| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720668
Identifier: 83720668
GI number: 83720668
Start: 60233
End: 61411
Strand: Direct
Name: 83720668
Synonym: BTH_I0056
Alternate gene names: NA
Gene position: 60233-61411 (Clockwise)
Preceding gene: 83720084
Following gene: 83721003
Centisome position: 1.58
GC content: 70.23
Gene sequence:
>1179_bases ATGAAGCAGGACGCATTCATCCAGCGGTTGCGGCAGGCGCTCGGCAGCCTGCCGAAGCGGGACGTCGACGAGATCGTCGC CGACTACCGCGAGTACATCGGCGACGCGCTCTCGGCCGGGCGCGCGGAGGAAGACGTGATCGCCGCGCTCGGCGATCCGG AGAAGCTCGCGCGCGAGCTGAAGGCGCAGGCGAATTTCCGGCAATGGGAGGAGCGGCGCTCGTTCGGCAATCTGATGCGC GTCGTCGGCTCGATCGCGGGCCTCGGGCTGCTGCACCTGATCCTGCTCGTGCCGTTTCTGCTGTACATGCTCGTGCTGAC GACCGGCTACGTGTTCTTCGGCGCGCTGACGGTGGCCGGGCTCGTCACGCTCGTCGCATTCGGCAGCCATTACGTGTTCG GCACGCCGGTGCCGGGCGTCCTGCCGTTCGGCGGCGGCGCGGCGCAGGTCGGCGTGGCCGGCGCGGCGGACGGCAAGGGC GCGGCGGCGGGCAAGGACGCGCAGGGCGGCAAGGACGCGAAGAATTCGAAGAGCGCGAGCGCCGCGGCCGCCGATGCGCT GAACGACGCGAAGGAACTGCGCGTCGACGGCGAGCGCTACGTGCTCGACCTGCACGACGGCAGCCGGGTGTCGATCGTCA CGCGCAAGGGCGTGATCGATGCGCGCAAGCAGGACGGCAAGCTTTCGGTCGACGCGACCGGCGACGGCGCGCGCGCGCTG CTCGCGACGGGCAGCGACGGCACGTTCAACATCGCGCGCGCCGACGTGATCGCGCTCGATCTGAAGAGCGCGAGCGGCGA TCAGATGACGGTCGCGAACACGGGCGCGTCGATGCCGGGCGTGAACGTGCCAGGCATCGCAGGCGGCAACGTGCAGATGA CGCCGGACGGCCGCGGCGGCATGAACCTGTCGGTGACGAATGGCGAGAACGCGGTATCGATCGTCGGCGGCCGGATCACC GTCGACAACGGCAAGCAGCACGTGAGCGTCGCCGCGCCGACCGGGTTCGCGCTCGGCGGCATCGCGTTCGGCTACGGGCT TGCGATGCTGCCGATCGGGATCGTCGGGCTGCTCGTGTGCATCTGGTTGACGCGCGTTACGTGGCGCGCGCTCGTGCGGT ATGTGCGGCGGCGGATCGATGCGGTGTCGGCGAAGCTCGAGCGGGAACGGGGGAGCTGA
Upstream 100 bases:
>100_bases CGAGCCTGCGGCAGATGGAAAACGAGTGGCGGAGTTTCGTCGACGAAGTCAACGGCGTGCTGGCGCTGCACCGCACGCAA GCGGACGGAGAGGAACGGCA
Downstream 100 bases:
>100_bases GATTCGGCGGTTCCGTCGAGCTTGGGTTTGGGGAGATTCAAAAGCGCTCGGGCGATTCCGGGCGCTTTTTTTCTGTGAGG AAAGCGCGGCCAGAAGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRAEEDVIAALGDPEKLARELKAQANFRQWEERRSFGNLMR VVGSIAGLGLLHLILLVPFLLYMLVLTTGYVFFGALTVAGLVTLVAFGSHYVFGTPVPGVLPFGGGAAQVGVAGAADGKG AAAGKDAQGGKDAKNSKSASAAAADALNDAKELRVDGERYVLDLHDGSRVSIVTRKGVIDARKQDGKLSVDATGDGARAL LATGSDGTFNIARADVIALDLKSASGDQMTVANTGASMPGVNVPGIAGGNVQMTPDGRGGMNLSVTNGENAVSIVGGRIT VDNGKQHVSVAAPTGFALGGIAFGYGLAMLPIGIVGLLVCIWLTRVTWRALVRYVRRRIDAVSAKLERERGS
Sequences:
>Translated_392_residues MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRAEEDVIAALGDPEKLARELKAQANFRQWEERRSFGNLMR VVGSIAGLGLLHLILLVPFLLYMLVLTTGYVFFGALTVAGLVTLVAFGSHYVFGTPVPGVLPFGGGAAQVGVAGAADGKG AAAGKDAQGGKDAKNSKSASAAAADALNDAKELRVDGERYVLDLHDGSRVSIVTRKGVIDARKQDGKLSVDATGDGARAL LATGSDGTFNIARADVIALDLKSASGDQMTVANTGASMPGVNVPGIAGGNVQMTPDGRGGMNLSVTNGENAVSIVGGRIT VDNGKQHVSVAAPTGFALGGIAFGYGLAMLPIGIVGLLVCIWLTRVTWRALVRYVRRRIDAVSAKLERERGS >Mature_392_residues MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRAEEDVIAALGDPEKLARELKAQANFRQWEERRSFGNLMR VVGSIAGLGLLHLILLVPFLLYMLVLTTGYVFFGALTVAGLVTLVAFGSHYVFGTPVPGVLPFGGGAAQVGVAGAADGKG AAAGKDAQGGKDAKNSKSASAAAADALNDAKELRVDGERYVLDLHDGSRVSIVTRKGVIDARKQDGKLSVDATGDGARAL LATGSDGTFNIARADVIALDLKSASGDQMTVANTGASMPGVNVPGIAGGNVQMTPDGRGGMNLSVTNGENAVSIVGGRIT VDNGKQHVSVAAPTGFALGGIAFGYGLAMLPIGIVGLLVCIWLTRVTWRALVRYVRRRIDAVSAKLERERGS
Specific function: Unknown
COG id: COG4709
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40816; Mature: 40816
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRAEEDVIAALGDPEKLAREL CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH KAQANFRQWEERRSFGNLMRVVGSIAGLGLLHLILLVPFLLYMLVLTTGYVFFGALTVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTLVAFGSHYVFGTPVPGVLPFGGGAAQVGVAGAADGKGAAAGKDAQGGKDAKNSKSAS HHHHHHHCCCEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH AAAADALNDAKELRVDGERYVLDLHDGSRVSIVTRKGVIDARKQDGKLSVDATGDGARAL HHHHHHHHHHHHHEECCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEE LATGSDGTFNIARADVIALDLKSASGDQMTVANTGASMPGVNVPGIAGGNVQMTPDGRGG EEECCCCCEEEEEHEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCC MNLSVTNGENAVSIVGGRITVDNGKQHVSVAAPTGFALGGIAFGYGLAMLPIGIVGLLVC EEEEEECCCCEEEEECCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH IWLTRVTWRALVRYVRRRIDAVSAKLERERGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRAEEDVIAALGDPEKLAREL CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH KAQANFRQWEERRSFGNLMRVVGSIAGLGLLHLILLVPFLLYMLVLTTGYVFFGALTVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVTLVAFGSHYVFGTPVPGVLPFGGGAAQVGVAGAADGKGAAAGKDAQGGKDAKNSKSAS HHHHHHHCCCEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH AAAADALNDAKELRVDGERYVLDLHDGSRVSIVTRKGVIDARKQDGKLSVDATGDGARAL HHHHHHHHHHHHHEECCCEEEEECCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCEEE LATGSDGTFNIARADVIALDLKSASGDQMTVANTGASMPGVNVPGIAGGNVQMTPDGRGG EEECCCCCEEEEEHEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCC MNLSVTNGENAVSIVGGRITVDNGKQHVSVAAPTGFALGGIAFGYGLAMLPIGIVGLLVC EEEEEECCCCEEEEECCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH IWLTRVTWRALVRYVRRRIDAVSAKLERERGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA