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The map label for this gene is 83720748

Identifier: 83720748

GI number: 83720748

Start: 1135674

End: 1136708

Strand: Reverse

Name: 83720748

Synonym: BTH_I0997

Alternate gene names: NA

Gene position: 1136708-1135674 (Counterclockwise)

Preceding gene: 83718511

Following gene: 83721490

Centisome position: 29.84

GC content: 69.18

Gene sequence:

>1035_bases
GTGCGCAGCCCAAGAGCGGCGGGCTTCGGCTGTCGCGGCGCCCGCTGCTGTCACAAACACGTCGCCTGCTTCGTCTTGAT
CGTTCGAACCGTCAGTTATTCAAGCAGGCCCTCAAGCACGCTTTCGAGCCAACCCGAGAACATGACCGAAACCTCTCGTC
CGACACCGTCCGATGAACCGTTCGCCGCGCTACGCCCGCGCCTCTTCTCGATCGCGTACCGAATGCTCGGCACGCGCGCC
GACGCCGAAGACGTGCTGCAGGACGCCTGGCTGCGCTGGCATCAGGCCGACCGCGACGCGCTCGACTCGCCCGAGGCGTG
GCTCGTCACGGTCGTCACCCGGCTGTCGATCGACCGGCTGCGCGCCGCGAAGGCGCAGCGCGACACCTATGTCGGCTGGT
GGCTCCCCGAGCCGCTCGTCGACGTCGACGAGCGCACGCCCGAGACCGCGGCCGAATTCGCCGACGATCTGTCGGTCGCG
CTGCTGTGGGTGCTCGAACGCCTGTCGCCCGAGGAACGCGCGGCGTTCCTGCTGCGTCAGGCGTTCGAGCGCGACTACGC
GGAAATCGCGCAGTTGCTCGACAAGAGCGAGGCTGCCTGCCGGCAGCTCGTCCACCGCGCGTCGACGCGCGTGCAGCAGG
AACACCGGCGCTTCGACGTATCGCGCGACCGGCACCGGCAACTCGTCGAGCGCTTCGCGCAGGCCTCGGCAAGCGGCGAG
CGCAGCGCGATCCAGGCGCTGCTCGCGGACGACGTCGAGCTCGTCGGCGACGGTGGCGGCAAGGTGCCGTCGTTCTTCAA
GGTGCTGCGCGGCGCGCTCCGGATCGCGAATCTGTACTGGGTCGTCGGCAGACGCCATGCCGGGCGGATCGAGTACCGGC
TCGCGCAGATCAACGGCGAGCCGGGCCTGCTGCGCTTCATCGACGGACAGATCGAATCGGCGCAGGCGTTCGTCACCGAC
GGCGCGCGGATCGTCGCGATCTACGCGGTGCGCAATCCGGACAAGCTCGCGCATATCCCGGCCCGTCACGCGTGA

Upstream 100 bases:

>100_bases
CACGGACAACGCGCCGGCCCCCGAGCCGGCCGCGCCATCGGACGACGACACGCACGCGGCATGAGCGCGCGCGGCATACG
CGAAGCGGCGCGCCGGCACC

Downstream 100 bases:

>100_bases
CGATCCGTGACGCGGCGCGTCGGGCCCCACGTAGGGCGCGGTCTCGCGCGTCACGCCGTGCTTTCGCGCTGCCCGTTGCA
TTGCGTCGCGCTTCGCGGGG

Product: ECF subfamily RNA polymerase sigma factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma-; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma-70 Factor; ECF-Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; ECF Sigma Factor; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase; RNA Polymerase ECF-Type Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; Sigma Factor Protein; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70-Like Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRSPRAAGFGCRGARCCHKHVACFVLIVRTVSYSSRPSSTLSSQPENMTETSRPTPSDEPFAALRPRLFSIAYRMLGTRA
DAEDVLQDAWLRWHQADRDALDSPEAWLVTVVTRLSIDRLRAAKAQRDTYVGWWLPEPLVDVDERTPETAAEFADDLSVA
LLWVLERLSPEERAAFLLRQAFERDYAEIAQLLDKSEAACRQLVHRASTRVQQEHRRFDVSRDRHRQLVERFAQASASGE
RSAIQALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWVVGRRHAGRIEYRLAQINGEPGLLRFIDGQIESAQAFVTD
GARIVAIYAVRNPDKLAHIPARHA

Sequences:

>Translated_344_residues
MRSPRAAGFGCRGARCCHKHVACFVLIVRTVSYSSRPSSTLSSQPENMTETSRPTPSDEPFAALRPRLFSIAYRMLGTRA
DAEDVLQDAWLRWHQADRDALDSPEAWLVTVVTRLSIDRLRAAKAQRDTYVGWWLPEPLVDVDERTPETAAEFADDLSVA
LLWVLERLSPEERAAFLLRQAFERDYAEIAQLLDKSEAACRQLVHRASTRVQQEHRRFDVSRDRHRQLVERFAQASASGE
RSAIQALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWVVGRRHAGRIEYRLAQINGEPGLLRFIDGQIESAQAFVTD
GARIVAIYAVRNPDKLAHIPARHA
>Mature_344_residues
MRSPRAAGFGCRGARCCHKHVACFVLIVRTVSYSSRPSSTLSSQPENMTETSRPTPSDEPFAALRPRLFSIAYRMLGTRA
DAEDVLQDAWLRWHQADRDALDSPEAWLVTVVTRLSIDRLRAAKAQRDTYVGWWLPEPLVDVDERTPETAAEFADDLSVA
LLWVLERLSPEERAAFLLRQAFERDYAEIAQLLDKSEAACRQLVHRASTRVQQEHRRFDVSRDRHRQLVERFAQASASGE
RSAIQALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWVVGRRHAGRIEYRLAQINGEPGLLRFIDGQIESAQAFVTD
GARIVAIYAVRNPDKLAHIPARHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38722; Mature: 38722

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00118 PA2_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPRAAGFGCRGARCCHKHVACFVLIVRTVSYSSRPSSTLSSQPENMTETSRPTPSDEP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
FAALRPRLFSIAYRMLGTRADAEDVLQDAWLRWHQADRDALDSPEAWLVTVVTRLSIDRL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHH
RAAKAQRDTYVGWWLPEPLVDVDERTPETAAEFADDLSVALLWVLERLSPEERAAFLLRQ
HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AFERDYAEIAQLLDKSEAACRQLVHRASTRVQQEHRRFDVSRDRHRQLVERFAQASASGE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH
RSAIQALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWVVGRRHAGRIEYRLAQINGE
HHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
PGLLRFIDGQIESAQAFVTDGARIVAIYAVRNPDKLAHIPARHA
CCEEEEECCCHHHHHHHHCCCCEEEEEEEECCCCHHHCCCCCCC
>Mature Secondary Structure
MRSPRAAGFGCRGARCCHKHVACFVLIVRTVSYSSRPSSTLSSQPENMTETSRPTPSDEP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
FAALRPRLFSIAYRMLGTRADAEDVLQDAWLRWHQADRDALDSPEAWLVTVVTRLSIDRL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHH
RAAKAQRDTYVGWWLPEPLVDVDERTPETAAEFADDLSVALLWVLERLSPEERAAFLLRQ
HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
AFERDYAEIAQLLDKSEAACRQLVHRASTRVQQEHRRFDVSRDRHRQLVERFAQASASGE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH
RSAIQALLADDVELVGDGGGKVPSFFKVLRGALRIANLYWVVGRRHAGRIEYRLAQINGE
HHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
PGLLRFIDGQIESAQAFVTDGARIVAIYAVRNPDKLAHIPARHA
CCEEEEECCCHHHHHHHHCCCCEEEEEEEECCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA