| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83721025
Identifier: 83721025
GI number: 83721025
Start: 2354565
End: 2355770
Strand: Reverse
Name: 83721025
Synonym: BTH_I2080
Alternate gene names: NA
Gene position: 2355770-2354565 (Counterclockwise)
Preceding gene: 83719582
Following gene: 83720069
Centisome position: 61.84
GC content: 71.31
Gene sequence:
>1206_bases ATGAAAAAGCTTCTCGCAGCCGTCGGATTGTCGTTGATCCTCGTGTCGGCCGCCGCGAACGCGGCGGTGCCGTCGCTGCA GCAAATCCAGCAATCGATCGCGCAAGGCAACTGGCAGCGCGCCGACGCGCAGCTCTCTCAGGTGATCGACGCATACCCGG ACAACGCGCGCGCCCGCTATCTGTACGGCCAGGTGCTCGATCGCGAAGGCCGCCCCGCCGAAGCGCTCGCGCAGATCGAG CGCGCGAAATCGCTCGATCCGCAATTGCGCTTCACCGATCCGTCACGCTTCGCGCAGACGGAAGCGCGCGTGCGCGCCGA CGCGCGCCGCGCGACGTCCGCGCAGAGCTCGCGCTCGGCGACCTCGGGCGGCATGCTCGTCGCGCCGCAAACGCAGGGCC AGGCCCAATCGCAATTCGCCGCCGCGCCTGCGGCGCCCGCGCACCGCGGTCCGTCGGCGGGCATGTGGATCGGCTTCGCG GTGCTGATCGGCGCGATCGTGCTCGTGCTGCGCCGAACGCTGCGCCGCGCGCGCTCGGCGGACGATCAGCGCGCCGGCGA CGAACGTCGCGCGCAGCTCAAGCGCGCAACCGACGTCCTCAACGACGTGCGCCCGCTCAAGCTCGACGCGCGACTGTCGA CGGCACCGGGCGCCGGCGCGCTCAACGGCGAGATCGAGGCGCTCGAAGCACAGGCGCGCGAACTCGTCGAGACGCTGTCG AACGGCCAGAATCCGGTGCCGCCGTACCGGCTCGACGAACTGGAGAAACAGTTCGCGAGCCTGAAGGCGCGCGTCGAGGG CCGCCCGGACCCGGGCGCGGCCTCGGCCGCGGCGAACGCCCCTGGACAAACAGGCTCGGTGTTTGCTCAGGAGGCCGATC GGTTGACGGGCGCGCAGGGCCAGCCGCCCTACTCGCCCTATCCGCCGCAACCGCAACAGCAACCGCCCGTCGTGATCCAG CAAGGCGGCGGCTTCGGCGGCGGCATGGGCGGCCTGCTCACGGGCGTGCTGCTCGGCCAGGCGATGTCGAACGGCCGCGA CCGCGTGATCGAGCGCGAAGTGATCGTCGACGACGAAGCGCGGCGCCGCGCGGGCGCCGATCCGGGCATCGACTTCGGCC AGGGTGACAGCTGGGACAGCGGCGGCTCGGACGGCGGCGGCATCGATCTCGGCAGCAGTGGCGACGATTGGAGCAACAAC GGTTGA
Upstream 100 bases:
>100_bases AGCCGGCGCTTCGCGGCGCGGCGGCGCGGGCGCGCTCGCTTCGCCCCACCGTCGCGCCGCGAACATCCGCAAGGAGACGG GCCGAGCGCCCGAACCGATC
Downstream 100 bases:
>100_bases CGACGGGCGACGGAAACGACGAAATGGGCCGGAAACGGCCCATTTTTTTGCGCGCCCCTTTGTCAAGATTTTTCAGATGA ACTATCGATAAAGGATCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKKLLAAVGLSLILVSAAANAAVPSLQQIQQSIAQGNWQRADAQLSQVIDAYPDNARARYLYGQVLDREGRPAEALAQIE RAKSLDPQLRFTDPSRFAQTEARVRADARRATSAQSSRSATSGGMLVAPQTQGQAQSQFAAAPAAPAHRGPSAGMWIGFA VLIGAIVLVLRRTLRRARSADDQRAGDERRAQLKRATDVLNDVRPLKLDARLSTAPGAGALNGEIEALEAQARELVETLS NGQNPVPPYRLDELEKQFASLKARVEGRPDPGAASAAANAPGQTGSVFAQEADRLTGAQGQPPYSPYPPQPQQQPPVVIQ QGGGFGGGMGGLLTGVLLGQAMSNGRDRVIEREVIVDDEARRRAGADPGIDFGQGDSWDSGGSDGGGIDLGSSGDDWSNN G
Sequences:
>Translated_401_residues MKKLLAAVGLSLILVSAAANAAVPSLQQIQQSIAQGNWQRADAQLSQVIDAYPDNARARYLYGQVLDREGRPAEALAQIE RAKSLDPQLRFTDPSRFAQTEARVRADARRATSAQSSRSATSGGMLVAPQTQGQAQSQFAAAPAAPAHRGPSAGMWIGFA VLIGAIVLVLRRTLRRARSADDQRAGDERRAQLKRATDVLNDVRPLKLDARLSTAPGAGALNGEIEALEAQARELVETLS NGQNPVPPYRLDELEKQFASLKARVEGRPDPGAASAAANAPGQTGSVFAQEADRLTGAQGQPPYSPYPPQPQQQPPVVIQ QGGGFGGGMGGLLTGVLLGQAMSNGRDRVIEREVIVDDEARRRAGADPGIDFGQGDSWDSGGSDGGGIDLGSSGDDWSNN G >Mature_401_residues MKKLLAAVGLSLILVSAAANAAVPSLQQIQQSIAQGNWQRADAQLSQVIDAYPDNARARYLYGQVLDREGRPAEALAQIE RAKSLDPQLRFTDPSRFAQTEARVRADARRATSAQSSRSATSGGMLVAPQTQGQAQSQFAAAPAAPAHRGPSAGMWIGFA VLIGAIVLVLRRTLRRARSADDQRAGDERRAQLKRATDVLNDVRPLKLDARLSTAPGAGALNGEIEALEAQARELVETLS NGQNPVPPYRLDELEKQFASLKARVEGRPDPGAASAAANAPGQTGSVFAQEADRLTGAQGQPPYSPYPPQPQQQPPVVIQ QGGGFGGGMGGLLTGVLLGQAMSNGRDRVIEREVIVDDEARRRAGADPGIDFGQGDSWDSGGSDGGGIDLGSSGDDWSNN G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42151; Mature: 42151
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLAAVGLSLILVSAAANAAVPSLQQIQQSIAQGNWQRADAQLSQVIDAYPDNARARY CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH LYGQVLDREGRPAEALAQIERAKSLDPQLRFTDPSRFAQTEARVRADARRATSAQSSRSA HHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC TSGGMLVAPQTQGQAQSQFAAAPAAPAHRGPSAGMWIGFAVLIGAIVLVLRRTLRRARSA CCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DDQRAGDERRAQLKRATDVLNDVRPLKLDARLSTAPGAGALNGEIEALEAQARELVETLS CHHHCCHHHHHHHHHHHHHHHCCCCEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH NGQNPVPPYRLDELEKQFASLKARVEGRPDPGAASAAANAPGQTGSVFAQEADRLTGAQG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCC QPPYSPYPPQPQQQPPVVIQQGGGFGGGMGGLLTGVLLGQAMSNGRDRVIEREVIVDDEA CCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH RRRAGADPGIDFGQGDSWDSGGSDGGGIDLGSSGDDWSNNG HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKLLAAVGLSLILVSAAANAAVPSLQQIQQSIAQGNWQRADAQLSQVIDAYPDNARARY CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH LYGQVLDREGRPAEALAQIERAKSLDPQLRFTDPSRFAQTEARVRADARRATSAQSSRSA HHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC TSGGMLVAPQTQGQAQSQFAAAPAAPAHRGPSAGMWIGFAVLIGAIVLVLRRTLRRARSA CCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DDQRAGDERRAQLKRATDVLNDVRPLKLDARLSTAPGAGALNGEIEALEAQARELVETLS CHHHCCHHHHHHHHHHHHHHHCCCCEEECCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH NGQNPVPPYRLDELEKQFASLKARVEGRPDPGAASAAANAPGQTGSVFAQEADRLTGAQG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCC QPPYSPYPPQPQQQPPVVIQQGGGFGGGMGGLLTGVLLGQAMSNGRDRVIEREVIVDDEA CCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH RRRAGADPGIDFGQGDSWDSGGSDGGGIDLGSSGDDWSNNG HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA