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The map label for this gene is nirA [H]

Identifier: 83720290

GI number: 83720290

Start: 2726984

End: 2728423

Strand: Direct

Name: nirA [H]

Synonym: BTH_I2398

Alternate gene names: 83720290

Gene position: 2726984-2728423 (Clockwise)

Preceding gene: 83720951

Following gene: 83721244

Centisome position: 71.59

GC content: 76.81

Gene sequence:

>1440_bases
TTGAGTCCTTCCGCCGCTGTTTTTTCATCTGACGCCGCGCGCGCCGCGAGCGCGTGTCCGGGGCTCGTGCGCATCGTCGC
GGCGCGCGACGGCGGCCTGTGCCGGATCAAGCTGCCGGGCGGCGCGCTCGGCGCCGCGCAGGCGCGCGCGGTGGCCGCCG
CCGCGCGTGCATTCGGCTCGGGCGTGATCGAGGCCACCAATCGCGCGAACCTGCAATTGCGCGGCGTGCGGGCCGGCAGC
GAGGCTTGCGTGAGCCGCGCGCTGATCGACGCGGGGCTCGGGCCGCTGATGGACGGCCCGGGCGCGGCGTCGCTCGACGC
CTGCGTCGCCGCGCGCGACGACGTGCGCAACGTGATGCTGAGCCCGATGGCCGGGCGCGACCCCGATACGCTCGTCGACA
GCGCCGCGCTCGCCGCCCGCCTCCTCACGATGCTGCAGACCGAGCCGCGCTGCGCCGCGCTGTCGCCGAAATTCTCGGTG
CTGCTCGACGGCGGCGAACGGCTCGCCGCGCTCGACCATCCGCACGACATCTGGCTGTCCGCGCTGCGCGACGCGCGCGG
CGACACCCGGCTCGCGATCGGGCTCGCCGGCTGCCCGCCCGCCGACGGCGAGCCGGTCATGCCGAGCGCGCCGCGTACCG
GCGCGCTCGCGACCATCGCGCCGGCGCAGGCCGTCGAGTGCGTGCGCGCGCTCGTGACGAGCTTCGTCGAGCTCGCGCCG
GCGGGTGCCACGCGCATGCGCGACCTGCTCGCGACGTGCCCGCCCGACGCGTTCCTTTCGCACGTGGAATCGAAGCTGTC
CGAATCGCAGCCGCCGTTCGCGCTGCGCCGCGATGCGGATCTCGCCGGCTGGCGGCGCGCGCGCGTCGACGCGACGCTGC
GTTTCGGCATCCGCCCCGAGCGCGACCCGGCGCGCTGCGCCGTCGGCGCGCAACCGCCGCTCGGCCGGCTCGACGCGAAC
GCGCTCGCGGCGCTCGCGGCGCTCGCCGACTCGCACGGCGACGGCACGCTGCGAATCACGCCTTGGCAAGGCGTGATGCT
GCCCGCCGTCGCGCGCGCGGCCGCGCCCGACGCGCTCGCGCGCCTGGCCGCGCTCGGCTTCGTGTGCGACGCGTGCGCGC
CGCTCGCGCACGTCGTCGCATGCGCGGGCTCGACGGGCTGCGCGCGCTCGCCCGCCGATACGAAAACCGACGCGCTCGCG
CTCGCCGCGCGCCTCGCCGCCCCCGTCGACGTGCACGTGACGGGCTGCGCGCGCTCATGCGCATTGCCGCATCCGGCCGC
GCACACGCTCGTCGCGAGCGCGGCCGGCCGCTACGACCTCTACCGGCGCGACGGCGCGACGGGCTTCGGCCTAGCCGTCG
CGCGCCAACTGACGATCGACCAGGCCGCCGCCGCGCTCGCGCGCGACGCGCGGCCCACTCAGGATGACCTCGATGCTTGA

Upstream 100 bases:

>100_bases
ATCGGGCGGGGTGTACCGATGCCGTAGCCCGCCGCCCGCGCGCTTGCCGCGCGGGATCGGCCGTCTCGGGCCGCCGCGCG
ACGCTTGATCCGGAGCGCTG

Downstream 100 bases:

>100_bases
CTACCTTCGCGACGGCTGCGCGATCTACCGCGAATCGTTCGCGACGATCCGCTCGGAAGCCGATCTGACGGGCGTGCCGC
CCGACCTCGAAAAACTCGCG

Product: nitrite/sulfite reductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MSPSAAVFSSDAARAASACPGLVRIVAARDGGLCRIKLPGGALGAAQARAVAAAARAFGSGVIEATNRANLQLRGVRAGS
EACVSRALIDAGLGPLMDGPGAASLDACVAARDDVRNVMLSPMAGRDPDTLVDSAALAARLLTMLQTEPRCAALSPKFSV
LLDGGERLAALDHPHDIWLSALRDARGDTRLAIGLAGCPPADGEPVMPSAPRTGALATIAPAQAVECVRALVTSFVELAP
AGATRMRDLLATCPPDAFLSHVESKLSESQPPFALRRDADLAGWRRARVDATLRFGIRPERDPARCAVGAQPPLGRLDAN
ALAALAALADSHGDGTLRITPWQGVMLPAVARAAAPDALARLAALGFVCDACAPLAHVVACAGSTGCARSPADTKTDALA
LAARLAAPVDVHVTGCARSCALPHPAAHTLVASAAGRYDLYRRDGATGFGLAVARQLTIDQAAAALARDARPTQDDLDA

Sequences:

>Translated_479_residues
MSPSAAVFSSDAARAASACPGLVRIVAARDGGLCRIKLPGGALGAAQARAVAAAARAFGSGVIEATNRANLQLRGVRAGS
EACVSRALIDAGLGPLMDGPGAASLDACVAARDDVRNVMLSPMAGRDPDTLVDSAALAARLLTMLQTEPRCAALSPKFSV
LLDGGERLAALDHPHDIWLSALRDARGDTRLAIGLAGCPPADGEPVMPSAPRTGALATIAPAQAVECVRALVTSFVELAP
AGATRMRDLLATCPPDAFLSHVESKLSESQPPFALRRDADLAGWRRARVDATLRFGIRPERDPARCAVGAQPPLGRLDAN
ALAALAALADSHGDGTLRITPWQGVMLPAVARAAAPDALARLAALGFVCDACAPLAHVVACAGSTGCARSPADTKTDALA
LAARLAAPVDVHVTGCARSCALPHPAAHTLVASAAGRYDLYRRDGATGFGLAVARQLTIDQAAAALARDARPTQDDLDA
>Mature_478_residues
SPSAAVFSSDAARAASACPGLVRIVAARDGGLCRIKLPGGALGAAQARAVAAAARAFGSGVIEATNRANLQLRGVRAGSE
ACVSRALIDAGLGPLMDGPGAASLDACVAARDDVRNVMLSPMAGRDPDTLVDSAALAARLLTMLQTEPRCAALSPKFSVL
LDGGERLAALDHPHDIWLSALRDARGDTRLAIGLAGCPPADGEPVMPSAPRTGALATIAPAQAVECVRALVTSFVELAPA
GATRMRDLLATCPPDAFLSHVESKLSESQPPFALRRDADLAGWRRARVDATLRFGIRPERDPARCAVGAQPPLGRLDANA
LAALAALADSHGDGTLRITPWQGVMLPAVARAAAPDALARLAALGFVCDACAPLAHVVACAGSTGCARSPADTKTDALAL
AARLAAPVDVHVTGCARSCALPHPAAHTLVASAAGRYDLYRRDGATGFGLAVARQLTIDQAAAALARDARPTQDDLDA

Specific function: Unknown

COG id: COG0155

COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005117
- InterPro:   IPR006067
- InterPro:   IPR006066 [H]

Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: =1.7.7.1 [H]

Molecular weight: Translated: 48781; Mature: 48650

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSAAVFSSDAARAASACPGLVRIVAARDGGLCRIKLPGGALGAAQARAVAAAARAFGS
CCCCCCHHCCHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
GVIEATNRANLQLRGVRAGSEACVSRALIDAGLGPLMDGPGAASLDACVAARDDVRNVML
CCEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SPMAGRDPDTLVDSAALAARLLTMLQTEPRCAALSPKFSVLLDGGERLAALDHPHDIWLS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCEEEECCCCHHHHHH
ALRDARGDTRLAIGLAGCPPADGEPVMPSAPRTGALATIAPAQAVECVRALVTSFVELAP
HHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCC
AGATRMRDLLATCPPDAFLSHVESKLSESQPPFALRRDADLAGWRRARVDATLRFGIRPE
CCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCEEEEECCCCC
RDPARCAVGAQPPLGRLDANALAALAALADSHGDGTLRITPWQGVMLPAVARAAAPDALA
CCHHHEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHHH
RLAALGFVCDACAPLAHVVACAGSTGCARSPADTKTDALALAARLAAPVDVHVTGCARSC
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHC
ALPHPAAHTLVASAAGRYDLYRRDGATGFGLAVARQLTIDQAAAALARDARPTQDDLDA
CCCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
SPSAAVFSSDAARAASACPGLVRIVAARDGGLCRIKLPGGALGAAQARAVAAAARAFGS
CCCCCHHCCHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
GVIEATNRANLQLRGVRAGSEACVSRALIDAGLGPLMDGPGAASLDACVAARDDVRNVML
CCEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SPMAGRDPDTLVDSAALAARLLTMLQTEPRCAALSPKFSVLLDGGERLAALDHPHDIWLS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECCCCEEEECCCCHHHHHH
ALRDARGDTRLAIGLAGCPPADGEPVMPSAPRTGALATIAPAQAVECVRALVTSFVELAP
HHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCC
AGATRMRDLLATCPPDAFLSHVESKLSESQPPFALRRDADLAGWRRARVDATLRFGIRPE
CCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCEEEEECCCCC
RDPARCAVGAQPPLGRLDANALAALAALADSHGDGTLRITPWQGVMLPAVARAAAPDALA
CCHHHEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHHH
RLAALGFVCDACAPLAHVVACAGSTGCARSPADTKTDALALAARLAAPVDVHVTGCARSC
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHC
ALPHPAAHTLVASAAGRYDLYRRDGATGFGLAVARQLTIDQAAAALARDARPTQDDLDA
CCCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8490140 [H]