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The map label for this gene is 83720762

Identifier: 83720762

GI number: 83720762

Start: 3243221

End: 3244348

Strand: Direct

Name: 83720762

Synonym: BTH_I2827

Alternate gene names: NA

Gene position: 3243221-3244348 (Clockwise)

Preceding gene: 83719239

Following gene: 83721527

Centisome position: 85.14

GC content: 66.05

Gene sequence:

>1128_bases
ATGAAGAAACCCGTCATCGGCGCGGCTTGCGCCGCCCTGCTCGGCGCAACCGCGACGGCGCACGCGCAAAGCAGCGTCGC
GCTCTACGGCCTGCTCGACGCGAGCATCGCATACACGAACAATCAATCGGGCAAGAGCGCGTGGCAGCAAGGCAGCGGCC
TGCTGTCGAACACCGTGTTCGGCCTGAGCGGCAACGAAGACCTAGGCGGCGCATGGCACGCGCTGTTCCGCCTCGAGAGC
GGAGTCAACGTCAACAACGGTTCGTCTTCCTACAAGAACACCGTATTCGGACGCCGCGCCTATGTCGGCCTGCGACAGGA
CGACTACGGCACGCTGACGTTCGGCCGCCAATACGATTCGGTCGTCGACTGCCTCGGGCCGATCGCGCTCGCGAACAACG
GCGACGGCAACAATCTGGCCGCGCATCCGTTCGACAACGACAACATCGACGATTCGTTCTACATCGACAATGCAGTCAAA
TACGCGAGTCCGACGATCGCCGGCATGCAGCTCGGCGCGGTGTACGGGTTCAGCAACCAGGCGGGCTTTTCGGGCAACCG
CGCGTACAGCGTCGGCCTGTCGTACGGCAACGGGCCGGTCAATCTCGCCGCCGCCTATCTGCAGTTGAATCGCGGCGGCA
CGACGGCGAACGGCGCGCTGTCGACCAACGACGCGCCGAACTTTCCCGCCGCGCGCCAGCGCGTGATGGGCGCGGGCGGC
AGCTATACGTTCGGCCGCGCGACGCTCGGCGCGCTCTGGACGCACACGATGCTCGACGATACCGCCGCCGCTTCGCTGCC
CGGTGCGATGCGCGCGTTGCGGTTCGACAACTACGAGATCAACGCGCGCTACGCACTGACGCCCGCCGTTTCGTTCGCCG
GCGCCTATACGTTCACCGACGGCCGCTACGACGGCGCGGCCACCGGCCGTCCCAAATGGCATCAGGTCACGCTGATGGCC
GATTACGCATTGAGCAAGCGCACGGACGTGTACGCGCAGGGCGTGTACCAGCATCAATTCGGCGTGCCGTCCGATGCCGC
GCTCGGCTTCGCGTCGATCAACGGCCTGGGGGCATCGTCGACGAACACGCAGGTCGCGGCGACGGTCGGAATCCGGCATC
GGTTCTGA

Upstream 100 bases:

>100_bases
ACCGGCAGGCCGTTTCGCACCTCGACACGGCGCACCGGATGCCGGCCGCGCTTGGCAGTCGTCGTTCTCTTTTTTGATCG
AGCCTTTCGAAGATTCCAAC

Downstream 100 bases:

>100_bases
CGTTGCGCCTGCGTCTCCAACGCAGGTTCGGCCGCGCCATGGCGGTCAGGAAGAGGATTCGCCCGATCGCCGGGCGATTC
GGGCGCCGGGCTCGAGCGTT

Product: outer membrane porin OpcP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKKPVIGAACAALLGATATAHAQSSVALYGLLDASIAYTNNQSGKSAWQQGSGLLSNTVFGLSGNEDLGGAWHALFRLES
GVNVNNGSSSYKNTVFGRRAYVGLRQDDYGTLTFGRQYDSVVDCLGPIALANNGDGNNLAAHPFDNDNIDDSFYIDNAVK
YASPTIAGMQLGAVYGFSNQAGFSGNRAYSVGLSYGNGPVNLAAAYLQLNRGGTTANGALSTNDAPNFPAARQRVMGAGG
SYTFGRATLGALWTHTMLDDTAAASLPGAMRALRFDNYEINARYALTPAVSFAGAYTFTDGRYDGAATGRPKWHQVTLMA
DYALSKRTDVYAQGVYQHQFGVPSDAALGFASINGLGASSTNTQVAATVGIRHRF

Sequences:

>Translated_375_residues
MKKPVIGAACAALLGATATAHAQSSVALYGLLDASIAYTNNQSGKSAWQQGSGLLSNTVFGLSGNEDLGGAWHALFRLES
GVNVNNGSSSYKNTVFGRRAYVGLRQDDYGTLTFGRQYDSVVDCLGPIALANNGDGNNLAAHPFDNDNIDDSFYIDNAVK
YASPTIAGMQLGAVYGFSNQAGFSGNRAYSVGLSYGNGPVNLAAAYLQLNRGGTTANGALSTNDAPNFPAARQRVMGAGG
SYTFGRATLGALWTHTMLDDTAAASLPGAMRALRFDNYEINARYALTPAVSFAGAYTFTDGRYDGAATGRPKWHQVTLMA
DYALSKRTDVYAQGVYQHQFGVPSDAALGFASINGLGASSTNTQVAATVGIRHRF
>Mature_375_residues
MKKPVIGAACAALLGATATAHAQSSVALYGLLDASIAYTNNQSGKSAWQQGSGLLSNTVFGLSGNEDLGGAWHALFRLES
GVNVNNGSSSYKNTVFGRRAYVGLRQDDYGTLTFGRQYDSVVDCLGPIALANNGDGNNLAAHPFDNDNIDDSFYIDNAVK
YASPTIAGMQLGAVYGFSNQAGFSGNRAYSVGLSYGNGPVNLAAAYLQLNRGGTTANGALSTNDAPNFPAARQRVMGAGG
SYTFGRATLGALWTHTMLDDTAAASLPGAMRALRFDNYEINARYALTPAVSFAGAYTFTDGRYDGAATGRPKWHQVTLMA
DYALSKRTDVYAQGVYQHQFGVPSDAALGFASINGLGASSTNTQVAATVGIRHRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39282; Mature: 39282

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPVIGAACAALLGATATAHAQSSVALYGLLDASIAYTNNQSGKSAWQQGSGLLSNTVF
CCCCCHHHHHHHHHCCCHHHCCCCCEEEEEEEECEEEEECCCCCHHHHHHCCCCHHHEEE
GLSGNEDLGGAWHALFRLESGVNVNNGSSSYKNTVFGRRAYVGLRQDDYGTLTFGRQYDS
ECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCEEEECCHHHH
VVDCLGPIALANNGDGNNLAAHPFDNDNIDDSFYIDNAVKYASPTIAGMQLGAVYGFSNQ
HHHHHCCEEEECCCCCCCEEECCCCCCCCCCCEEECCCHHHCCCCCCCEEEEEEECCCCC
AGFSGNRAYSVGLSYGNGPVNLAAAYLQLNRGGTTANGALSTNDAPNFPAARQRVMGAGG
CCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCEECCCCCCCCHHHHHHHCCCC
SYTFGRATLGALWTHTMLDDTAAASLPGAMRALRFDNYEINARYALTPAVSFAGAYTFTD
CCEEHHHHHHHHHHHHHHCCHHHHCCCHHHHHHEECCEEEEEEEEECCHHHHCEEEEEEC
GRYDGAATGRPKWHQVTLMADYALSKRTDVYAQGVYQHQFGVPSDAALGFASINGLGASS
CCCCCCCCCCCCEEEEEEEEECHHCCCCCHHHHCEEHHCCCCCCCHHCCEEEECCCCCCC
TNTQVAATVGIRHRF
CCCEEEEEEEEEECC
>Mature Secondary Structure
MKKPVIGAACAALLGATATAHAQSSVALYGLLDASIAYTNNQSGKSAWQQGSGLLSNTVF
CCCCCHHHHHHHHHCCCHHHCCCCCEEEEEEEECEEEEECCCCCHHHHHHCCCCHHHEEE
GLSGNEDLGGAWHALFRLESGVNVNNGSSSYKNTVFGRRAYVGLRQDDYGTLTFGRQYDS
ECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCEEEECCHHHH
VVDCLGPIALANNGDGNNLAAHPFDNDNIDDSFYIDNAVKYASPTIAGMQLGAVYGFSNQ
HHHHHCCEEEECCCCCCCEEECCCCCCCCCCCEEECCCHHHCCCCCCCEEEEEEECCCCC
AGFSGNRAYSVGLSYGNGPVNLAAAYLQLNRGGTTANGALSTNDAPNFPAARQRVMGAGG
CCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCEECCCCCCCCHHHHHHHCCCC
SYTFGRATLGALWTHTMLDDTAAASLPGAMRALRFDNYEINARYALTPAVSFAGAYTFTD
CCEEHHHHHHHHHHHHHHCCHHHHCCCHHHHHHEECCEEEEEEEEECCHHHHCEEEEEEC
GRYDGAATGRPKWHQVTLMADYALSKRTDVYAQGVYQHQFGVPSDAALGFASINGLGASS
CCCCCCCCCCCCEEEEEEEEECHHCCCCCHHHHCEEHHCCCCCCCHHCCEEEECCCCCCC
TNTQVAATVGIRHRF
CCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]