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The map label for this gene is yhhS [C]

Identifier: 83719521

GI number: 83719521

Start: 1584340

End: 1585554

Strand: Reverse

Name: yhhS [C]

Synonym: BTH_I1407

Alternate gene names: 83719521

Gene position: 1585554-1584340 (Counterclockwise)

Preceding gene: 83718871

Following gene: 83721048

Centisome position: 41.62

GC content: 71.93

Gene sequence:

>1215_bases
ATGTCAGCCGATTCCGCCTCTTCCCCACGCAACGCATTCGCCACGACGCTGCAGATCGTCTCCGTCGTTTCGTTCACGTT
CGTCTGCTATCTGACGATCGGCCTGCCGCTCGCGGTGCTGCCGGGCTTCGTTCATGACGAACTCGGCTTTTCGGCGATCG
TCGCGGGCGCGGCGATCAGCGTGCAGTATTTCGCGACGCTCGCGTCGCGGCCGCTCGCCGGCCGCTGCGCGGACACGCTC
GGCCCGAAGCGCACCGTGCTGCGCGGGCTCGCCGCGTGCGGCGCGAGCGGCGCGCTGCTGTTGTCCGCGTTCGCGTTCGC
GCGCTGGCCCGCCGCGAGCATCGTGCTGCTCGTCGCGAGCCGGCTCGTGCTCGGCGTCGGCGAGAGCCTCGTCGGCACGG
GCGCGATCCTGTGGGGCATCGGCCGCGTCGGCGCCGCGCACAACGCGCGCGTCATCTCGTGGAACGGCATCGCGACATAC
GGCGCGCTCGCGATCGGCGCGCCCGTCGGCGTCGCGATCGCTCATGCGCTGATTCCCGCCGTGCTCGGCGTGCTCGTGAT
CGCGCTCGCGGCGCTCGGCTACTACCTCGCGCGGCTGATCGCGCCCGTGCCGCTCGTGCACGGCGAGCGGATGTCGTACG
CAAGCGTGTTCACCCGCGTGCTGCCGCACGGCCTTGGCCTCGCGCTCGGTTCGGCCGGCTTCGGCTCGATCGCGACGTTC
ATCACGCTCTATTACGCGTCGCGGCACTGGCCGAACGCCGCGCTGTCGCTGACCGTGTTCGGCACGCTGTTCATCGGCGC
GCGCCTGCTGTTCGCGAATACGATCAAGACGCACGGCGGGTTCCGCGTCGCGATCGTGTCGTTCGCGTTCGAATGCGCGG
GCCTCCTGATGCTGTGGCTCGCGCCCGTGCCGCACGTCGCGCTCGTCGGCGCGGCGTTGACGGGCTTCGGCTTCGCGCTG
ATCTTTCCCGCGCTCGGCGTCGAGGCGGTCGCGCTCGTGCCGCCCGCGAGCCGCGGCGCAGCGCTGTCCGCGTATTCGGT
GTTCCTCGATCTGTCGCTCGGGATCACGGGGCCGCTCGCCGGTTACGTCGCGGGCGCGTTCGGCTATGCGCAGGTGTTCC
TGTGCGCGGCCGTCGCGGCGGCGGCGGGCGTCGCGCTGTCGGCGGCGCTGTATCAGCGGCAGGCGCGCCTGTCGGGCAGC
GGCGCGGCCGCTTGA

Upstream 100 bases:

>100_bases
TTGCAGGACACTGAACTAAGCGGTACCTGCAAGAAAACCGGTTCCATGCAAAAATTCGGCTTTCGCATCAAGTGGATGCG
CGTTTTCGTTCCCGCCCCCA

Downstream 100 bases:

>100_bases
GGTCGCTTGAGGCCGCTTAAGGTCGCCCGAACGGCCGGCCGGCGGCGCCGCGTCCGGCGGCGGCCGCGCACCATCCGCTC
AGGCGGTGCGCACGAAGAAC

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSADSASSPRNAFATTLQIVSVVSFTFVCYLTIGLPLAVLPGFVHDELGFSAIVAGAAISVQYFATLASRPLAGRCADTL
GPKRTVLRGLAACGASGALLLSAFAFARWPAASIVLLVASRLVLGVGESLVGTGAILWGIGRVGAAHNARVISWNGIATY
GALAIGAPVGVAIAHALIPAVLGVLVIALAALGYYLARLIAPVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATF
ITLYYASRHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLMLWLAPVPHVALVGAALTGFGFAL
IFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLAGYVAGAFGYAQVFLCAAVAAAAGVALSAALYQRQARLSGS
GAAA

Sequences:

>Translated_404_residues
MSADSASSPRNAFATTLQIVSVVSFTFVCYLTIGLPLAVLPGFVHDELGFSAIVAGAAISVQYFATLASRPLAGRCADTL
GPKRTVLRGLAACGASGALLLSAFAFARWPAASIVLLVASRLVLGVGESLVGTGAILWGIGRVGAAHNARVISWNGIATY
GALAIGAPVGVAIAHALIPAVLGVLVIALAALGYYLARLIAPVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATF
ITLYYASRHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLMLWLAPVPHVALVGAALTGFGFAL
IFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLAGYVAGAFGYAQVFLCAAVAAAAGVALSAALYQRQARLSGS
GAAA
>Mature_403_residues
SADSASSPRNAFATTLQIVSVVSFTFVCYLTIGLPLAVLPGFVHDELGFSAIVAGAAISVQYFATLASRPLAGRCADTLG
PKRTVLRGLAACGASGALLLSAFAFARWPAASIVLLVASRLVLGVGESLVGTGAILWGIGRVGAAHNARVISWNGIATYG
ALAIGAPVGVAIAHALIPAVLGVLVIALAALGYYLARLIAPVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATFI
TLYYASRHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLMLWLAPVPHVALVGAALTGFGFALI
FPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLAGYVAGAFGYAQVFLCAAVAAAAGVALSAALYQRQARLSGSG
AAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family [H]

Homologues:

Organism=Escherichia coli, GI87082270, Length=393, Percent_Identity=49.3638676844784, Blast_Score=335, Evalue=4e-93,
Organism=Escherichia coli, GI1788662, Length=393, Percent_Identity=44.529262086514, Blast_Score=267, Evalue=8e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40851; Mature: 40720

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADSASSPRNAFATTLQIVSVVSFTFVCYLTIGLPLAVLPGFVHDELGFSAIVAGAAIS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCHHHHHHHHHHH
VQYFATLASRPLAGRCADTLGPKRTVLRGLAACGASGALLLSAFAFARWPAASIVLLVAS
HHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
RLVLGVGESLVGTGAILWGIGRVGAAHNARVISWNGIATYGALAIGAPVGVAIAHALIPA
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHH
VLGVLVIALAALGYYLARLIAPVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ITLYYASRHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLMLWL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
APVPHVALVGAALTGFGFALIFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHH
GYVAGAFGYAQVFLCAAVAAAAGVALSAALYQRQARLSGSGAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SADSASSPRNAFATTLQIVSVVSFTFVCYLTIGLPLAVLPGFVHDELGFSAIVAGAAIS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHCCHHHHHHHHHHH
VQYFATLASRPLAGRCADTLGPKRTVLRGLAACGASGALLLSAFAFARWPAASIVLLVAS
HHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHH
RLVLGVGESLVGTGAILWGIGRVGAAHNARVISWNGIATYGALAIGAPVGVAIAHALIPA
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHH
VLGVLVIALAALGYYLARLIAPVPLVHGERMSYASVFTRVLPHGLGLALGSAGFGSIATF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ITLYYASRHWPNAALSLTVFGTLFIGARLLFANTIKTHGGFRVAIVSFAFECAGLLMLWL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
APVPHVALVGAALTGFGFALIFPALGVEAVALVPPASRGAALSAYSVFLDLSLGITGPLA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHH
GYVAGAFGYAQVFLCAAVAAAAGVALSAALYQRQARLSGSGAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA