Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

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The map label for this gene is yhfK [H]

Identifier: 83720661

GI number: 83720661

Start: 3302302

End: 3302931

Strand: Direct

Name: yhfK [H]

Synonym: BTH_I2869

Alternate gene names: 83720661

Gene position: 3302302-3302931 (Clockwise)

Preceding gene: 83721112

Following gene: 83718429

Centisome position: 86.69

GC content: 68.57

Gene sequence:

>630_bases
ATGTCGATGAAGGTACTGCTGATTGGCGCGTCCGGCCGCACGGGCCGCGCGCTCGCGGACCTGCTGCTCGAGCAGCAGGA
TTTCGAGGTCACGGCGCTCGTGCGCCGGCCGGATTTTGCGCTGCCGGGCGCGAAAGTCGTCGTTGCCGACCTGACCGGCG
ATTTCTCGTCCGCGTTCCGCGGCATCACGCACGCGATCTACGCGGCGGGCTCCGCCGAATCGGAAGGCGCGACCGAAGAG
GAACAGGTGGACCGCGACGCCGTCGCGCGCTCGGCCGACTACGCGAAGGCTCACAACGTGCAGAAGCTCGTCGTGATCAG
CTCGCTCACCGCGTACTGGCCGCAGCGCAGCCCAGAGCCCCTGCAGCACTACTCGCAGATGAAGCGCGAAGGCGACGACC
GCGTGATCGCGTCGGGCATCGACTACGTGATCCTGCGCCCGGGCCCGCTCACCGACGATCCTGGGGTCGGCAAGATCGCG
CTCACCGAGGAGCGGCTCGACAACGCGCCGCCCGTCGCGCGTCAGGACGTCGCATGGGCGGCGATCGAGGCGATCAAGCT
CGGCATCTCGAAGAAAACGATCGGCTTCGTCGGCGGCAGCGTGCCGATCGAGCAGGCGCTGCGCGCATAG

Upstream 100 bases:

>100_bases
ATCACCGGTCGAGCGTGAATTCGGCATACACTTGGATGCTCGACGTCAGCCCCTCGCCTGAAGGGCGCCATTGACGCAGC
GCAATGCAAGGAGCGGTTTC

Downstream 100 bases:

>100_bases
GCGCGGCCGCGGCGGGTGGGCCGGCGCCCGCTCGCCGGCGCGGCGCGGCGCGTCGCGCGCGGCGCCGCCTCGCCGCGACA
CGCCGAGATTCGTCGCGATC

Product: YhfK-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFRGITHAIYAAGSAESEGATEE
EQVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEPLQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIA
LTEERLDNAPPVARQDVAWAAIEAIKLGISKKTIGFVGGSVPIEQALRA

Sequences:

>Translated_209_residues
MSMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFRGITHAIYAAGSAESEGATEE
EQVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEPLQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIA
LTEERLDNAPPVARQDVAWAAIEAIKLGISKKTIGFVGGSVPIEQALRA
>Mature_208_residues
SMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFRGITHAIYAAGSAESEGATEEE
QVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEPLQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIAL
TEERLDNAPPVARQDVAWAAIEAIKLGISKKTIGFVGGSVPIEQALRA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323737, Length=226, Percent_Identity=30.0884955752212, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 22395; Mature: 22263

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFR
CCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHH
GITHAIYAAGSAESEGATEEEQVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEP
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHEEHHHHHHHHCCCCCCHH
LQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIALTEERLDNAPPVARQDVAWA
HHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHH
AIEAIKLGISKKTIGFVGGSVPIEQALRA
HHHHHHHCCCCCCCEECCCCCCHHHHHCC
>Mature Secondary Structure 
SMKVLLIGASGRTGRALADLLLEQQDFEVTALVRRPDFALPGAKVVVADLTGDFSSAFR
CEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHH
GITHAIYAAGSAESEGATEEEQVDRDAVARSADYAKAHNVQKLVVISSLTAYWPQRSPEP
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCHHEEHHHHHHHHCCCCCCHH
LQHYSQMKREGDDRVIASGIDYVILRPGPLTDDPGVGKIALTEERLDNAPPVARQDVAWA
HHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEEHHHCCCCCCCCHHHHHHH
AIEAIKLGISKKTIGFVGGSVPIEQALRA
HHHHHHHCCCCCCCEECCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]