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The map label for this gene is yaaJ [C]

Identifier: 83720579

GI number: 83720579

Start: 3449186

End: 3450697

Strand: Reverse

Name: yaaJ [C]

Synonym: BTH_I3012

Alternate gene names: 83720579

Gene position: 3450697-3449186 (Counterclockwise)

Preceding gene: 83721325

Following gene: 83721341

Centisome position: 90.59

GC content: 67.53

Gene sequence:

>1512_bases
ATGGAAGGCTTTGTGCACACGTTGATCGACGGGATCAACGGCATTCTCTGGAATTACGTGCTGATTGCGCTGCTGCTGGG
CGCCGGCGCGTGGTTCACGCTGCGCTTCAGGATGATCCAGTTGCGTGCGCTGTTTCTCAGCATGCGCCTCGTCGGCAGCA
AGGGCGAACCGGGCAGCATCTCGTCGTTCCAGGCGTTCGCGACCGGGCTCGCGAGCCGCGTCGGCACGGGCAACATCGCG
GGCGTTGCGGTTGCGATGACGGTGGGCGGCCCGGGCGCGATCTTCTGGATGTGGATGACGGCGCTCGTCGGGATGTCGTC
CGCGTTCGTCGAGGCGACGCTCGCGCAAATCTTCAAGGTGTCGCATCATGACGGCACGTATCGCGGCGGTCCCGCCTACT
ACATCCAGATCGGGCTGCGCTCGCGCGGCTTCGGCGTGCTGTTCTCGCTGTCGCTGATCCTCGCGTTCGGCTTCGTGTTC
AACGCGGTGCAGGCGAACGCGATCGCCGAGGCGTTCAACACGTCGTTCGGCGTGAGCCGCGCCGCGGTCGGGCTCGCGCT
CGTCGCGCTGACGGCGCCGATCATCTTCGGCGGCATTCGCCGGATCGCGCACGTCGCGCAGGTGATCGTGCCCGTGATGG
CGATCGGCTACCTCGCGCTCGCGGTCTACGCGGTCGCGACGCACGTAGCGCTCGTGCCGGAGATGATCGTGCTGATCGTG
AAGAGCGCATTCGGCCTCGATCAGGCGGCGGGCGGCCTGACCGGATACGCGGTGAGCCAGGCGGTGTCGATCGGCGTGAA
GCGCGGCCTGTTCTCGAACGAAGCCGGGATGGGCAGCGCGCCGAACGCGGCCGCGACCGCGAGCACGCGGCATCCGGTCA
CGCAGGGGCTGATCCAGATGCTCGGCGTGTTCGTCGACACCATCGTGATCTGCAGCGCGACCGCGTTTGTGATCCTGTTG
TCGGGGCAATACGAGCCGGGCACGTCGATGGAAGGCGCGGCGCTCACGCAGCGCGCGATCTCGAGCCACGTCGGCGACTG
GGGAGGCATCTACATGGCGGTGGCGATCTTCTTCCTTGCGTTTTCTTCAGTGATCGGCAACTACGCGTATGCGGAAGGCA
ACGTCGGATTCGTCACGAGCCGGCGCGGCGCGCTTTTCGTGTTCAGGCTCGCGGTGCTCGGGATGGTGATGTTCGGCAGC
GTCGGGCAACTGCCGCTCGTGTGGGCGATGGCCGATACTAGCATGGGGCTGATGGCGCTCATCAACCTGATCGCGATCCT
GATGCTCGGCAAGTATGCGCATGCCGCGTGGCGCGATTATCAGCGCCAGCGCGCGGCGGGCGTCGCCGATCCGGTGTTCA
CCCGCAAGACGATTCCCGCGCTCGCGAAGGTGCTTCCGGACGACGTGTGGGGCGAGCACGGGCCGCTGCCGCAGGGCGAC
AAGCTCGCGGCGGGGCGCGCGCCGGGTGTCGATGCGGCTCGGGCCGCGGGGCCGGTCGGCTCCGCGCGGTGA

Upstream 100 bases:

>100_bases
CATTTTGTAAGAGTTGGGGCAACCTGTCATATCATGTCGGCCCTCGGCCGGCTATGACCGGAATCAATACATAATCCGAC
CCCAAATCAGGAGATGATGG

Downstream 100 bases:

>100_bases
CGATGGCGGGCGGCCGGTTGCGCTGCTTCGTCGCGCTGACGCTCGATCCGGCGTCGCGCGACGCGCTTGCCGCGCTGCCC
GTCGCCGCCGGCGCGCGCCG

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MEGFVHTLIDGINGILWNYVLIALLLGAGAWFTLRFRMIQLRALFLSMRLVGSKGEPGSISSFQAFATGLASRVGTGNIA
GVAVAMTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKVSHHDGTYRGGPAYYIQIGLRSRGFGVLFSLSLILAFGFVF
NAVQANAIAEAFNTSFGVSRAAVGLALVALTAPIIFGGIRRIAHVAQVIVPVMAIGYLALAVYAVATHVALVPEMIVLIV
KSAFGLDQAAGGLTGYAVSQAVSIGVKRGLFSNEAGMGSAPNAAATASTRHPVTQGLIQMLGVFVDTIVICSATAFVILL
SGQYEPGTSMEGAALTQRAISSHVGDWGGIYMAVAIFFLAFSSVIGNYAYAEGNVGFVTSRRGALFVFRLAVLGMVMFGS
VGQLPLVWAMADTSMGLMALINLIAILMLGKYAHAAWRDYQRQRAAGVADPVFTRKTIPALAKVLPDDVWGEHGPLPQGD
KLAAGRAPGVDAARAAGPVGSAR

Sequences:

>Translated_503_residues
MEGFVHTLIDGINGILWNYVLIALLLGAGAWFTLRFRMIQLRALFLSMRLVGSKGEPGSISSFQAFATGLASRVGTGNIA
GVAVAMTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKVSHHDGTYRGGPAYYIQIGLRSRGFGVLFSLSLILAFGFVF
NAVQANAIAEAFNTSFGVSRAAVGLALVALTAPIIFGGIRRIAHVAQVIVPVMAIGYLALAVYAVATHVALVPEMIVLIV
KSAFGLDQAAGGLTGYAVSQAVSIGVKRGLFSNEAGMGSAPNAAATASTRHPVTQGLIQMLGVFVDTIVICSATAFVILL
SGQYEPGTSMEGAALTQRAISSHVGDWGGIYMAVAIFFLAFSSVIGNYAYAEGNVGFVTSRRGALFVFRLAVLGMVMFGS
VGQLPLVWAMADTSMGLMALINLIAILMLGKYAHAAWRDYQRQRAAGVADPVFTRKTIPALAKVLPDDVWGEHGPLPQGD
KLAAGRAPGVDAARAAGPVGSAR
>Mature_503_residues
MEGFVHTLIDGINGILWNYVLIALLLGAGAWFTLRFRMIQLRALFLSMRLVGSKGEPGSISSFQAFATGLASRVGTGNIA
GVAVAMTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKVSHHDGTYRGGPAYYIQIGLRSRGFGVLFSLSLILAFGFVF
NAVQANAIAEAFNTSFGVSRAAVGLALVALTAPIIFGGIRRIAHVAQVIVPVMAIGYLALAVYAVATHVALVPEMIVLIV
KSAFGLDQAAGGLTGYAVSQAVSIGVKRGLFSNEAGMGSAPNAAATASTRHPVTQGLIQMLGVFVDTIVICSATAFVILL
SGQYEPGTSMEGAALTQRAISSHVGDWGGIYMAVAIFFLAFSSVIGNYAYAEGNVGFVTSRRGALFVFRLAVLGMVMFGS
VGQLPLVWAMADTSMGLMALINLIAILMLGKYAHAAWRDYQRQRAAGVADPVFTRKTIPALAKVLPDDVWGEHGPLPQGD
KLAAGRAPGVDAARAAGPVGSAR

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=470, Percent_Identity=41.9148936170213, Blast_Score=355, Evalue=3e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 52528; Mature: 52528

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGFVHTLIDGINGILWNYVLIALLLGAGAWFTLRFRMIQLRALFLSMRLVGSKGEPGSI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SSFQAFATGLASRVGTGNIAGVAVAMTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKV
HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SHHDGTYRGGPAYYIQIGLRSRGFGVLFSLSLILAFGFVFNAVQANAIAEAFNTSFGVSR
HCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AAVGLALVALTAPIIFGGIRRIAHVAQVIVPVMAIGYLALAVYAVATHVALVPEMIVLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSAFGLDQAAGGLTGYAVSQAVSIGVKRGLFSNEAGMGSAPNAAATASTRHPVTQGLIQM
HHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LGVFVDTIVICSATAFVILLSGQYEPGTSMEGAALTQRAISSHVGDWGGIYMAVAIFFLA
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FSSVIGNYAYAEGNVGFVTSRRGALFVFRLAVLGMVMFGSVGQLPLVWAMADTSMGLMAL
HHHHHCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHH
INLIAILMLGKYAHAAWRDYQRQRAAGVADPVFTRKTIPALAKVLPDDVWGEHGPLPQGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
KLAAGRAPGVDAARAAGPVGSAR
CCCCCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MEGFVHTLIDGINGILWNYVLIALLLGAGAWFTLRFRMIQLRALFLSMRLVGSKGEPGSI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SSFQAFATGLASRVGTGNIAGVAVAMTVGGPGAIFWMWMTALVGMSSAFVEATLAQIFKV
HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SHHDGTYRGGPAYYIQIGLRSRGFGVLFSLSLILAFGFVFNAVQANAIAEAFNTSFGVSR
HCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AAVGLALVALTAPIIFGGIRRIAHVAQVIVPVMAIGYLALAVYAVATHVALVPEMIVLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSAFGLDQAAGGLTGYAVSQAVSIGVKRGLFSNEAGMGSAPNAAATASTRHPVTQGLIQM
HHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LGVFVDTIVICSATAFVILLSGQYEPGTSMEGAALTQRAISSHVGDWGGIYMAVAIFFLA
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FSSVIGNYAYAEGNVGFVTSRRGALFVFRLAVLGMVMFGSVGQLPLVWAMADTSMGLMAL
HHHHHCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHH
INLIAILMLGKYAHAAWRDYQRQRAAGVADPVFTRKTIPALAKVLPDDVWGEHGPLPQGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
KLAAGRAPGVDAARAAGPVGSAR
CCCCCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]