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The map label for this gene is araC [C]

Identifier: 83721048

GI number: 83721048

Start: 1582282

End: 1583037

Strand: Reverse

Name: araC [C]

Synonym: BTH_I1405

Alternate gene names: 83721048

Gene position: 1583037-1582282 (Counterclockwise)

Preceding gene: 83719521

Following gene: 83719799

Centisome position: 41.56

GC content: 71.3

Gene sequence:

>756_bases
GTGTATGCGCAGCCGGGACATCACACGCTATCGTGCTACCTGGACGGCGGCTACCGCACCGAGCGGCAGAAAATCGCGCG
CTACGGCGCGCCGAGCCTGCTGTGCGCGCTGCCGGGCGACCACGAATCGCGCTGGTGGGTGCGCGGCGAGATGCACTTCG
TCCACCTGTACTTCCTGCCCGAGCACTTCGCGCGGCGCGCCGTGCGCGAGCTCGACCGCGAGCCGCGCGAACTGAAGCTC
GCCGATCGCACGTATTTCGAGGATGCGCGCGTCGCCGCGCTATGCCGCTCGCTCGCGCTCGAGCACTGGGACGACGCCGA
CGGCCGGCTGCGCGTGAACGAAACCGCGCACGAGGTGCTGAGCCTCCTGCTGCGCGGGCAAAGCATGACCCACGCCGACG
CGCCGTTCAAGGGCGGGCTCGCGCCCGCCGTGCGCCGCCGCGTGCGCGACTACATCGACACGTACCTGACGCAGCCGATG
ACGCTCGGCGAGTTGGCCGAGATCGCGTCGCTATCCGAATACCATTTCTCGCGGATGTTCCGCGTGTCGTTCGGCCGCGC
GCCGCATGCGTGGATCGCCGAGCAGCGCCTTGCCCGCGCGCGCACGCTGCTGCGCACGACGTCGCTGCCGCTCGCGCAGG
TGGCCGCGCAGTGCGGCTACGCGAACGCCGTGCATCTCGGGCACCGCTTTCGCGACGCGCACGGCGCGACGCCGGGCATG
TACCGCCGCGCGATGCAGGCCGCCCAGGCTCGATAG

Upstream 100 bases:

>100_bases
GACGCTCGCCGAGGCGAACGCGAGGCTCGAGCGCTTCGCGTGGCTCGGCGATCACCTCGCGATCGCCGAATGGACGCGCG
TCACCGAGGAAAGCGAAACG

Downstream 100 bases:

>100_bases
ACGGCCGCGGGCATCGCGCCGAGGCTACGCGGCGCGCCCCGACAACGCCTGCTCGAGCGCCGCGACGCCGGCCGGCAGGT
CGACGCCCACCTTCAGATCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; Transcription Regulator AraC Family; AraC-Family Transcriptional Regulator; Transcriptional Regulator Protein AraC Family; Helix-Turn-Helix Protein; Transcriptional Regulator AraC; Transcriptional Regulator AraC-Type; HTH-Type Transcriptional Regulator; AraC Family Regulatory Protein; AraC Family Transcription Regulator; HTH-Type Transcriptional Regulator ChbR; AraC-Type Trancriptional Regulator; Transcriptional Regulator Protein; AraC Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MYAQPGHHTLSCYLDGGYRTERQKIARYGAPSLLCALPGDHESRWWVRGEMHFVHLYFLPEHFARRAVRELDREPRELKL
ADRTYFEDARVAALCRSLALEHWDDADGRLRVNETAHEVLSLLLRGQSMTHADAPFKGGLAPAVRRRVRDYIDTYLTQPM
TLGELAEIASLSEYHFSRMFRVSFGRAPHAWIAEQRLARARTLLRTTSLPLAQVAAQCGYANAVHLGHRFRDAHGATPGM
YRRAMQAAQAR

Sequences:

>Translated_251_residues
MYAQPGHHTLSCYLDGGYRTERQKIARYGAPSLLCALPGDHESRWWVRGEMHFVHLYFLPEHFARRAVRELDREPRELKL
ADRTYFEDARVAALCRSLALEHWDDADGRLRVNETAHEVLSLLLRGQSMTHADAPFKGGLAPAVRRRVRDYIDTYLTQPM
TLGELAEIASLSEYHFSRMFRVSFGRAPHAWIAEQRLARARTLLRTTSLPLAQVAAQCGYANAVHLGHRFRDAHGATPGM
YRRAMQAAQAR
>Mature_251_residues
MYAQPGHHTLSCYLDGGYRTERQKIARYGAPSLLCALPGDHESRWWVRGEMHFVHLYFLPEHFARRAVRELDREPRELKL
ADRTYFEDARVAALCRSLALEHWDDADGRLRVNETAHEVLSLLLRGQSMTHADAPFKGGLAPAVRRRVRDYIDTYLTQPM
TLGELAEIASLSEYHFSRMFRVSFGRAPHAWIAEQRLARARTLLRTTSLPLAQVAAQCGYANAVHLGHRFRDAHGATPGM
YRRAMQAAQAR

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28680; Mature: 28680

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAQPGHHTLSCYLDGGYRTERQKIARYGAPSLLCALPGDHESRWWVRGEMHFVHLYFLP
CCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCEEEEEEEECH
EHFARRAVRELDREPRELKLADRTYFEDARVAALCRSLALEHWDDADGRLRVNETAHEVL
HHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHH
SLLLRGQSMTHADAPFKGGLAPAVRRRVRDYIDTYLTQPMTLGELAEIASLSEYHFSRMF
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RVSFGRAPHAWIAEQRLARARTLLRTTSLPLAQVAAQCGYANAVHLGHRFRDAHGATPGM
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH
YRRAMQAAQAR
HHHHHHHHCCC
>Mature Secondary Structure
MYAQPGHHTLSCYLDGGYRTERQKIARYGAPSLLCALPGDHESRWWVRGEMHFVHLYFLP
CCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCEEEEEEEECH
EHFARRAVRELDREPRELKLADRTYFEDARVAALCRSLALEHWDDADGRLRVNETAHEVL
HHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHH
SLLLRGQSMTHADAPFKGGLAPAVRRRVRDYIDTYLTQPMTLGELAEIASLSEYHFSRMF
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RVSFGRAPHAWIAEQRLARARTLLRTTSLPLAQVAAQCGYANAVHLGHRFRDAHGATPGM
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH
YRRAMQAAQAR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA