| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yngK [H]
Identifier: 83720951
GI number: 83720951
Start: 2720796
End: 2722451
Strand: Direct
Name: yngK [H]
Synonym: BTH_I2393
Alternate gene names: 83720951
Gene position: 2720796-2722451 (Clockwise)
Preceding gene: 83718476
Following gene: 83720290
Centisome position: 71.43
GC content: 69.57
Gene sequence:
>1656_bases GTGCCGCCCGGTCCGGAACTCGCTTCGAGCGTCGAGGTCCCTATGGAATCTCTTCATCTGAACGCGCCGACGCGATCCAA GGACCTGCCCATGCTGTCGACCCGCCTTCGTCAACTCGCCGCAGCCGCGCTCGTGCTGTCGGCCAGCGCGTGCGCGGCTT CGCCGGACGCGGAGCGCGAAGTCGCGTGCCGGCCGGACGAGACGATGCCCAAGCGCCAGTTTCGCGGCACGTGGATCGCG TCGGTGGCCAACATCGACTGGCCGTCCCGCGCGGGCCTTCCGGCCGCGGACCAGCAGGCCGAGCTGAGCGCGTGGCTCGA CGACGCGGTGCGCATGAACCGCAACGCGGTGATCCTGCAGGTTCGCCCGACCGCGGACGCGTTCTGGCCATCGCCGTTCG AGCCGTGGTCGGAATACCTGACGGGCACGCAAGGCGGCGACCCCGGCTACGATCCGCTCGCATACGCCGTCGCCGAAGCG CACCGGCGCAATCTCGAGCTGCACGCGTGGTTCAATCCGTATCGCGTCGCGATGGACGAGCGGGTCGACGCGCTTGCGGC CACGCACCCGGCGCGCCTTCATCCGGACTGGATCGTCCGCTACGGCGGCAAGCTGTATTACAACCCGGGCGTGCCGGCCG CGCGCGCGTTCGTCGTCGATGCGATCCTGGACGCGGTCGGCCGCTACGACATCGACGGCGTGCATCTGGACGATTATTTC TATCCGTATCCGGTCGCGGGCGCGGCGTTCGACGATGCGTCCGCATACGCGCAATACGGCGCGGGCTTCGCGACGCTCGC CGACTGGCGCCGCGACAATGTCGATCGCCTCGTCGAGTCGCTCGCGCGGCGCATCAAGGCCGCGAAGCCGTGGGTGAAGT TCGGGGTCTCCCCGTTCGCGGTCTGGCGCAATGCGGCGACCGACCCGCAAGGCTCGCAGACGTCGGCTTCGGTGCAGACC TACGACGACCTGTACGCGGACACGCGCCGCTGGCTGCGCGAGCGCTGGATCGACTACATCGTTCCGCAGGCGTACTGGGC GCGAGGCTTCGCGCCCGCCGACTACGACAAGGTCGTGTCGTGGTGGGCGAACGAGGCGCGCGGGCGCGACGTGCACCTGT ACATCGGGCAGGCGGCCTACAAGGTCGGCACGTCGAATCAATCGCCCGGCTGGTCCGATCCGGACGAATTGAGCAGCCAT CTGGCGTTCAATCGCACCGCGCCCGAGGTGAAGGGCGACGTCTACTTTTCCGCGAAGGACGAGCGCGCGGACCGGCTCGG CGCGACGACGCGCGTGAACCGCACCTGGTACTCGCGCCCGGCGCTCGTGCCGGCGATGCCTGCGCTCGGCGGATCAGCGC CGCCGCCCGCGCGGAATCTGCATGCGCAGCGCACGCCCGACGGCGTGCGCCTGCGATGGAAGCCGCGCTCGAATGCGGCG ACGTCGTACGCGATCTACCGACACGAACCGGGGCGGCAAGACATGTGCAGCGACCACGACGCGCGCCATCTGCTCGCGAC CGTTCGGACAACGGAGTTCGTCGATATCGCCGCGCGCGCGGATCGCGACTACCGGTACGCGGTCACGGCGCTCGATCGCC TCTGGAACGAGAGCGAGCCGGTTGACGTCACGCTGCCTGCGGCGCACCCGCATTGA
Upstream 100 bases:
>100_bases TCATGGCCGCGGTGTGCGTCGTGATGGCGGCAATGGCCGCGCGCCTCGCGCCGCCGCGGCTCACCGTCGCGCGAAGCGGC GCATGAGCGGCGGCGCTCGC
Downstream 100 bases:
>100_bases CGATCCGAGCGCGCCCCCGATGCCCTTGCCTATCGCGCGCTCATCCGAACACCCGGCGCGCGGCACGCGCGTGCCGCGCC TCGGCCTTCACCCCTTCGCG
Product: fenI protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MPPGPELASSVEVPMESLHLNAPTRSKDLPMLSTRLRQLAAAALVLSASACAASPDAEREVACRPDETMPKRQFRGTWIA SVANIDWPSRAGLPAADQQAELSAWLDDAVRMNRNAVILQVRPTADAFWPSPFEPWSEYLTGTQGGDPGYDPLAYAVAEA HRRNLELHAWFNPYRVAMDERVDALAATHPARLHPDWIVRYGGKLYYNPGVPAARAFVVDAILDAVGRYDIDGVHLDDYF YPYPVAGAAFDDASAYAQYGAGFATLADWRRDNVDRLVESLARRIKAAKPWVKFGVSPFAVWRNAATDPQGSQTSASVQT YDDLYADTRRWLRERWIDYIVPQAYWARGFAPADYDKVVSWWANEARGRDVHLYIGQAAYKVGTSNQSPGWSDPDELSSH LAFNRTAPEVKGDVYFSAKDERADRLGATTRVNRTWYSRPALVPAMPALGGSAPPPARNLHAQRTPDGVRLRWKPRSNAA TSYAIYRHEPGRQDMCSDHDARHLLATVRTTEFVDIAARADRDYRYAVTALDRLWNESEPVDVTLPAAHPH
Sequences:
>Translated_551_residues MPPGPELASSVEVPMESLHLNAPTRSKDLPMLSTRLRQLAAAALVLSASACAASPDAEREVACRPDETMPKRQFRGTWIA SVANIDWPSRAGLPAADQQAELSAWLDDAVRMNRNAVILQVRPTADAFWPSPFEPWSEYLTGTQGGDPGYDPLAYAVAEA HRRNLELHAWFNPYRVAMDERVDALAATHPARLHPDWIVRYGGKLYYNPGVPAARAFVVDAILDAVGRYDIDGVHLDDYF YPYPVAGAAFDDASAYAQYGAGFATLADWRRDNVDRLVESLARRIKAAKPWVKFGVSPFAVWRNAATDPQGSQTSASVQT YDDLYADTRRWLRERWIDYIVPQAYWARGFAPADYDKVVSWWANEARGRDVHLYIGQAAYKVGTSNQSPGWSDPDELSSH LAFNRTAPEVKGDVYFSAKDERADRLGATTRVNRTWYSRPALVPAMPALGGSAPPPARNLHAQRTPDGVRLRWKPRSNAA TSYAIYRHEPGRQDMCSDHDARHLLATVRTTEFVDIAARADRDYRYAVTALDRLWNESEPVDVTLPAAHPH >Mature_550_residues PPGPELASSVEVPMESLHLNAPTRSKDLPMLSTRLRQLAAAALVLSASACAASPDAEREVACRPDETMPKRQFRGTWIAS VANIDWPSRAGLPAADQQAELSAWLDDAVRMNRNAVILQVRPTADAFWPSPFEPWSEYLTGTQGGDPGYDPLAYAVAEAH RRNLELHAWFNPYRVAMDERVDALAATHPARLHPDWIVRYGGKLYYNPGVPAARAFVVDAILDAVGRYDIDGVHLDDYFY PYPVAGAAFDDASAYAQYGAGFATLADWRRDNVDRLVESLARRIKAAKPWVKFGVSPFAVWRNAATDPQGSQTSASVQTY DDLYADTRRWLRERWIDYIVPQAYWARGFAPADYDKVVSWWANEARGRDVHLYIGQAAYKVGTSNQSPGWSDPDELSSHL AFNRTAPEVKGDVYFSAKDERADRLGATTRVNRTWYSRPALVPAMPALGGSAPPPARNLHAQRTPDGVRLRWKPRSNAAT SYAIYRHEPGRQDMCSDHDARHLLATVRTTEFVDIAARADRDYRYAVTALDRLWNESEPVDVTLPAAHPH
Specific function: Unknown
COG id: COG1649
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Attached to the membrane by a lipid anchor (Potential) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0748 family [H]
Homologues:
Organism=Escherichia coli, GI1787767, Length=363, Percent_Identity=39.3939393939394, Blast_Score=278, Evalue=5e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003790 - InterPro: IPR017853 [H]
Pfam domain/function: PF02638 DUF187 [H]
EC number: NA
Molecular weight: Translated: 61444; Mature: 61313
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPGPELASSVEVPMESLHLNAPTRSKDLPMLSTRLRQLAAAALVLSASACAASPDAERE CCCCCCCHHHHCCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VACRPDETMPKRQFRGTWIASVANIDWPSRAGLPAADQQAELSAWLDDAVRMNRNAVILQ CCCCCCCCCCHHHHCCCCEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE VRPTADAFWPSPFEPWSEYLTGTQGGDPGYDPLAYAVAEAHRRNLELHAWFNPYRVAMDE EECCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHH RVDALAATHPARLHPDWIVRYGGKLYYNPGVPAARAFVVDAILDAVGRYDIDGVHLDDYF HHHHHHHCCCCCCCCCHHEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCC YPYPVAGAAFDDASAYAQYGAGFATLADWRRDNVDRLVESLARRIKAAKPWVKFGVSPFA CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCHHH VWRNAATDPQGSQTSASVQTYDDLYADTRRWLRERWIDYIVPQAYWARGFAPADYDKVVS HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHH WWANEARGRDVHLYIGQAAYKVGTSNQSPGWSDPDELSSHLAFNRTAPEVKGDVYFSAKD HHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCH ERADRLGATTRVNRTWYSRPALVPAMPALGGSAPPPARNLHAQRTPDGVRLRWKPRSNAA HHHHHCCCCEEECCHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC TSYAIYRHEPGRQDMCSDHDARHLLATVRTTEFVDIAARADRDYRYAVTALDRLWNESEP CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC VDVTLPAAHPH EEEEECCCCCC >Mature Secondary Structure PPGPELASSVEVPMESLHLNAPTRSKDLPMLSTRLRQLAAAALVLSASACAASPDAERE CCCCCCHHHHCCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VACRPDETMPKRQFRGTWIASVANIDWPSRAGLPAADQQAELSAWLDDAVRMNRNAVILQ CCCCCCCCCCHHHHCCCCEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE VRPTADAFWPSPFEPWSEYLTGTQGGDPGYDPLAYAVAEAHRRNLELHAWFNPYRVAMDE EECCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHH RVDALAATHPARLHPDWIVRYGGKLYYNPGVPAARAFVVDAILDAVGRYDIDGVHLDDYF HHHHHHHCCCCCCCCCHHEEECCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCC YPYPVAGAAFDDASAYAQYGAGFATLADWRRDNVDRLVESLARRIKAAKPWVKFGVSPFA CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCHHH VWRNAATDPQGSQTSASVQTYDDLYADTRRWLRERWIDYIVPQAYWARGFAPADYDKVVS HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHH WWANEARGRDVHLYIGQAAYKVGTSNQSPGWSDPDELSSHLAFNRTAPEVKGDVYFSAKD HHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCH ERADRLGATTRVNRTWYSRPALVPAMPALGGSAPPPARNLHAQRTPDGVRLRWKPRSNAA HHHHHCCCCEEECCHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC TSYAIYRHEPGRQDMCSDHDARHLLATVRTTEFVDIAARADRDYRYAVTALDRLWNESEP CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC VDVTLPAAHPH EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387222; 9384377 [H]