| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is 83720472
Identifier: 83720472
GI number: 83720472
Start: 3106841
End: 3108319
Strand: Direct
Name: 83720472
Synonym: BTH_I2713
Alternate gene names: NA
Gene position: 3106841-3108319 (Clockwise)
Preceding gene: 83720302
Following gene: 83720868
Centisome position: 81.56
GC content: 63.89
Gene sequence:
>1479_bases ATGACCAGGAACGCAAGACTCACATGGCAAGGGATCACCGGACTGATCGCGATATGCGCGGCCGCGCTCGCGACCCATCC TGCACGCGCCGACGTCGCCGCCGGACCGGGCGCATGGAGCAGCCAGCAAACGTGGGCCGCGGACACGGTCAACGGCGGCA ATCTGACCGGCTACTTCTATTGGCCCGCAACCCAGCCGACGACGCCCAACGGCAAGCGTGCGCTCGTGCTCGTGCTTCAC GGCTGCCAACAGAGCGCAGCCGGCGACGTCATCGACAATTCGCAAGGCGCGGGCTTCAACTGGAAGAACGTCGCCGATCG ATATGGCGCGATCATTCTGGCGCCCAACGCGACCGGAAACGTCTATAGCAACCATTGCTGGGACTATGCGAACACGTCGC CGAATCGCACGAGCGGCCATGTCGGCGTATTGCTCGATCTCATCGGTCGTTTCGTCGGCGACGCGCAGTATGCGATCGAT CCGAACCAGGTGTACGTGGCGGGCCTGTCTTCCGGTGGCGGCATGACGATGGTGCTCGGCTGCATCGCGCCGGACGTCTT CGCCGGCATCGGCATCAACGCCGGGCCGCCGCCCGGCACGACCACGCTACAAATCGGATACGTCCCGATCGGCTACACGG CGCAAACGGCGGCCAACCAGTGCAGGGCGTGGGCGGGCTCGAACGCGGGCAAGTTCTCGACTCAGATCGCCGGCGCCGTA TGGGGCACGTCGGACTATACCGTGGCCCAGGCGTATGGTCCGCTCGACACCGCCGCCTTTCGGCTCATCTATGGAGGCAC GTTTGCGCGGGGGGCCACAGTTTCCATTCCCGGCGGAGGCACGAACACGCCTTATACGGACAGCAACGGCAAAGTGCGCA CGCACGAGATCGTGGTTTCCGGCATGGCCCATGCCTGGCCTGCCGGCGCGGGCGGCAACAACACCCATTACGTGGACGCG ACGCACATCAACTATCCGGCCTTCGTGATGGACTACTGGGTCAGAAACAACTTACGCGCAAGCGCCGCGCCGACGCAGTC CGGCACTGCGCCGACAGGGCTGACCGTCACGGCCGCGACGCAGACGAGCGTGTCGCTGTCCTGGAACCCGGTCGCCGACG CGAGCAGCTACAACGTCTATCGAAACGGCGACAAGGTCGGGGCGTCGACGTCGACGGCCTACATCGATTCCGGCCTGATC GCCAGCACGACCTATTCCTATACGGTCACCGAGGTCGATCCGAGCGCGGGCGAGAGTGCGCAGTCCTCACCTGTATCGGC GACAACACAATCGAGTTTCGCCTGCACCGAGACGACGGCCACGAATTATGCGCACGTGCAGGCCGGCCGTGCATACGATT CATTCGGTATCGCCTACGCGGCCGGCTCGAACCAGAACATGGGGTTCGACAACGTGTTTTATGTGAATACGCTGGCGGAA ACGAAGGCCGGCTATTACATCATCGGCAATTGTCCGTGA
Upstream 100 bases:
>100_bases GAAGCGCGACAGATAAGCGAAGCCGTTGCATGAAAAGGCAGGACTGGGAAGCAAAAAGGCCGTGGGTATCGACACCATTC CCCATTCTAGGAGAGCCAGC
Downstream 100 bases:
>100_bases ATGCGGTGCACGTGATGTACCTGCGCGGGCATGATTCGCCCAGGTCGATCGACGGGGTGGTGTGATTTTGCGTAAGCGTG ATACGACAAGACCAGATCGA
Product: poly(3-hydroxybutyrate) depolymerase
Products: NA
Alternate protein names: PHB depolymerase [H]
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTRNARLTWQGITGLIAICAAALATHPARADVAAGPGAWSSQQTWAADTVNGGNLTGYFYWPATQPTTPNGKRALVLVLH GCQQSAAGDVIDNSQGAGFNWKNVADRYGAIILAPNATGNVYSNHCWDYANTSPNRTSGHVGVLLDLIGRFVGDAQYAID PNQVYVAGLSSGGGMTMVLGCIAPDVFAGIGINAGPPPGTTTLQIGYVPIGYTAQTAANQCRAWAGSNAGKFSTQIAGAV WGTSDYTVAQAYGPLDTAAFRLIYGGTFARGATVSIPGGGTNTPYTDSNGKVRTHEIVVSGMAHAWPAGAGGNNTHYVDA THINYPAFVMDYWVRNNLRASAAPTQSGTAPTGLTVTAATQTSVSLSWNPVADASSYNVYRNGDKVGASTSTAYIDSGLI ASTTYSYTVTEVDPSAGESAQSSPVSATTQSSFACTETTATNYAHVQAGRAYDSFGIAYAAGSNQNMGFDNVFYVNTLAE TKAGYYIIGNCP
Sequences:
>Translated_492_residues MTRNARLTWQGITGLIAICAAALATHPARADVAAGPGAWSSQQTWAADTVNGGNLTGYFYWPATQPTTPNGKRALVLVLH GCQQSAAGDVIDNSQGAGFNWKNVADRYGAIILAPNATGNVYSNHCWDYANTSPNRTSGHVGVLLDLIGRFVGDAQYAID PNQVYVAGLSSGGGMTMVLGCIAPDVFAGIGINAGPPPGTTTLQIGYVPIGYTAQTAANQCRAWAGSNAGKFSTQIAGAV WGTSDYTVAQAYGPLDTAAFRLIYGGTFARGATVSIPGGGTNTPYTDSNGKVRTHEIVVSGMAHAWPAGAGGNNTHYVDA THINYPAFVMDYWVRNNLRASAAPTQSGTAPTGLTVTAATQTSVSLSWNPVADASSYNVYRNGDKVGASTSTAYIDSGLI ASTTYSYTVTEVDPSAGESAQSSPVSATTQSSFACTETTATNYAHVQAGRAYDSFGIAYAAGSNQNMGFDNVFYVNTLAE TKAGYYIIGNCP >Mature_491_residues TRNARLTWQGITGLIAICAAALATHPARADVAAGPGAWSSQQTWAADTVNGGNLTGYFYWPATQPTTPNGKRALVLVLHG CQQSAAGDVIDNSQGAGFNWKNVADRYGAIILAPNATGNVYSNHCWDYANTSPNRTSGHVGVLLDLIGRFVGDAQYAIDP NQVYVAGLSSGGGMTMVLGCIAPDVFAGIGINAGPPPGTTTLQIGYVPIGYTAQTAANQCRAWAGSNAGKFSTQIAGAVW GTSDYTVAQAYGPLDTAAFRLIYGGTFARGATVSIPGGGTNTPYTDSNGKVRTHEIVVSGMAHAWPAGAGGNNTHYVDAT HINYPAFVMDYWVRNNLRASAAPTQSGTAPTGLTVTAATQTSVSLSWNPVADASSYNVYRNGDKVGASTSTAYIDSGLIA STTYSYTVTEVDPSAGESAQSSPVSATTQSSFACTETTATNYAHVQAGRAYDSFGIAYAAGSNQNMGFDNVFYVNTLAET KAGYYIIGNCP
Specific function: This protein degrades water-insoluble and water-soluble PHB to monomeric D(-)-3-hydroxybutyrate [H]
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fibronectin type-III domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010126 - InterPro: IPR008957 - InterPro: IPR003961 - InterPro: IPR013783 [H]
Pfam domain/function: PF00041 fn3 [H]
EC number: =3.1.1.75 [H]
Molecular weight: Translated: 50982; Mature: 50851
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRNARLTWQGITGLIAICAAALATHPARADVAAGPGAWSSQQTWAADTVNGGNLTGYFY CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEE WPATQPTTPNGKRALVLVLHGCQQSAAGDVIDNSQGAGFNWKNVADRYGAIILAPNATGN ECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCC VYSNHCWDYANTSPNRTSGHVGVLLDLIGRFVGDAQYAIDPNQVYVAGLSSGGGMTMVLG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCEEEEE CIAPDVFAGIGINAGPPPGTTTLQIGYVPIGYTAQTAANQCRAWAGSNAGKFSTQIAGAV HHCHHHHHCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEHEEEEEE WGTSDYTVAQAYGPLDTAAFRLIYGGTFARGATVSIPGGGTNTPYTDSNGKVRTHEIVVS ECCCCEEEEEECCCCHHHHEEEEECCCCCCCCEEEECCCCCCCCEECCCCCEEEEEEEEE GMAHAWPAGAGGNNTHYVDATHINYPAFVMDYWVRNNLRASAAPTQSGTAPTGLTVTAAT CCHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC QTSVSLSWNPVADASSYNVYRNGDKVGASTSTAYIDSGLIASTTYSYTVTEVDPSAGESA CEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEECCCEEEEEEEEEEEEEECCCCCCCC QSSPVSATTQSSFACTETTATNYAHVQAGRAYDSFGIAYAAGSNQNMGFDNVFYVNTLAE CCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEHHH TKAGYYIIGNCP CCCCEEEEECCC >Mature Secondary Structure TRNARLTWQGITGLIAICAAALATHPARADVAAGPGAWSSQQTWAADTVNGGNLTGYFY CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEE WPATQPTTPNGKRALVLVLHGCQQSAAGDVIDNSQGAGFNWKNVADRYGAIILAPNATGN ECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCC VYSNHCWDYANTSPNRTSGHVGVLLDLIGRFVGDAQYAIDPNQVYVAGLSSGGGMTMVLG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCEEEEE CIAPDVFAGIGINAGPPPGTTTLQIGYVPIGYTAQTAANQCRAWAGSNAGKFSTQIAGAV HHCHHHHHCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEHEEEEEE WGTSDYTVAQAYGPLDTAAFRLIYGGTFARGATVSIPGGGTNTPYTDSNGKVRTHEIVVS ECCCCEEEEEECCCCHHHHEEEEECCCCCCCCEEEECCCCCCCCEECCCCCEEEEEEEEE GMAHAWPAGAGGNNTHYVDATHINYPAFVMDYWVRNNLRASAAPTQSGTAPTGLTVTAAT CCHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC QTSVSLSWNPVADASSYNVYRNGDKVGASTSTAYIDSGLIASTTYSYTVTEVDPSAGESA CEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEECCCEEEEEEEEEEEEEECCCCCCCC QSSPVSATTQSSFACTETTATNYAHVQAGRAYDSFGIAYAAGSNQNMGFDNVFYVNTLAE CCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEHHH TKAGYYIIGNCP CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2644188; 1409594 [H]