGCTCGCTGCCGACGCTGC
ATGGCGAGAAGCTCGTGCTGCGGCGTCTGGAGACGCTGCCCGCCGATCTGTCGCTCGCCGCGCTCGGCTTCGACGCGGCT
CAGGCAAGCGGCGTCGAGGCGGCGATCGGCGCGCCGCACGGTCTCGTCCTTGTCACGGGGCCGACGGGCAGCGGCAAGAC
GCTGTCACTGTATTGCTTCCTGCAAATGCTGAACGACGTATCGCGCAACGTCTGCACGGTCGAGGACCCGGCCGAGATCG
AGCTCGACGGGATCAATCAGGTCGGCGTGCGTGAAAAGGCGGGCCTGACCTTCGCAGTCGCGCTGCGCGCATTCCTGCGT
CAGGACCCCGACGTGATCATGGTCGGCGAGATACGCGATGCGCAAACCGCCGATGTCGCGCTGAAAGCCGCGCAGACGGG
CCACCTCGTGCTGTCGACGCTGCATACGAACGACGCGCCCGCCGCGGTGGCTCGCCTGCTCGATATCGGTGTCGCGCCAT
ACAACCTCGCCGCCGCGCTGCGGCTCGTGACGGCGCAGCGGCTCGTGCGGCGCCTGTGCCCCGCTTGCCGCGCGCCGTCG
GACACGTCGCCCGCCGCGCTGCGCGCCGCAGGACTCGCCGCCGCGCCGATCGACGCCGGCTGGCGCCCGTATGCCGCGAC
GGGATGCCCCGCGTGCCATGGAATCGGTTATCGGGGGCGCATCGGCATCCATCAGGTGATGCCGCTGTCCGCCGAGTTGC
GCAATCTGATCGCCGCGTGCGCGAGCAGCGCCGAACTCGCGCGGCAAGCATGCGCCGAAGGCATGACGAGCCTACGCGAT
GCTGCGCTTGCCCGCGTTCGCGACGGCACGACGAGCTTGAGCGAAGCGCTCGGCGCAACGGAGGCCCCATGA

Upstream 100 bases:

>100_bases
ATGCGCGGCGCGGTTGGCCGATCGACCGACTGTCGGCCGCGCGCTCGACGCGCGATGATCGTTTCATCGTGTCGAGCAGG
CGGCCGCGAGGCCGGTTCCG

Downstream 100 bases:

>100_bases
GCCCGCATAGTCCGGCCGCGCCGCTCGAGGCCCGGTATCGTTGGACGGGCGTGACGACCGACGGCGTGCGCCGCCGCGGC
ATGCTGGTCGCCGTCAATCC

Product: type II/IV secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSPPSNASFPSARQATPATGASVPPRLRHPERVDDAPAVGIVADMLRAAHERDASDIHVEPCESGWRVRLRIDGVLHEFA
RPPAHLRDACVTRIKVLARMDIAERRVPQDGRLRLALAPGRAGDYRVSSLPTLHGEKLVLRRLETLPADLSLAALGFDAA
QASGVEAAIGAPHGLVLVTGPTGSGKTLSLYCFLQMLNDVSRNVCTVEDPAEIELDGINQVGVREKAGLTFAVALRAFLR
QDPDVIMVGEIRDAQTADVALKAAQTGHLVLSTLHTNDAPAAVARLLDIGVAPYNLAAALRLVTAQRLVRRLCPACRAPS
DTSPAALRAAGLAAAPIDAGWRPYAATGCPACHGIGYRGRIGIHQVMPLSAELRNLIAACASSAELARQACAEGMTSLRD
AALARVRDGTTSLSEALGATEAP

Sequences:

>Translated_423_residues
MSPPSNASFPSARQATPATGASVPPRLRHPERVDDAPAVGIVADMLRAAHERDASDIHVEPCESGWRVRLRIDGVLHEFA
RPPAHLRDACVTRIKVLARMDIAERRVPQDGRLRLALAPGRAGDYRVSSLPTLHGEKLVLRRLETLPADLSLAALGFDAA
QASGVEAAIGAPHGLVLVTGPTGSGKTLSLYCFLQMLNDVSRNVCTVEDPAEIELDGINQVGVREKAGLTFAVALRAFLR
QDPDVIMVGEIRDAQTADVALKAAQTGHLVLSTLHTNDAPAAVARLLDIGVAPYNLAAALRLVTAQRLVRRLCPACRAPS
DTSPAALRAAGLAAAPIDAGWRPYAATGCPACHGIGYRGRIGIHQVMPLSAELRNLIAACASSAELARQACAEGMTSLRD
AALARVRDGTTSLSEALGATEAP
>Mature_422_residues
SPPSNASFPSARQATPATGASVPPRLRHPERVDDAPAVGIVADMLRAAHERDASDIHVEPCESGWRVRLRIDGVLHEFAR
PPAHLRDACVTRIKVLARMDIAERRVPQDGRLRLALAPGRAGDYRVSSLPTLHGEKLVLRRLETLPADLSLAALGFDAAQ
ASGVEAAIGAPHGLVLVTGPTGSGKTLSLYCFLQMLNDVSRNVCTVEDPAEIELDGINQVGVREKAGLTFAVALRAFLRQ
DPDVIMVGEIRDAQTADVALKAAQTGHLVLSTLHTNDAPAAVARLLDIGVAPYNLAAALRLVTAQRLVRRLCPACRAPSD
TSPAALRAAGLAAAPIDAGWRPYAATGCPACHGIGYRGRIGIHQVMPLSAELRNLIAACASSAELARQACAEGMTSLRDA
ALARVRDGTTSLSEALGATEAP

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1789723, Length=382, Percent_Identity=46.0732984293194, Blast_Score=328, Evalue=6e-91,
Organism=Escherichia coli, GI1786296, Length=385, Percent_Identity=45.1948051948052, Blast_Score=311, Evalue=6e-86,
Organism=Escherichia coli, GI87082188, Length=280, Percent_Identity=35.3571428571429, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013374
- InterPro:   IPR007831
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E; PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 44531; Mature: 44399

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPSNASFPSARQATPATGASVPPRLRHPERVDDAPAVGIVADMLRAAHERDASDIHVE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE
PCESGWRVRLRIDGVLHEFARPPAHLRDACVTRIKVLARMDIAERRVPQDGRLRLALAPG
ECCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
RAGDYRVSSLPTLHGEKLVLRRLETLPADLSLAALGFDAAQASGVEAAIGAPHGLVLVTG
CCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEHEECCCHHHCCCCEEECCCCCCEEEEEC
PTGSGKTLSLYCFLQMLNDVSRNVCTVEDPAEIELDGINQVGVREKAGLTFAVALRAFLR
CCCCCCHHHHHHHHHHHHHHHCCEEECCCCCEEEECCCCCCCCCHHCCCHHHHHHHHHHH
QDPDVIMVGEIRDAQTADVALKAAQTGHLVLSTLHTNDAPAAVARLLDIGVAPYNLAAAL
CCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHH
RLVTAQRLVRRLCPACRAPSDTSPAALRAAGLAAAPIDAGWRPYAATGCPACHGIGYRGR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEECCCCCCCCCCCCCCCCHHHCCCCCCC
IGIHQVMPLSAELRNLIAACASSAELARQACAEGMTSLRDAALARVRDGTTSLSEALGAT
CCHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
EAP
CCC
>Mature Secondary Structure 
SPPSNASFPSARQATPATGASVPPRLRHPERVDDAPAVGIVADMLRAAHERDASDIHVE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE
PCESGWRVRLRIDGVLHEFARPPAHLRDACVTRIKVLARMDIAERRVPQDGRLRLALAPG
ECCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
RAGDYRVSSLPTLHGEKLVLRRLETLPADLSLAALGFDAAQASGVEAAIGAPHGLVLVTG
CCCCEECCCCCCCCCHHHHHHHHHHCCCCCEEHEECCCHHHCCCCEEECCCCCCEEEEEC
PTGSGKTLSLYCFLQMLNDVSRNVCTVEDPAEIELDGINQVGVREKAGLTFAVALRAFLR
CCCCCCHHHHHHHHHHHHHHHCCEEECCCCCEEEECCCCCCCCCHHCCCHHHHHHHHHHH
QDPDVIMVGEIRDAQTADVALKAAQTGHLVLSTLHTNDAPAAVARLLDIGVAPYNLAAAL
CCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHH
RLVTAQRLVRRLCPACRAPSDTSPAALRAAGLAAAPIDAGWRPYAATGCPACHGIGYRGR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCEECCCCCCCCCCCCCCCCHHHCCCCCCC
IGIHQVMPLSAELRNLIAACASSAELARQACAEGMTSLRDAALARVRDGTTSLSEALGAT
CCHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
EAP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]