Click here to switch to the map view.

The map label for this gene is 83719582

Identifier: 83719582

GI number: 83719582

Start: 2355884

End: 2356564

Strand: Reverse

Name: 83719582

Synonym: BTH_I2081

Alternate gene names: NA

Gene position: 2356564-2355884 (Counterclockwise)

Preceding gene: 83721374

Following gene: 83721025

Centisome position: 61.87

GC content: 67.11

Gene sequence:

>681_bases
ATGTCGCTTTTCGACTCTATTTCGCGCACGATCAAAGGTCTGCTGAACGATGCGGCGGACTCGGTGCAGGATCCGTCGCG
CGACGCGCGACAGATCGTGCGGGAGCTCGACGACAGCATCGGCCGCGCGGAAAACTCGCTGATCGAGATCGAAGCGCAGG
TCGCGACGCAACGCAGCAAGCGCGACACCGCCGACGAGCGCGCGAAGAAGTATGAGGACGGCGCGAAGCGCGCGCTGCAA
TCGGGCGACGAAGCCCTTGCGCGCGAAGCGCTCGCCGCGCAGGCGAACGCCGAGGCCGAGCGCGACGCGCTCGCGCGCGA
GCTCGACACGCTCGAGCCGTCGGTCGACAAGCTCAAAGGCCAGATCGCCGACATGCGTGCGCGCCGCAACGACCTGAACG
CGCGCTCGAACATCCTGCAGGCGAAGCAGGAAATCGCGCAGGCGAAGGACGTCGCGGCCACCGCGCTCGGCGGGATCGGC
GGCAAGAACCTGTCCGAGGATTTCCAGAAGCTCGAGGACAAGGTCGCGCTGTCGAACGCGCGCTCGGATGCGCGCCTGAA
CTCGGCCGACACGAACAGCGGCCGCGCGCTCGACGACAAGCTCGCGGCGCTGAACAAGGGCCCGTCCGTCGAGGACCGCC
TCGAAGCGCTGAAAAAGCAACTGAACACGCCGGCCCAATAA

Upstream 100 bases:

>100_bases
AAGCGAACCGGTGGTGTAATATCCGCCGACGCAGCGCGCCCGCGCCGCGGCGAAGCGTCGCCCACGGTACGCGCATCGTT
CATCACTTACGGAGGAATCC

Downstream 100 bases:

>100_bases
CGGCGGCTCCGCCAGCCGGCGCTTCGCGGCGCGGCGGCGCGGGCGCGCTCGCTTCGCCCCACCGTCGCGCCGCGAACATC
CGCAAGGAGACGGGCCGAGC

Product: PspA/IM30 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSKRDTADERAKKYEDGAKRALQ
SGDEALAREALAAQANAEAERDALARELDTLEPSVDKLKGQIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIG
GKNLSEDFQKLEDKVALSNARSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ

Sequences:

>Translated_226_residues
MSLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSKRDTADERAKKYEDGAKRALQ
SGDEALAREALAAQANAEAERDALARELDTLEPSVDKLKGQIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIG
GKNLSEDFQKLEDKVALSNARSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ
>Mature_225_residues
SLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSKRDTADERAKKYEDGAKRALQS
GDEALAREALAAQANAEAERDALARELDTLEPSVDKLKGQIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIGG
KNLSEDFQKLEDKVALSNARSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 24464; Mature: 24333

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSK
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDTADERAKKYEDGAKRALQSGDEALAREALAAQANAEAERDALARELDTLEPSVDKLKG
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH
QIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIGGKNLSEDFQKLEDKVALSNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
RSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ
HHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLFDSISRTIKGLLNDAADSVQDPSRDARQIVRELDDSIGRAENSLIEIEAQVATQRSK
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDTADERAKKYEDGAKRALQSGDEALAREALAAQANAEAERDALARELDTLEPSVDKLKG
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH
QIADMRARRNDLNARSNILQAKQEIAQAKDVAATALGGIGGKNLSEDFQKLEDKVALSNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
RSDARLNSADTNSGRALDDKLAALNKGPSVEDRLEALKKQLNTPAQ
HHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]